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ONTOLOGY REPORT - ANNOTATIONS


Term:ubiquitin ligase complex
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Accession:GO:0000151 term browser browse the term
Definition:A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.


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ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARMC8 armadillo repeat containing 8 JBrowse link 3 135,214,895 135,328,235 RGD:9068941
G ASB1 ankyrin repeat and SOCS box containing 1 JBrowse link 2B 125,664,934 125,690,175 RGD:9068941
G ASB12 ankyrin repeat and SOCS box containing 12 JBrowse link X 53,348,975 53,443,379 RGD:9068941
G ASB2 ankyrin repeat and SOCS box containing 2 JBrowse link 14 74,566,607 74,608,905 RGD:9068941
G BMI1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 10 22,477,755 22,487,894 RGD:9068941
G BRAP BRCA1 associated protein JBrowse link 12 109,216,171 109,263,160 RGD:9068941
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 JBrowse link X 144,550,320 144,592,795 RGD:9068941
G CAND1 cullin associated and neddylation dissociated 1 JBrowse link 12 21,592,833 21,638,382 RGD:9068941
G CBX8 chromobox 8 JBrowse link 17 73,874,618 73,877,347 RGD:9068941
G CCNC cyclin C JBrowse link 6 97,383,290 97,410,068 RGD:9068941
G CDK8 cyclin dependent kinase 8 JBrowse link 13 7,546,922 7,698,079 RGD:9068941
G DCUN1D1 defective in cullin neddylation 1 domain containing 1 JBrowse link 3 179,969,744 180,016,270 RGD:9068941
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 12 21,241,325 21,260,321 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 5 68,336,673 68,474,481 RGD:9068941
G FBXO7 F-box protein 7 JBrowse link 22 13,481,255 13,505,301 RGD:9068941
G FBXO8 F-box protein 8 JBrowse link 4 166,462,626 166,509,875 RGD:9068941
G GID4 GID complex subunit 4 homolog JBrowse link 17 33,226,374 33,256,146 RGD:9068941
G GID8 GID complex subunit 8 homolog JBrowse link 20 59,325,193 59,335,588 RGD:9068941
G GPR37 G protein-coupled receptor 37 JBrowse link 7 116,727,912 116,751,647 RGD:9068941
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link X 143,988,720 144,010,078 RGD:9068941
G LOC100984949 F-box/LRR-repeat protein 12 JBrowse link 19 9,362,764 9,371,547 RGD:9068941
G MAEA macrophage erythroblast attacher, E3 ubiquitin ligase JBrowse link 4 1,432,848 1,485,764 RGD:9068941
G MED1 mediator complex subunit 1 JBrowse link 17 17,836,350 17,883,610 RGD:9068941
G MED10 mediator complex subunit 10 JBrowse link 5 6,695,045 6,701,703 RGD:9068941
G MED11 mediator complex subunit 11 JBrowse link 17 4,787,139 4,789,339 RGD:9068941
G MED12 mediator complex subunit 12 JBrowse link X 60,386,820 60,410,730 RGD:9068941
G MED17 mediator complex subunit 17 JBrowse link 11 88,806,209 88,835,138 RGD:9068941
G MED18 mediator complex subunit 18 JBrowse link 1 27,586,459 27,593,762 RGD:9068941
G MED20 mediator complex subunit 20 JBrowse link 6 41,489,079 41,504,572 RGD:9068941
G MED21 mediator complex subunit 21 JBrowse link 12 59,283,334 59,291,008 RGD:9068941
G MED23 mediator complex subunit 23 JBrowse link 6 129,386,301 129,428,120 RGD:9068941
G MED24 mediator complex subunit 24 JBrowse link 17 17,234,660 17,269,794 RGD:9068941
G MED27 mediator complex subunit 27 JBrowse link 9 102,982,174 103,199,512 RGD:9068941
G MED30 mediator complex subunit 30 JBrowse link 8 114,211,278 114,230,838 RGD:9068941
G MED31 mediator complex subunit 31 JBrowse link 17 6,681,675 6,689,115 RGD:9068941
G MED6 mediator complex subunit 6 JBrowse link 14 51,171,280 51,189,026 RGD:9068941
G MED7 mediator complex subunit 7 JBrowse link 5 152,540,081 152,545,657 RGD:9068941
G MIB2 mindbomb E3 ubiquitin protein ligase 2 JBrowse link 1 379,326 395,041 RGD:9068941
G MKLN1 muskelin 1 JBrowse link 7 123,075,319 123,463,509 RGD:9068941
G NEDD4 NEDD4 E3 ubiquitin protein ligase JBrowse link 15 34,798,880 34,963,823 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G RANBP10 RAN binding protein 10 JBrowse link 16 48,071,095 48,148,105 RGD:9068941
G RANBP9 RAN binding protein 9 JBrowse link 6 13,466,063 13,556,303 RGD:9068941
G RCHY1 ring finger and CHY zinc finger domain containing 1 JBrowse link 4 48,691,213 48,725,979 RGD:9068941
G RING1 ring finger protein 1 JBrowse link 6 32,780,699 32,784,922 RGD:9068941
G RMND5A required for meiotic nuclear division 5 homolog A JBrowse link 2A 86,768,106 86,826,000 RGD:9068941
G RNF11 ring finger protein 11 JBrowse link 1 50,480,862 50,517,676 RGD:9068941
G RNF168 ring finger protein 168 JBrowse link 3 193,814,785 193,848,620 RGD:9068941
G RNF2 ring finger protein 2 JBrowse link 1 160,568,438 160,626,783 RGD:9068941
G RNF20 ring finger protein 20 JBrowse link 9 72,738,132 72,767,868 RGD:9068941
G RNF40 ring finger protein 40 JBrowse link 16 24,194,293 24,207,460 RGD:9068941
G RNF8 ring finger protein 8 JBrowse link 6 36,918,705 36,955,380 RGD:9068941
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 JBrowse link 17 58,638,995 58,759,443 RGD:9068941
G STUB1 STIP1 homology and U-box containing protein 1 RGD:9068941
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link 9 32,314,850 32,327,067 RGD:9068941
G TRAF2 TNF receptor associated factor 2 JBrowse link 9 107,938,935 107,984,797 RGD:9068941
G TRAF7 TNF receptor associated factor 7 JBrowse link 16 1,013,831 1,036,486 RGD:9068941
G UBE2C ubiquitin conjugating enzyme E2 C JBrowse link 20 42,152,219 42,156,246 RGD:9068941
G UBE2D1 ubiquitin conjugating enzyme E2 D1 JBrowse link 10 54,867,346 54,903,125 RGD:9068941
G UBE2D2 ubiquitin conjugating enzyme E2 D2 JBrowse link 5 134,927,150 134,995,298 RGD:9068941
G UBE2E1 ubiquitin conjugating enzyme E2 E1 JBrowse link 3 23,719,632 23,803,302 RGD:9068941
G UBE2J2 ubiquitin conjugating enzyme E2 J2 JBrowse link 1 8,756 28,672 RGD:9068941
G UBE2N ubiquitin conjugating enzyme E2 N JBrowse link 12 90,951,446 90,984,075 RGD:9068941
G UBE2V1 ubiquitin conjugating enzyme E2 V1 JBrowse link 20 46,422,383 46,457,295 RGD:9068941
G UBE3D ubiquitin protein ligase E3D JBrowse link 6 80,729,751 80,962,322 RGD:9068941
G UBR1 ubiquitin protein ligase E3 component n-recognin 1 JBrowse link 15 21,899,611 22,064,606 RGD:9068941
G UBR2 ubiquitin protein ligase E3 component n-recognin 2 JBrowse link 6 42,150,409 42,282,486 RGD:9068941
G WDR26 WD repeat domain 26 JBrowse link 1 199,853,860 199,903,474 RGD:9068941
G YPEL5 yippee like 5 JBrowse link 2A 30,159,573 30,173,181 RGD:9068941
anaphase-promoting complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANAPC1 anaphase promoting complex subunit 1 JBrowse link 2A 90,143,737 90,262,215 RGD:9068941
G ANAPC10 anaphase promoting complex subunit 10 JBrowse link 4 137,339,959 137,445,172 RGD:9068941
G ANAPC11 anaphase promoting complex subunit 11 JBrowse link 17 76,297,262 76,305,826 RGD:9068941
G ANAPC13 anaphase promoting complex subunit 13 JBrowse link 3 131,524,227 131,532,624 RGD:9068941
G ANAPC15 anaphase promoting complex subunit 15 JBrowse link 11 67,186,653 67,193,102 RGD:9068941
G ANAPC16 anaphase promoting complex subunit 16 JBrowse link 10 68,738,800 68,758,677 RGD:9068941
G ANAPC2 anaphase promoting complex subunit 2 JBrowse link 9 108,234,949 108,248,227 RGD:9068941
G ANAPC4 anaphase promoting complex subunit 4 JBrowse link 4 19,777,750 19,817,459 RGD:9068941
G ANAPC5 anaphase promoting complex subunit 5 JBrowse link 12 118,906,482 118,950,913 RGD:9068941
G ANAPC7 anaphase promoting complex subunit 7 JBrowse link 12 107,946,756 107,977,489 RGD:9068941
G CDC16 cell division cycle 16 JBrowse link 13 95,300,763 95,340,762 RGD:9068941
G CDC20 cell division cycle 20 JBrowse link 1 42,660,338 42,664,618 RGD:9068941
G CDC23 cell division cycle 23 JBrowse link 5 133,566,022 133,591,528 RGD:9068941
G CDC26 cell division cycle 26 JBrowse link 9 84,364,810 84,373,406 RGD:9068941
G CDC27 cell division cycle 27 JBrowse link 17 10,259,194 10,331,011 RGD:9068941
G FZR1 fizzy and cell division cycle 20 related 1 JBrowse link 19 2,533,172 2,564,301 RGD:9068941
G MAD2L2 mitotic arrest deficient 2 like 2 JBrowse link 1 10,436,532 10,454,023 RGD:9068941
G UBE2C ubiquitin conjugating enzyme E2 C JBrowse link 20 42,152,219 42,156,246 RGD:9068941
G UBE2S ubiquitin conjugating enzyme E2 S JBrowse link 19 52,444,270 52,450,770 RGD:9068941
BCOR complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCOR BCL6 corepressor JBrowse link X 32,497,931 32,624,307 RGD:9068941
BRCA1-BARD1 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BARD1 BRCA1 associated RING domain 1 JBrowse link 2B 101,984,287 102,068,523 RGD:9068941
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 14,197,946 14,279,064 RGD:9068941
Cul2-RING ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 15 51,423,132 51,534,278 RGD:9068941
G ASB4 ankyrin repeat and SOCS box containing 4 JBrowse link 7 87,443,445 87,497,640 RGD:9068941
G COMMD1 copper metabolism domain containing 1 JBrowse link 2A 61,970,830 62,216,677 RGD:9068941
G CUL2 cullin 2 JBrowse link 10 35,127,771 35,210,108 RGD:9068941
G ELOB elongin B JBrowse link 16 1,631,179 1,637,114 RGD:9068941
G GLMN glomulin, FKBP associated protein JBrowse link 1 94,907,342 94,963,052 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G VHL von Hippel-Lindau tumor suppressor JBrowse link 3 10,077,630 10,089,499 RGD:9068941
G ZER1 zyg-11 related cell cycle regulator JBrowse link 9 99,853,433 99,895,399 RGD:9068941
G ZYG11B zyg-11 family member B, cell cycle regulator JBrowse link 1 51,987,678 52,087,093 RGD:9068941
Cul3-RING ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 15 51,423,132 51,534,278 RGD:9068941
G CUL3 cullin 3 JBrowse link 2B 111,714,533 111,827,080 RGD:9068941
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit JBrowse link 22 12,774,147 12,929,261 RGD:9068941
G ENC1 ectodermal-neural cortex 1 JBrowse link 5 40,668,899 40,682,887 RGD:9068941
G GAN gigaxonin JBrowse link 16 61,919,004 61,994,811 RGD:9068941
G GLMN glomulin, FKBP associated protein JBrowse link 1 94,907,342 94,963,052 RGD:9068941
G KBTBD8 kelch repeat and BTB domain containing 8 JBrowse link 3 66,903,965 66,916,924 RGD:9068941
G KCTD13 potassium channel tetramerization domain containing 13 RGD:9068941
G KCTD17 potassium channel tetramerization domain containing 17 JBrowse link 22 17,965,397 17,977,048 RGD:9068941
G KEAP1 kelch like ECH associated protein 1 JBrowse link 19 10,037,544 10,055,091 RGD:9068941
G KLHL12 kelch like family member 12 JBrowse link 1 178,490,467 178,527,919 RGD:9068941
G KLHL13 kelch like family member 13 JBrowse link X 106,904,105 107,122,969 RGD:9068941
G KLHL15 kelch like family member 15 JBrowse link X 16,583,117 16,625,029 RGD:9068941
G KLHL2 kelch like family member 2 JBrowse link 4 157,402,905 157,518,639 RGD:9068941
G KLHL20 kelch like family member 20 JBrowse link 1 149,232,858 149,303,357 RGD:9068941
G KLHL21 kelch like family member 21 JBrowse link 1 5,352,020 5,364,268 RGD:9068941
G KLHL22 kelch like family member 22 RGD:9068941
G KLHL24 kelch like family member 24 JBrowse link 3 180,669,767 180,731,186 RGD:9068941
G KLHL25 kelch like family member 25 JBrowse link 15 64,448,130 64,486,254 RGD:9068941
G KLHL3 kelch like family member 3 JBrowse link 5 133,005,563 133,276,087 RGD:9068941
G KLHL40 kelch like family member 40 JBrowse link 3 42,592,977 42,600,100 RGD:9068941
G KLHL41 kelch like family member 41 JBrowse link 2B 56,778,475 56,798,317 RGD:9068941
G KLHL42 kelch like family member 42 JBrowse link 12 58,509,031 58,531,891 RGD:9068941
G KLHL7 kelch like family member 7 JBrowse link 7 23,788,760 23,858,965 RGD:9068941
G KLHL8 kelch like family member 8 JBrowse link 4 79,462,540 79,522,547 RGD:9068941
G KLHL9 kelch like family member 9 JBrowse link 9 21,191,847 21,196,242 RGD:9068941
G LZTR1 leucine zipper like transcription regulator 1 JBrowse link 22 3,206,019 3,223,050 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 5 250,025 291,055 RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 1 30,913,773 30,929,066 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G SPOP speckle type BTB/POZ protein JBrowse link 17 43,685,913 43,765,277 RGD:9068941
G SPOPL speckle type BTB/POZ protein like JBrowse link 2B 21,280,143 21,351,547 RGD:9068941
G TNFAIP1 TNF alpha induced protein 1 JBrowse link 17 28,427,448 28,438,826 RGD:9068941
Cul4-RING E3 ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUL4A cullin 4A JBrowse link 13 94,350,484 94,409,183 RGD:9068941
G CUL4B cullin 4B JBrowse link X 109,798,279 109,870,469 RGD:9068941
G DCAF1 DDB1 and CUL4 associated factor 1 JBrowse link 3 51,326,589 51,430,217 RGD:9068941
G DCAF10 DDB1 and CUL4 associated factor 10 JBrowse link 9 37,649,415 37,716,577 RGD:9068941
G DCAF11 DDB1 and CUL4 associated factor 11 JBrowse link 14 4,890,956 4,900,296 RGD:9068941
G DCAF12 DDB1 and CUL4 associated factor 12 JBrowse link 9 33,923,900 33,964,443 RGD:9068941
G DCAF13 DDB1 and CUL4 associated factor 13 JBrowse link 8 100,070,628 100,098,885 RGD:9068941
G DCAF15 DDB1 and CUL4 associated factor 15 JBrowse link 19 13,514,672 13,523,689 RGD:9068941
G DCAF16 DDB1 and CUL4 associated factor 16 JBrowse link 4 12,222,332 12,232,487 RGD:9068941
G DCAF17 DDB1 and CUL4 associated factor 17 JBrowse link 2B 58,725,392 58,776,238 RGD:9068941
G DCAF4 DDB1 and CUL4 associated factor 4 JBrowse link 14 53,507,629 53,540,838 RGD:9068941
G DCAF5 DDB1 and CUL4 associated factor 5 JBrowse link 14 49,640,440 49,743,118 RGD:9068941
G DCAF6 DDB1 and CUL4 associated factor 6 JBrowse link 1 143,424,700 143,563,049 RGD:9068941
G DCAF7 DDB1 and CUL4 associated factor 7 JBrowse link 17 57,630,512 57,674,149 RGD:9068941
G DCAF8 DDB1 and CUL4 associated factor 8 JBrowse link 1 135,569,736 135,616,614 RGD:9068941
G DDA1 DET1 and DDB1 associated 1 JBrowse link 19 16,797,750 16,808,427 RGD:9068941
G DDB1 damage specific DNA binding protein 1 JBrowse link 11 56,599,422 56,633,140 RGD:9068941
G DDB2 damage specific DNA binding protein 2 JBrowse link 11 47,161,345 47,185,526 RGD:9068941
G DET1 DET1 partner of COP1 E3 ubiquitin ligase JBrowse link 15 67,203,101 67,238,185 RGD:9068941
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 187,603,600 187,672,006 RGD:9068941
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 5 53,053,712 53,131,563 RGD:9068941
G FBXW5 F-box and WD repeat domain containing 5 JBrowse link 9 107,998,949 108,003,247 RGD:9068941
Cul4A-RING E3 ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 15 51,423,132 51,534,278 RGD:9068941
G CDKN1B cyclin dependent kinase inhibitor 1B JBrowse link 12 12,742,258 12,747,404 RGD:9068941
G COP1 COP1 E3 ubiquitin ligase JBrowse link 1 151,459,354 151,727,131 RGD:9068941
G CRBN cereblon JBrowse link 3 3,091,328 3,121,364 RGD:9068941
G CUL4A cullin 4A JBrowse link 13 94,350,484 94,409,183 RGD:9068941
G DDB1 damage specific DNA binding protein 1 JBrowse link 11 56,599,422 56,633,140 RGD:9068941
G DET1 DET1 partner of COP1 E3 ubiquitin ligase JBrowse link 15 67,203,101 67,238,185 RGD:9068941
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 187,603,600 187,672,006 RGD:9068941
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 5 53,053,712 53,131,563 RGD:9068941
G GLMN glomulin, FKBP associated protein JBrowse link 1 94,907,342 94,963,052 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein JBrowse link 20 31,330,860 31,420,662 RGD:9068941
Cul4B-RING E3 ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUL4B cullin 4B JBrowse link X 109,798,279 109,870,469 RGD:9068941
G DDB1 damage specific DNA binding protein 1 JBrowse link 11 56,599,422 56,633,140 RGD:9068941
G DDB2 damage specific DNA binding protein 2 JBrowse link 11 47,161,345 47,185,526 RGD:9068941
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 187,603,600 187,672,006 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
Cul5-RING ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 3 48,844,161 48,910,183 RGD:9068941
G ASB2 ankyrin repeat and SOCS box containing 2 JBrowse link 14 74,566,607 74,608,905 RGD:9068941
G ASB4 ankyrin repeat and SOCS box containing 4 JBrowse link 7 87,443,445 87,497,640 RGD:9068941
G CUL5 cullin 5 JBrowse link 11 102,895,611 102,994,447 RGD:9068941
G ELOB elongin B JBrowse link 16 1,631,179 1,637,114 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G RNF7 ring finger protein 7 JBrowse link 3 138,772,581 138,780,763 RGD:9068941
Cul7-RING ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUL7 cullin 7 JBrowse link 6 42,629,158 42,646,279 RGD:9068941
G FBXW8 F-box and WD repeat domain containing 8 JBrowse link 12 114,487,476 114,607,384 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G SKP1 S-phase kinase associated protein 1 JBrowse link 5 129,560,086 129,580,188 RGD:9068941
cullin-RING ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CAND1 cullin associated and neddylation dissociated 1 JBrowse link 12 21,592,833 21,638,382 RGD:9068941
G CUL1 cullin 1 JBrowse link 7 140,428,442 140,531,136 RGD:9068941
G CUL9 cullin 9 JBrowse link 6 42,773,955 42,816,361 RGD:9068941
G GLMN glomulin, FKBP associated protein JBrowse link 1 94,907,342 94,963,052 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
cytoplasmic ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATG3 autophagy related 3 JBrowse link 3 109,681,163 109,710,835 RGD:9068941
Hrd1p ubiquitin ligase ERAD-L complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SEL1L SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link 14 62,050,695 62,111,489 RGD:9068941
G SYVN1 synoviolin 1 JBrowse link 11 60,489,626 60,496,945 RGD:9068941
HULC complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RNF20 ring finger protein 20 JBrowse link 9 72,738,132 72,767,868 RGD:9068941
G RNF40 ring finger protein 40 JBrowse link 16 24,194,293 24,207,460 RGD:9068941
G UBE2A ubiquitin conjugating enzyme E2 A JBrowse link X 108,606,271 108,617,000 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
LUBAC complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G OTULIN OTU deubiquitinase with linear linkage specificity JBrowse link 5 14,969,432 15,017,666 RGD:9068941
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 JBrowse link 20 615,987 639,366 RGD:9068941
G RNF31 ring finger protein 31 JBrowse link 14 4,923,391 4,936,959 RGD:9068941
G SHARPIN SHANK associated RH domain interactor JBrowse link 8 140,865,009 140,870,580 RGD:9068941
nuclear ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BABAM2 BRISC and BRCA1 A complex member 2 JBrowse link 2A 27,884,907 28,338,302 RGD:9068941
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 JBrowse link X 144,550,320 144,592,795 RGD:9068941
Parkin-FBXW7-Cul1 ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUL1 cullin 1 JBrowse link 7 140,428,442 140,531,136 RGD:9068941
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 144,660,676 144,874,404 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
PRC1 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMI1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 10 22,477,755 22,487,894 RGD:9068941
G CBX2 chromobox 2 JBrowse link 17 73,858,381 73,867,811 RGD:9068941
G CBX4 chromobox 4 JBrowse link 17 73,913,264 73,919,540 RGD:9068941
G CBX7 chromobox 7 JBrowse link 22 20,037,529 20,059,459 RGD:9068941
G CBX8 chromobox 8 JBrowse link 17 73,874,618 73,877,347 RGD:9068941
G PCGF2 polycomb group ring finger 2 JBrowse link 17 18,523,859 18,539,794 RGD:9068941
G PCGF6 polycomb group ring finger 6 JBrowse link 10 99,901,760 99,949,733 RGD:9068941
G PHC1 polyhomeotic homolog 1 JBrowse link 12 8,999,018 9,025,900 RGD:9068941
G PHC2 polyhomeotic homolog 2 JBrowse link 1 32,609,560 32,717,143 RGD:9068941
G PHC3 polyhomeotic homolog 3 JBrowse link 3 167,100,797 167,194,987 RGD:9068941
G RING1 ring finger protein 1 JBrowse link 6 32,780,699 32,784,922 RGD:9068941
G RNF2 ring finger protein 2 JBrowse link 1 160,568,438 160,626,783 RGD:9068941
SCF ubiquitin ligase complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 15 51,423,132 51,534,278 RGD:9068941
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 10 97,958,527 98,159,550 RGD:9068941
G CACYBP calcyclin binding protein JBrowse link 1 150,511,021 150,522,369 RGD:9068941
G CCNF cyclin F JBrowse link 16 1,285,379 1,314,972 RGD:9068941
G CUL1 cullin 1 JBrowse link 7 140,428,442 140,531,136 RGD:9068941
G FBH1 F-box DNA helicase 1 JBrowse link 10 5,931,389 5,978,844 RGD:9068941
G FBXL15 F-box and leucine rich repeat protein 15 JBrowse link 10 99,022,732 99,026,623 RGD:9068941
G FBXL17 F-box and leucine rich repeat protein 17 JBrowse link 5 103,214,110 103,739,494 RGD:9068941
G FBXL19 F-box and leucine rich repeat protein 19 JBrowse link 16 24,020,365 24,046,217 RGD:9068941
G FBXL2 F-box and leucine rich repeat protein 2 JBrowse link 3 33,199,436 33,308,831 RGD:9068941
G FBXL22 F-box and leucine rich repeat protein 22 JBrowse link 15 42,543,909 42,548,938 RGD:9068941
G FBXL3 F-box and leucine rich repeat protein 3 JBrowse link 13 58,219,260 58,244,780 RGD:9068941
G FBXL5 F-box and leucine rich repeat protein 5 JBrowse link 4 10,050,909 10,107,573 RGD:9068941
G FBXL7 F-box and leucine rich repeat protein 7 JBrowse link 5 15,804,479 16,237,326 RGD:9068941
G FBXO15 F-box protein 15 JBrowse link 18 67,455,924 67,529,959 RGD:9068941
G FBXO17 F-box protein 17 JBrowse link 19 36,041,892 36,075,757 RGD:9068941
G FBXO2 F-box protein 2 JBrowse link 1 10,408,853 10,415,174 RGD:9068941
G FBXO25 F-box protein 25 JBrowse link 8 6,931,217 6,995,138 RGD:9068941
G FBXO27 F-box protein 27 JBrowse link 19 36,113,773 36,133,009 RGD:9068941
G FBXO31 F-box protein 31 JBrowse link 16 67,997,481 68,053,081 RGD:9068941
G FBXO32 F-box protein 32 JBrowse link 8 120,192,822 120,236,116 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 5 68,336,673 68,474,481 RGD:9068941
G FBXO44 F-box protein 44 JBrowse link 1 10,414,856 10,436,406 RGD:9068941
G FBXO45 F-box protein 45 JBrowse link 3 193,913,712 193,934,123 RGD:9068941
G FBXO7 F-box protein 7 JBrowse link 22 13,481,255 13,505,301 RGD:9068941
G FBXO9 F-box protein 9 JBrowse link 6 52,621,036 52,652,980 RGD:9068941
G FBXW11 F-box and WD repeat domain containing 11 JBrowse link 5 167,207,643 167,354,730 RGD:9068941
G FBXW5 F-box and WD repeat domain containing 5 JBrowse link 9 107,998,949 108,003,247 RGD:9068941
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 144,660,676 144,874,404 RGD:9068941
G FBXW8 F-box and WD repeat domain containing 8 JBrowse link 12 114,487,476 114,607,384 RGD:9068941
G LOC100972235 putative F-box/LRR-repeat protein 21 JBrowse link 5 131,321,680 131,342,838 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G SIAH1 siah E3 ubiquitin protein ligase 1 JBrowse link 16 28,627,021 28,651,343 RGD:9068941
G SKP1 S-phase kinase associated protein 1 JBrowse link 5 129,560,086 129,580,188 RGD:9068941
G SKP2 S-phase kinase associated protein 2 JBrowse link 5 74,179,608 74,211,563 RGD:9068941
G TRIM21 tripartite motif containing 21 JBrowse link 11 4,588,083 4,596,942 RGD:9068941
G USP47 ubiquitin specific peptidase 47 JBrowse link 11 12,009,770 12,127,425 RGD:9068941
VCB complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUL2 cullin 2 JBrowse link 10 35,127,771 35,210,108 RGD:9068941
G ELOC elongin C JBrowse link 8 70,479,805 70,506,142 RGD:9068941
G LOC100994395 elongin-B JBrowse link 11 124,845,027 124,845,900 RGD:9068941
G NEURL2 neuralized E3 ubiquitin protein ligase 2 JBrowse link 20 42,227,450 42,230,096 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G VHL von Hippel-Lindau tumor suppressor JBrowse link 3 10,077,630 10,089,499 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12607
    intracellular 10572
      ubiquitin ligase complex 214
        BRE1 E3 ubiquitin ligase complex 0
        Dsc E3 ubiquitin ligase complex 0
        Fused-Smurf ubiquitin ligase complex 0
        HULC complex 4
        LUBAC complex 4
        Parkin-FBXW7-Cul1 ubiquitin ligase complex 3
        Rad6-Rad18 complex 0
        cullin-RING ubiquitin ligase complex + 127
        cytoplasmic ubiquitin ligase complex + 9
        nuclear ubiquitin ligase complex + 36
Path 2
Term Annotations click to browse term
  cellular_component 12607
    protein-containing complex 3912
      catalytic complex 1055
        transferase complex 593
          ubiquitin ligase complex 214
            BRE1 E3 ubiquitin ligase complex 0
            Dsc E3 ubiquitin ligase complex 0
            Fused-Smurf ubiquitin ligase complex 0
            HULC complex 4
            LUBAC complex 4
            Parkin-FBXW7-Cul1 ubiquitin ligase complex 3
            Rad6-Rad18 complex 0
            cullin-RING ubiquitin ligase complex + 127
            cytoplasmic ubiquitin ligase complex + 9
            nuclear ubiquitin ligase complex + 36
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.