ONTOLOGY REPORT - ANNOTATIONS


Term:liver benign neoplasm
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Accession:DOID:916 term browser browse the term
Definition:Tumors or cancer of the LIVER.
Synonyms:exact_synonym: Hepatic Neoplasm;   Hepatic Neoplasms;   epithelial hepatic and intrahepatic bile duct neoplasm;   liver neoplasms
 primary_id: MESH:D008113
 alt_id: RDO:0000702
For additional species annotation, visit the Alliance of Genome Resources.


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liver benign neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:11554173
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:11554173
G Acot1 acyl-CoA thioesterase 1 JBrowse link 6 107,485,088 107,493,082 RGD:11554173
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 JBrowse link 1 127,802,872 128,126,764 RGD:11554173
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:11554173
G Aldob aldolase, fructose-bisphosphate B JBrowse link 5 64,805,772 64,818,813 RGD:2313432
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:11554173
G Anxa4 annexin A4 JBrowse link 4 118,538,775 118,595,591 RGD:11554173
G Anxa7 annexin A7 JBrowse link 15 4,254,470 4,281,296 RGD:11554173
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:11554173
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:11554173
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:10755510
G Ash1l ASH1 like histone lysine methyltransferase JBrowse link 2 188,252,592 188,389,251 RGD:11554173
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:11554173
G Asns asparagine synthetase (glutamine-hydrolyzing) JBrowse link 4 33,742,876 33,761,106 RGD:11554173
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:11554173
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:11554173
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:11554173
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:11554173
G Btbd11 BTB domain containing 11 JBrowse link 7 24,041,194 24,314,418 RGD:11554173
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9587356
G Ccdc134 coiled-coil domain containing 134 JBrowse link 7 123,362,471 123,376,930 RGD:11554173
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:11554173
G Ccr4 C-C motif chemokine receptor 4 JBrowse link 8 122,530,152 122,535,959 RGD:11554173
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:13792775
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:11554173
G Cgref1 cell growth regulator with EF hand domain 1 JBrowse link 6 26,797,126 26,809,132 RGD:11554173
G Chn2 chimerin 2 JBrowse link 4 84,423,708 84,452,989 RGD:11554173
G Cidea cell death-inducing DFFA-like effector a JBrowse link 18 63,082,861 63,108,450 RGD:11554173
G Clstn2 calsyntenin 2 JBrowse link 8 105,322,577 106,036,821 RGD:11554173
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:5130894
G Cpt1b carnitine palmitoyltransferase 1B JBrowse link 7 130,395,211 130,404,731 RGD:11554173
G Crabp1 cellular retinoic acid binding protein 1 JBrowse link 8 59,344,097 59,352,135 RGD:11554173
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:11554173
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:11554173
G Dact2 dishevelled-binding antagonist of beta-catenin 2 JBrowse link 1 56,159,435 56,169,443 RGD:11554173
G Ddx54 DEAD-box helicase 54 JBrowse link 12 41,469,642 41,484,887 RGD:11554173
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:11554173
G Dpp10 dipeptidyl peptidase like 10 JBrowse link 13 39,430,590 41,173,706 RGD:11554173
G Efnb2 ephrin B2 JBrowse link 16 86,631,151 86,672,050 RGD:11554173
G Egln3 egl-9 family hypoxia-inducible factor 3 JBrowse link 6 75,050,329 75,075,795 RGD:11554173
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 JBrowse link 1 175,883,362 175,895,510 RGD:10755510
G Esm1 endothelial cell-specific molecule 1 JBrowse link 2 45,104,392 45,113,130 RGD:11554173
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:11554173
G Exosc2 exosome component 2 JBrowse link 3 10,151,734 10,161,997 RGD:11554173
G Fhit fragile histidine triad JBrowse link 15 15,697,292 16,862,873 RGD:11554173
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:11554173
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 80,214,691 80,221,417 RGD:11554173
G Fst follistatin JBrowse link 2 46,537,589 46,544,813 RGD:11554173
G Gadl1 glutamate decarboxylase-like 1 JBrowse link 8 123,989,822 124,301,366 RGD:11554173
G Gjb1 gap junction protein, beta 1 JBrowse link X 71,272,030 71,279,973 RGD:11554173
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:11554173
G Gpx2 glutathione peroxidase 2 JBrowse link 6 99,839,960 99,843,245 RGD:11554173
G Gpx3 glutathione peroxidase 3 JBrowse link 10 40,247,436 40,255,423 RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:11554173
G H2afx H2A histone family, member X JBrowse link 8 48,665,652 48,666,981 RGD:8693737
G Hcfc1 host cell factor C1 JBrowse link X 156,812,012 156,837,227 RGD:11554173
G Hebp2 heme binding protein 2 JBrowse link 1 13,713,152 13,719,970 RGD:11554173
G Herc3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 JBrowse link 4 89,078,670 89,169,150 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Higd2a HIG1 hypoxia inducible domain family, member 2A JBrowse link 17 10,558,714 10,559,638 RGD:11554173
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:11554173
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11554173
G Hsdl2 hydroxysteroid dehydrogenase like 2 JBrowse link 5 76,812,881 76,848,853 RGD:11554173
G Hspa4 heat shock protein family A (Hsp70) member 4 JBrowse link 10 38,601,624 38,642,397 RGD:5686872
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:11554173
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:11554173
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11049493
G Il12a interleukin 12A JBrowse link 2 165,076,945 165,083,996 RGD:11554173
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:11554173
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:11554173
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 JBrowse link 16 7,012,376 7,026,542 RGD:11554173
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:11554173
G Kmt5c lysine methyltransferase 5C JBrowse link 1 72,666,662 72,674,271 RGD:9586726
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Krt18 keratin 18 JBrowse link 7 143,629,455 143,633,131 RGD:11554173
G Krt8 keratin 8 JBrowse link 7 143,596,511 143,603,745 RGD:11554173
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 19 12,481,563 12,945,320 RGD:11554173
G Lingo2 leucine rich repeat and Ig domain containing 2 JBrowse link 5 51,466,367 51,638,161 RGD:11554173
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:11554173
G Macrod2 mono-ADP ribosylhydrolase 2 JBrowse link 3 135,729,839 136,422,082 RGD:11554173
G Map2k3 mitogen activated protein kinase kinase 3 JBrowse link 10 45,089,455 45,110,802 RGD:7495808
G Mapk14 mitogen activated protein kinase 14 JBrowse link 20 5,933,290 5,995,137 RGD:11554173
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:2317546
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:6893663
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:11554173
G Myo5b myosin Vb JBrowse link 18 70,426,865 70,729,985 RGD:11554173
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:11554173
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:11554173
G Ndrg1 N-myc downstream regulated 1 JBrowse link 7 107,734,326 107,775,701 RGD:11554173
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:11554173
G Nop16 NOP16 nucleolar protein JBrowse link 17 10,559,811 10,564,728 RGD:11554173
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:11035219
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:11554173
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 JBrowse link 13 89,585,072 89,591,278 RGD:11554173
G Nudcd3 NudC domain containing 3 JBrowse link 14 86,326,413 86,333,397 RGD:11554173
G Nudt7 nudix hydrolase 7 JBrowse link 19 46,455,745 46,470,070 RGD:11554173
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:11554173
G Pdrg1 p53 and DNA damage regulated 1 JBrowse link 3 148,487,056 148,493,225 RGD:11554173
G Phgdh phosphoglycerate dehydrogenase JBrowse link 2 200,484,245 200,513,564 RGD:11554173
G Pls1 plastin 1 JBrowse link 8 103,557,361 103,659,625 RGD:11554173
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:11554173
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:11554173
G Pqlc3 PQ loop repeat containing 3 JBrowse link 6 42,290,678 42,302,451 RGD:11554173
G Prickle2 prickle planar cell polarity protein 2 JBrowse link 4 124,238,167 124,584,176 RGD:11554173
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:11554173
G Psma4 proteasome subunit alpha 4 JBrowse link 8 59,532,456 59,539,916 RGD:11554173
G Pter phosphotriesterase related JBrowse link 17 80,250,444 80,311,987 RGD:11554173
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 4 171,250,766 171,461,571 RGD:11554173
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:11554173
G Rtp3 receptor (chemosensory) transporter protein 3 JBrowse link 8 119,260,609 119,265,501 RGD:11554173
G Scd stearoyl-CoA desaturase JBrowse link 1 264,159,966 264,173,061 RGD:11554173
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:11554173
G Six3 SIX homeobox 3 JBrowse link 6 8,886,730 8,891,094 RGD:11554173
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:11554173
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:11554173
G Slc38a9 solute carrier family 38, member 9 JBrowse link 2 44,512,556 44,592,793 RGD:11554173
G Slc40a1 solute carrier family 40 member 1 JBrowse link 9 52,819,451 52,830,461 RGD:11554173
G Snhg11 small nucleolar RNA host gene 11 JBrowse link 3 154,862,717 154,870,691 RGD:11554173
G Snx10 sorting nexin 10 JBrowse link 4 81,311,490 81,375,248 RGD:11554173
G Spata21 spermatogenesis associated 21 JBrowse link 5 159,612,541 159,638,073 RGD:11554173
G Srms src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites JBrowse link 3 176,709,742 176,716,146 RGD:11554173
G Stac3 SH3 and cysteine rich domain 3 JBrowse link 7 70,807,427 70,815,271 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Tcf4 transcription factor 4 JBrowse link 18 65,285,320 65,507,983 RGD:11554173
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11554173
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:11554173
G Tmem132d transmembrane protein 132D JBrowse link 12 31,934,343 32,607,768 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tnfsf10 TNF superfamily member 10 JBrowse link 2 113,008,008 113,026,899 RGD:11554173
G Tnk2 tyrosine kinase, non-receptor, 2 JBrowse link 11 71,348,726 71,388,520 RGD:11554173
G Tox3 TOX high mobility group box family member 3 JBrowse link 19 18,079,022 18,188,366 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Trio trio Rho guanine nucleotide exchange factor JBrowse link 2 80,471,398 80,769,313 RGD:11554173
G Ttc39a tetratricopeptide repeat domain 39A JBrowse link 5 129,024,505 129,083,226 RGD:11554173
G Ttll9 tubulin tyrosine ligase like 9 JBrowse link 3 148,426,008 148,485,370 RGD:11554173
G Ttpa alpha tocopherol transfer protein JBrowse link 5 34,007,926 34,029,315 RGD:1600436
G Tut4 terminal uridylyl transferase 4 JBrowse link 5 128,063,880 128,168,726 RGD:11530012
G Ugdh UDP-glucose 6-dehydrogenase JBrowse link 14 44,479,614 44,502,845 RGD:11554173
G Wdr17 WD repeat domain 17 JBrowse link 16 39,810,285 39,938,953 RGD:11554173
G Wscd1 WSC domain containing 1 JBrowse link 10 58,330,711 58,372,966 RGD:11554173
G Xpa XPA, DNA damage recognition and repair factor JBrowse link 5 61,749,767 61,793,641 RGD:11554173
G Xpc XPC complex subunit, DNA damage recognition and repair factor JBrowse link 4 123,134,457 123,161,985 RGD:11554173
G Yif1a Yip1 interacting factor homolog A, membrane trafficking protein JBrowse link 1 220,470,070 220,474,131 RGD:11554173
G Zdhhc2 zinc finger, DHHC-type containing 2 JBrowse link 16 54,932,546 55,002,322 RGD:11554173
G Zscan22 zinc finger and SCAN domain containing 22 JBrowse link 1 65,675,932 65,702,955 RGD:11554173
Experimental Liver Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb11 ATP binding cassette subfamily B member 11 JBrowse link 3 55,480,024 55,587,946 RGD:1598580
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:5684351
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:1598766
G Afp alpha-fetoprotein JBrowse link 14 19,141,755 19,159,919 RGD:11554173
G Agps alkylglycerone phosphate synthase JBrowse link 3 62,648,352 62,749,250 RGD:1598794
G Alas2 5'-aminolevulinate synthase 2 JBrowse link X 23,167,576 23,187,356 RGD:11554173
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:11554173
G Apoc2 apolipoprotein C2 JBrowse link 1 80,589,023 80,593,991 RGD:11554173
G Arrb2 arrestin, beta 2 JBrowse link 10 57,040,252 57,048,045 RGD:5509890
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:11554173
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:11554173
G Bak1 BCL2-antagonist/killer 1 JBrowse link 20 5,609,620 5,618,899 RGD:11554173
G Bbc3 Bcl-2 binding component 3 JBrowse link 1 78,261,491 78,267,802 RGD:11554173
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11554173
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:11353865
RGD:11554173
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 10 106,856,097 106,864,419 RGD:2293125
G Ca3 carbonic anhydrase 3 JBrowse link 2 88,126,519 88,136,063 RGD:11554173
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase JBrowse link 6 26,657,507 26,680,459 RGD:5132586
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:2315991
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:2289139
RGD:11554173
G Ccndbp1 cyclin D1 binding protein 1 JBrowse link 3 112,951,065 112,961,620 RGD:11554173
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5491179
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:11554173
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:8662309
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11554173
G Cps1 carbamoyl-phosphate synthase 1 JBrowse link 9 74,113,437 74,236,274 RGD:2303406
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:11554173
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:7296954
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:11554173
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 JBrowse link 1 147,236,480 147,307,988 RGD:11554173
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:11554173
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 JBrowse link 1 83,933,974 83,947,804 RGD:11554173
G Dhodh dihydroorotate dehydrogenase (quinone) JBrowse link 19 42,066,103 42,087,906 RGD:5132618
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:5133686
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:11252158
G F12 coagulation factor XII JBrowse link 17 9,736,577 9,744,420 RGD:11554173
G Foxm1 forkhead box M1 JBrowse link 4 161,685,236 161,697,633 RGD:11554173
G Gjb1 gap junction protein, beta 1 JBrowse link X 71,272,030 71,279,973 RGD:7349398
RGD:11554173
G Gjb2 gap junction protein, beta 2 JBrowse link 15 37,377,313 37,394,494 RGD:7349398
G Glul glutamate-ammonia ligase JBrowse link 13 71,331,052 71,340,207 RGD:11554173
G Grp gastrin releasing peptide JBrowse link 18 61,563,458 61,576,818 RGD:11554173
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:2317823
RGD:11554173
G H19 H19, imprinted maternally expressed transcript (non-protein coding) JBrowse link 1 215,744,404 215,747,080 RGD:1342455
G Hat1 histone acetyltransferase 1 JBrowse link 3 58,022,395 58,070,067 RGD:2316578
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11554173
G Htr2c 5-hydroxytryptamine receptor 2C JBrowse link X 118,084,520 118,318,040 RGD:1624998
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:10402567
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:2311623
RGD:2311630
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:11554173
G Kat6a lysine acetyltransferase 6A JBrowse link 16 73,942,669 74,020,750 RGD:2312274
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:2306052
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:11554173
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:11554173
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:11554173
G Mfge8 milk fat globule-EGF factor 8 protein JBrowse link 1 140,845,478 140,860,882 RGD:11554173
G Mir10a microRNA 10a JBrowse link 10 84,165,950 84,166,059 RGD:11554173
G Mir125a microRNA 125a JBrowse link 1 59,704,827 59,704,911 RGD:11554173
G Mir145 microRNA 145 JBrowse link 18 56,969,907 56,969,994 RGD:11554173
G Mir151 microRNA 151 JBrowse link 7 114,485,547 114,485,643 RGD:11554173
G Mir181c microRNA 181c JBrowse link 19 25,290,211 25,290,316 RGD:11554173
G Mir181d microRNA 181d JBrowse link 19 25,290,051 25,290,133 RGD:11554173
G Mir183 microRNA 183 JBrowse link 4 57,463,569 57,463,678 RGD:11554173
G Mir186 microRNA 186 JBrowse link 2 263,873,759 263,873,844 RGD:11554173
G Mir18a microRNA 18a JBrowse link 15 100,180,015 100,180,110 RGD:11554173
G Mir195 microRNA 195 JBrowse link 10 56,845,301 56,845,387 RGD:11554173
G Mir196b microRNA 196b JBrowse link 4 82,199,056 82,199,140 RGD:11554173
G Mir200b microRNA 200b JBrowse link 5 173,490,144 173,490,238 RGD:11554173
G Mir206 microRNA 206 JBrowse link 9 26,791,764 26,791,847 RGD:11554173
G Mir212 microRNA 212 JBrowse link 10 62,014,702 62,014,812 RGD:11554173
G Mir221 microRNA 221 JBrowse link X 3,684,480 3,684,588 RGD:11554173
G Mir26a microRNA 26a JBrowse link 8 127,714,441 127,714,530 RGD:11554173
G Mir26b microRNA 26b JBrowse link 9 81,675,275 81,675,359 RGD:11554173
G Mir290 microRNA 290 JBrowse link 1 64,538,705 64,538,785 RGD:11554173
G Mir300 microRNA 300 JBrowse link 6 133,874,152 133,874,230 RGD:11554173
G Mir301a microRNA 301a JBrowse link 10 74,417,746 74,417,845 RGD:11554173
G Mir30a microRNA 30a JBrowse link 9 29,542,635 29,542,705 RGD:11554173
G Mir30b microRNA 30b JBrowse link 7 109,282,662 109,282,747 RGD:11554173
G Mir30d microRNA 30d JBrowse link 7 109,286,463 109,286,544 RGD:11554173
G Mir30e microRNA 30e JBrowse link 5 139,702,872 139,702,963 RGD:11554173
G Mir324 microRNA 324 JBrowse link 10 56,621,126 56,621,208 RGD:11554173
G Mir331 microRNA 331 JBrowse link 7 34,881,095 34,881,190 RGD:11554173
G Mir336 microRNA 336 JBrowse link 10 35,349,756 35,349,851 RGD:11554173
G Mir339 microRNA 339 JBrowse link 12 17,369,002 17,369,097 RGD:11554173
G Mir349 microRNA 349 JBrowse link 7 130,146,518 130,146,614 RGD:11554173
G Mir34a microRNA 34a JBrowse link 5 167,092,491 167,092,592 RGD:11554173
G Mir383 microRNA 383 JBrowse link 16 57,519,675 57,519,748 RGD:11554173
G Mir409 microRNA 409 JBrowse link 6 133,893,419 133,893,495 RGD:11554173
G Mir429 microRNA 429 JBrowse link 5 173,488,331 173,488,415 RGD:11554173
G Mir598 microRNA 598 JBrowse link 15 47,057,496 47,057,574 RGD:11554173
G Mir652 microRNA 652 JBrowse link X 114,002,534 114,002,614 RGD:11554173
G Mir671 microRNA 671 JBrowse link 4 7,108,747 7,108,827 RGD:11554173
G Mir708 microRNA 708 JBrowse link 1 161,221,246 161,221,333 RGD:11554173
G Mir760 microRNA 760 JBrowse link 2 225,873,354 225,873,433 RGD:11554173
G Mir92b microRNA 92b JBrowse link 2 188,541,034 188,541,116 RGD:11554173
G Mir98 microRNA 98 JBrowse link X 21,583,875 21,583,982 RGD:11554173
G Mir99b microRNA 99b JBrowse link 1 59,704,216 59,704,285 RGD:11554173
G Mirlet7b microRNA let-7b JBrowse link 7 126,590,627 126,590,711 RGD:11554173
G Mirlet7d microRNA let-7d JBrowse link 17 16,419,980 16,420,077 RGD:11554173
G Mirlet7i microRNA let-7i JBrowse link 7 66,802,731 66,802,815 RGD:11554173
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2325736
RGD:2325734
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325736
RGD:2325734
G Mpeg1 macrophage expressed 1 JBrowse link 1 228,724,559 228,729,054 RGD:11554173
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:10059623
RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:2325277
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:2325310
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:13442478
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 JBrowse link 13 89,585,072 89,591,278 RGD:11554173
G Pemt phosphatidylethanolamine N-methyltransferase JBrowse link 10 46,339,821 46,404,640 RGD:1642378
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:11554173
G Ppat phosphoribosyl pyrophosphate amidotransferase JBrowse link 14 33,580,541 33,614,919 RGD:11554173
G Ppp2ca protein phosphatase 2 catalytic subunit alpha JBrowse link 10 37,534,449 37,554,861 RGD:8693574
G Prdx1 peroxiredoxin 1 JBrowse link 5 135,536,413 135,551,986 RGD:11554173
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:2292638
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:11554173
G Rgn regucalcin JBrowse link X 1,833,484 1,848,904 RGD:11554173
G Rida reactive intermediate imine deaminase A homolog JBrowse link 7 73,256,506 73,270,308 RGD:9685719
G Rras2 RAS related 2 JBrowse link 1 178,940,515 179,010,257 RGD:11554173
G Rrm1 ribonucleotide reductase catalytic subunit M1 JBrowse link 1 167,538,387 167,562,688 RGD:2316863
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1643105
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:1626391
G Slc31a1 solute carrier family 31 member 1 JBrowse link 5 78,222,504 78,249,358 RGD:11554173
G Socs1 suppressor of cytokine signaling 1 JBrowse link 10 4,956,795 4,958,472 RGD:11554173
G Sox4 SRY box 4 JBrowse link 17 37,615,022 37,619,728 RGD:11554173
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:11554173
G Sqle squalene epoxidase JBrowse link 7 99,609,929 99,624,803 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:11554173
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:2317490
RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11554173
G Tk1 thymidine kinase 1 JBrowse link 10 106,817,556 106,828,888 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Tsc22d1 TSC22 domain family, member 1 JBrowse link 15 58,554,358 58,658,156 RGD:11554173
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:6480440
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:13210515
Familial Hepatic Adenomas term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1a HNF1 homeobox A JBrowse link 12 47,407,811 47,433,342 RGD:8554872
RGD:7240710
hepatocellular adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:1358261
RGD:11554173
G Carm1 coactivator-associated arginine methyltransferase 1 JBrowse link 8 22,577,723 22,622,555 RGD:9586718
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cyp3a23/3a1 cytochrome P450, family 3, subfamily a, polypeptide 23/polypeptide 1 JBrowse link 12 11,053,888 11,082,742 RGD:11554173
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:1626391
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11568697
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 JBrowse link 13 89,585,072 89,591,278 RGD:11554173
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1302555
RGD:11554173
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:13592920
G Tmem70 transmembrane protein 70 JBrowse link 5 2,019,852 2,037,038 RGD:11554173
G Ube2e2 ubiquitin-conjugating enzyme E2E 2 JBrowse link 15 7,402,210 7,928,320 RGD:11554173

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14875
    disease of anatomical entity 14051
      endocrine system disease 4668
        liver disease 2270
          liver benign neoplasm 312
            Experimental Liver Neoplasms 173
            Familial Hepatic Adenomas 1
            Pascual Castroviejo Syndrome 0
            hemangioma of liver 0
            hepatic angiomyolipoma 0
            hepatocellular adenoma 13
            liver fibroma 0
            liver leiomyoma 0
            liver lipoma 0
Path 2
Term Annotations click to browse term
  disease 14875
    disease of anatomical entity 14051
      gastrointestinal system disease 4251
        Gastrointestinal Diseases 2349
          Gastrointestinal Neoplasms 1755
            gastrointestinal system benign neoplasm 401
              hepatobiliary benign neoplasm 375
                liver benign neoplasm 312
                  Experimental Liver Neoplasms 173
                  Familial Hepatic Adenomas 1
                  Pascual Castroviejo Syndrome 0
                  hemangioma of liver 0
                  hepatic angiomyolipoma 0
                  hepatocellular adenoma 13
                  liver fibroma 0
                  liver leiomyoma 0
                  liver lipoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.