FTP Download
Chinchilla Research Resource Database
   
Keyword
  

ONTOLOGY REPORT - ANNOTATIONS


Term:gastrointestinal stromal tumor
go back to main search page
Accession:DOID:9253 term browser browse the term
Definition:All tumors in the GASTROINTESTINAL TRACT arising from mesenchymal cells (MESODERM) except those of smooth muscle cells (LEIOMYOMA) or Schwann cells (SCHWANNOMA).
Synonyms:exact_synonym: GANT;   GIST;   Gastrointestinal Stromal Neoplasm;   Gastrointestinal Stromal Neoplasms;   Gastrointestinal Stromal Sarcoma;   Stromal tumor of gastrointestinal tract;   gastrointestinal stromal tumors
 narrow_synonym: GASTROINTESTINAL STROMAL TUMOR OF SMALL INTESTINE;   GASTROINTESTINAL STROMAL TUMOR, SOMATIC;   Gastrointestinal stromal tumor, familial;   SMALL INTESTINAL GASTROINTESTINAL STROMAL TUMOR
 primary_id: MESH:D046152;   RDO:0003371
 alt_id: OMIA:001516;   OMIM:606764
 xref: GARD:8598
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants       view all columns           Sort by:
 
gastrointestinal stromal tumor term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC, WNT signaling pathway regulator JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G B9d1 B9 domain containing 1 JBrowse link 10 47,784,294 47,794,399 RGD:11554173
G Bag6 BCL2-associated athanogene 6 JBrowse link 20 5,124,512 5,138,084 RGD:14390153
G Boc BOC cell adhesion associated, oncogene regulated JBrowse link 11 61,084,216 61,159,220 RGD:11554173
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:8554872
G C2cd3 C2 calcium-dependent domain containing 3 JBrowse link 1 165,382,279 165,480,088 RGD:11554173
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 14 71,895,128 71,979,452 RGD:11554173
G Cd3e CD3e molecule JBrowse link 8 49,297,604 49,309,370 RGD:11554173
G Cdon cell adhesion associated, oncogene regulated JBrowse link 8 36,625,757 36,712,091 RGD:11554173
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:11554173
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:8554872
G Disp1 dispatched RND transporter family member 1 JBrowse link 13 101,451,932 101,597,570 RGD:11554173
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:11554173
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 7 61,785,423 61,816,775 RGD:11554173
G Elp4 elongator acetyltransferase complex subunit 4 JBrowse link 3 95,733,810 95,954,987 RGD:11554173
G Folr1 folate receptor 1 JBrowse link 1 166,934,457 166,945,864 RGD:8554872
G Foxf1 forkhead box F1 JBrowse link 19 53,012,306 53,016,100 RGD:11554173
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:11554173
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:11554173
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:11554173
G Glis2 GLIS family zinc finger 2 JBrowse link 10 11,154,459 11,177,063 RGD:11554173
G Hhat hedgehog acyltransferase JBrowse link 13 111,235,325 111,489,075 RGD:11554173
G Hhip Hedgehog-interacting protein JBrowse link 19 31,525,134 31,614,487 RGD:11554173
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link 2 206,224,015 206,274,910 RGD:11554173
G Hipk2 homeodomain interacting protein kinase 2 JBrowse link 4 66,438,390 66,625,183 RGD:11554173
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:11554173
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:11554173
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:11554173
G Ihh Indian hedgehog signaling molecule JBrowse link 9 82,208,223 82,214,440 RGD:11554173
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:11554173
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:7240710
RGD:8554872
RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:8554872
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:8554872
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:8554872
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:8554872
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:8554872
G Ndst1 N-deacetylase and N-sulfotransferase 1 JBrowse link 18 55,951,497 56,014,107 RGD:11554173
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:11554173
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:11554173
G Padi2 peptidyl arginine deiminase 2 JBrowse link 5 159,428,479 159,471,113 RGD:8554872
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:7240710
RGD:8554872
RGD:11554173
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:11554173
G Ptch2 patched 2 JBrowse link 5 135,962,252 135,983,816 RGD:11554173
G Rab23 RAB23, member RAS oncogene family JBrowse link 9 38,469,784 38,496,185 RGD:11554173
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:11554173
G Rpl24 ribosomal protein L24 JBrowse link 11 47,116,885 47,122,093 RGD:11554173
G Sall3 spalt-like transcription factor 3 JBrowse link 18 77,572,200 77,591,710 RGD:11554173
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:7240710
RGD:8554872
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:7240710
RGD:8554872
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:8554872
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:8554872
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:11554173
G Stk36 serine/threonine kinase 36 JBrowse link 9 81,880,175 81,908,014 RGD:11554173
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 1 266,143,766 266,241,742 RGD:11554173
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:11554173
G Tmem17 transmembrane protein 17 JBrowse link 14 107,268,235 107,308,546 RGD:11554173
G Tmem231 transmembrane protein 231 JBrowse link 19 44,137,444 44,158,624 RGD:11554173
G Tulp3 tubby-like protein 3 JBrowse link 4 161,636,084 161,677,807 RGD:11554173
G Zbtb11 zinc finger and BTB domain containing 11 JBrowse link 11 47,079,201 47,113,993 RGD:11554173
Carney-Stratakis Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:7240710
RGD:8554872
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:7240710
RGD:8554872
G Sdhd succinate dehydrogenase complex subunit D JBrowse link 8 55,028,125 55,037,604 RGD:7240710
RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14759
    disease of cellular proliferation 5566
      cancer 3957
        organ system cancer 3768
          gastrointestinal system cancer 1056
            gastrointestinal stromal tumor 60
              Carney-Stratakis Syndrome 3
              Plexosarcoma 0
Path 2
Term Annotations click to browse term
  disease 14759
    disease of cellular proliferation 5566
      Neoplasms by Site 5012
        Digestive System Neoplasms 1883
          Gastrointestinal Neoplasms 1750
            gastrointestinal system cancer 1056
              gastrointestinal stromal tumor 60
                Carney-Stratakis Syndrome 3
                Plexosarcoma 0
paths to the root