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ONTOLOGY REPORT - ANNOTATIONS


Term:protein polyubiquitination
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Accession:GO:0000209 term browser browse the term
Definition:Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
Synonyms:exact_synonym: protein polyubiquitinylation;   protein polyubiquitylation
 related_synonym: polyubiquitin


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protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor ISO (PMID:24810856)
(PMID:17310145), (PMID:19103148)
ParkinsonsUK-UCL
UniProtKB
PMID:17310145, PMID:19103148, PMID:24810856 NCBI chr 6:29,366,812...29,417,800
Ensembl chr 6:29,366,624...29,413,703
JBrowse link
G ANKIB1 ankyrin repeat and IBR domain containing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:72,184,805...72,328,765
Ensembl chr 9:72,184,818...72,328,763
JBrowse link
G AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:97,893,182...97,940,932
Ensembl chr 7:97,875,220...97,940,902
JBrowse link
G ARFIP2 ADP ribosylation factor interacting protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:3,250,011...3,254,916
Ensembl chr 9:3,249,938...3,285,977
JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:60,707,483...60,824,117 JBrowse link
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:31,570,026...31,623,833
Ensembl chr13:31,570,088...31,625,226
JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 ISO (MGI:4830849|PMID:19300455) MGI PMID:19300455 MGI:4830849 NCBI chr 7:115,210,885...115,258,863
Ensembl chr 7:115,207,557...115,258,654
JBrowse link
G ATP5MG ATP synthase membrane subunit g IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:45,706,449...45,716,541
Ensembl chr 9:45,661,106...45,720,783
JBrowse link
G AXIN1 axin 1 ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chr 3:41,344,908...41,393,999
Ensembl chr 3:41,337,071...41,393,997
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO (PMID:16717086) MGI PMID:16717086 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G BFAR bifunctional apoptosis regulator ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chr 3:28,572,789...28,612,659
Ensembl chr 3:28,573,393...28,612,218
JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,003,570...33,020,252
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:12820959)
(MGI:1336762|PMID:10228155)
ParkinsonsUK-UCL
BHF-UCL
PMID:10228155, PMID:12820959 MGI:1336762 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,866...112,588,041
JBrowse link
G C14H10orf90 chromosome 14 C10orf90 homolog ISO (MGI:6201913|PMID:24240685) UniProt PMID:24240685 MGI:6201913 NCBI chr14:135,718,618...135,954,019
Ensembl chr14:135,718,623...135,954,334
JBrowse link
G CBFB core-binding factor subunit beta IEA Ensembl GO_REF:0000107 NCBI chr 6:27,684,320...27,750,856
Ensembl chr 6:27,684,030...27,776,751
JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:17675467 RGD:11576315 NCBI chr 9:46,416,937...46,512,855
Ensembl chr 9:46,404,999...46,512,834
JBrowse link
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:77,761,587...77,768,332
Ensembl chr 2:77,761,590...77,768,396
JBrowse link
G CHFR checkpoint with forkhead and ring finger domains IEA Ensembl GO_REF:0000107 NCBI chr14:22,654,462...22,683,970
Ensembl chr14:22,614,134...22,683,966
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G CUL3 cullin 3 IEA Ensembl GO_REF:0000107 NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,037
JBrowse link
G DCAF15 DDB1 and CUL4 associated factor 15 IEA Ensembl GO_REF:0000107 NCBI chr 2:65,205,657...65,213,514
Ensembl chr 2:65,205,657...65,213,518
JBrowse link
G DDA1 DET1 and DDB1 associated 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:60,367,168...60,376,986
Ensembl chr 2:60,367,165...60,379,450
JBrowse link
G DDB2 damage specific DNA binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:15,342,614...15,370,623
Ensembl chr 2:15,337,743...15,383,116
JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog IEA Ensembl GO_REF:0000107 NCBI chr 9:131,225,840...131,275,426
Ensembl chr 9:131,182,423...131,275,451
JBrowse link
G DZIP3 DAZ interacting zinc finger protein 3 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002, GO_REF:0000107 NCBI chr13:150,796,658...150,934,045
Ensembl chr13:150,795,520...150,934,027
JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:39,704,602...39,770,330
Ensembl chr16:39,701,701...39,770,315
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 IEA Ensembl GO_REF:0000107 NCBI chr 2:112,989,134...113,480,564
Ensembl chr 2:112,989,145...113,480,210
JBrowse link
G FBXL7 F-box and leucine rich repeat protein 7 IEA Ensembl GO_REF:0000107 NCBI chr16:4,784,452...5,194,193
Ensembl chr16:4,784,380...5,194,189
JBrowse link
G FBXO22 F-box protein 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:56,146,874...56,189,921
Ensembl chr 7:56,084,023...56,186,352
JBrowse link
G FBXO28 F-box protein 28 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:19,936,217...19,968,960
Ensembl chr10:19,936,244...19,968,960
JBrowse link
G FBXO4 F-box protein 4 IEA Ensembl GO_REF:0000107 NCBI chr16:26,707,470...26,751,134
Ensembl chr16:26,707,463...26,752,042
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 IEA Ensembl GO_REF:0000107 NCBI chr16:52,212,401...52,337,893
Ensembl chr16:52,212,655...52,337,913
JBrowse link
G G2E3 G2/M-phase specific E3 ubiquitin protein ligase ISO (MGI:3807157|PMID:18511420) MGI PMID:18511420 MGI:3807157 NCBI chr 7:68,854,410...68,917,070
Ensembl chr 7:68,852,774...68,917,029
JBrowse link
G HDAC6 histone deacetylase 6 ISO (MGI:2153694|PMID:11689694) MGI PMID:11689694 MGI:2153694 NCBI chr  X:42,917,911...42,941,894
Ensembl chr  X:42,917,960...42,941,890
JBrowse link
G HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:51,383,766...51,803,004
Ensembl chr18:51,387,836...51,802,945
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:46,281,958...46,444,315
Ensembl chr  X:46,282,415...46,441,623
JBrowse link
G IRF2BP1 interferon regulatory factor 2 binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:52,196,709...52,200,210
Ensembl chr 6:52,196,711...52,200,215
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,810,113...37,918,963
Ensembl chr17:37,810,183...37,918,208
JBrowse link
G JADE2 jade family PHD finger 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:136,686,056...136,832,004
Ensembl chr 2:136,788,372...136,832,003
JBrowse link
G KLHL42 kelch like family member 42 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:45,929,854...45,954,887
Ensembl chr 5:45,901,557...45,954,881
JBrowse link
G LOC100154647 ubiquitin-conjugating enzyme E2 N-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:26,025,808...26,044,787 JBrowse link
G LOC100155452 ubiquitin-conjugating enzyme E2 D3 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:84,339,329...84,339,781 JBrowse link
G LOC100525551 ubiquitin-conjugating enzyme E2 D2 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:70,732,012...70,732,489 JBrowse link
G LOC100622028 tripartite motif-containing protein 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,197,922...4,204,688
Ensembl chr 9:4,197,922...4,204,664
JBrowse link
G LOC100622859 baculoviral IAP repeat-containing protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,041,592...33,062,865
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G LOC100626899 ubiquitin-conjugating enzyme E2 E1 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:57,026,918...57,027,490 JBrowse link
G LOC100738479 tripartite motif-containing protein 34 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,175,660...4,188,528 JBrowse link
G LOC102160336 ubiquitin-conjugating enzyme E2 E1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:10,605,837...10,683,819 JBrowse link
G LOC106504368 butyrophilin subfamily 1 member A1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:24,680,986...24,712,081 JBrowse link
G LOC733579 tripartite motif protein TRIM5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:267,964,875...268,008,833
Ensembl chr 1:267,964,928...268,008,825
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 ISO RGD PMID:12049732 RGD:729224 NCBI chr16:35,872,301...35,947,097
Ensembl chr16:35,871,799...35,946,987
JBrowse link
G MARCHF1 membrane associated ring-CH-type finger 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:52,375,510...52,951,031 JBrowse link
G MARCHF5 membrane associated ring-CH-type finger 5 IEA Ensembl GO_REF:0000107 NCBI chr14:103,871,308...103,924,849
Ensembl chr14:103,871,310...103,927,876
JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:90,725,550...90,854,835
Ensembl chr14:90,725,583...90,854,826
JBrowse link
G MGRN1 mahogunin ring finger 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:37,694,798...37,748,106
Ensembl chr 3:37,689,708...37,748,068
JBrowse link
G MKRN1 makorin ring finger protein 1 IEA Ensembl GO_REF:0000107 NCBI chr18:9,333,637...9,358,854
Ensembl chr18:9,333,684...9,358,851
JBrowse link
G MUL1 mitochondrial E3 ubiquitin protein ligase 1 ISO (PMID:21597459) UniProt PMID:21597459 NCBI chr 6:78,747,687...78,758,821
Ensembl chr 6:78,747,649...78,758,813
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,937...116,070,317
JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:162,364,053...162,736,515
Ensembl chr 1:162,364,055...162,737,492
JBrowse link
G NFE2L1 nuclear factor, erythroid 2 like 1 IEA Ensembl GO_REF:0000107 NCBI chr12:24,303,381...24,316,765
Ensembl chr12:24,303,399...24,316,763
JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 ISO (PMID:15930137) UniProtKB PMID:15930137 NCBI chr 7:13,816,243...13,817,644
Ensembl chr 7:13,816,246...13,817,644
JBrowse link
G NHLRC3 NHL repeat containing 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:14,184,124...14,364,844
Ensembl chr11:14,184,090...14,381,617
JBrowse link
G P14ARF p14ARF protein ISO (PMID:18305112) UniProtKB PMID:18305112 NCBI chr 1:200,774,496...200,799,149
Ensembl chr 1:200,774,496...200,798,854
JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:77,740,460...77,796,911
Ensembl chr 3:77,658,664...77,796,916
JBrowse link
G PELI2 pellino E3 ubiquitin protein ligase family member 2 IEA InterPro GO_REF:0000002 NCBI chr 1:185,397,807...185,604,160
Ensembl chr 1:185,397,702...185,599,780
JBrowse link
G PELI3 pellino E3 ubiquitin protein ligase family member 3 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:5,950,552...5,959,786
Ensembl chr 2:5,947,962...5,959,731
JBrowse link
G PPIL2 peptidylprolyl isomerase like 2 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr14:50,206,807...50,232,845
Ensembl chr14:50,201,444...50,232,827
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO (PMID:12150907), (PMID:16227987), (PMID:18541373), (PMID:19880420)
(PMID:32047033)
ParkinsonsUK-UCL
UniProt
PMID:12150907, PMID:16227987, PMID:18541373, PMID:19880420, PMID:32047033 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G PRPF19 pre-mRNA processing factor 19 ISO (PMID:11435423) MGI PMID:11435423 NCBI chr 2:10,851,779...10,860,315
Ensembl chr 2:10,851,579...10,860,838
JBrowse link
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 ISO (PMID:12629548), (PMID:17006537) UniProtKB PMID:12629548, PMID:17006537 NCBI chr17:34,784,018...34,801,228
Ensembl chr17:34,784,016...34,801,231
JBrowse link
G RBX1 ring-box 1 ISO (PMID:14528312) UniProt PMID:14528312 NCBI chr 5:7,500,492...7,515,388 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,209,094...116,292,366
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:263,769,403...263,822,101
Ensembl chr 1:263,772,168...263,822,104
JBrowse link
G RNF111 ring finger protein 111 IEA Ensembl GO_REF:0000107 NCBI chr 1:112,961,466...113,059,606
Ensembl chr 1:112,961,412...113,059,543
JBrowse link
G RNF114 ring finger protein 114 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:51,513,646...51,527,783
Ensembl chr17:51,513,651...51,529,364
JBrowse link
G RNF125 ring finger protein 125 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:115,857,697...115,905,550
Ensembl chr 6:115,857,084...115,903,696
JBrowse link
G RNF135 ring finger protein 135 ISO (PMID:31006531)
(MGI:6152590|PMID:21147464)
UniProt PMID:21147464, PMID:31006531 MGI:6152590 NCBI chr12:42,793,755...42,808,937
Ensembl chr12:42,790,187...42,808,919
JBrowse link
G RNF14 ring finger protein 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:143,574,901...143,595,601
Ensembl chr 2:143,540,855...143,595,609
JBrowse link
G RNF165 ring finger protein 165 IEA Ensembl GO_REF:0000107 NCBI chr 1:95,951,387...96,072,522
Ensembl chr 1:95,951,414...96,066,949
JBrowse link
G RNF166 ring finger protein 166 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:976,957...982,997
Ensembl chr 6:976,977...983,198
JBrowse link
G RNF167 ring finger protein 167 ISO (PMID:16314844) UniProtKB PMID:16314844 NCBI chr12:51,966,028...51,970,811 JBrowse link
G RNF180 ring finger protein 180 IEA Ensembl
InterPro
GO_REF:0000002, GO_REF:0000107 NCBI chr16:42,686,225...42,951,928
Ensembl chr16:42,686,978...42,953,592
JBrowse link
G RNF183 ring finger protein 183 IEA Ensembl GO_REF:0000107 NCBI chr 1:253,924,122...253,966,702
Ensembl chr 1:253,925,677...253,966,703
JBrowse link
G RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:36,654,197...36,727,514
Ensembl chr 4:36,635,285...36,725,638
JBrowse link
G RNF19B ring finger protein 19B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:89,220,156...89,250,358
Ensembl chr 6:89,220,724...89,257,057
JBrowse link
G RNF20 ring finger protein 20 IEA Ensembl GO_REF:0000107 NCBI chr 1:243,225,711...243,254,465
Ensembl chr 1:243,225,924...243,254,446
JBrowse link
G RNF217 ring finger protein 217 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:37,784,359...37,912,122
Ensembl chr 1:37,788,472...37,912,122
JBrowse link
G RNF41 ring finger protein 41 IEA Ensembl GO_REF:0000107 NCBI chr 5:21,595,703...21,624,589
Ensembl chr 5:21,596,306...21,624,569
JBrowse link
G RUSC1 RUN and SH3 domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:94,489,202...94,499,993
Ensembl chr 4:94,489,208...94,514,739
JBrowse link
G SASH1 SAM and SH3 domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:17,306,364...17,663,117
Ensembl chr 1:17,306,372...17,662,825
JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:19,612,915...19,697,444
Ensembl chr 1:19,612,823...19,695,272
JBrowse link
G SKP1 S-phase kinase associated protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:136,458,772...136,476,364
Ensembl chr 2:136,458,949...136,476,005
JBrowse link
G SKP2 S-phase kinase associated protein 2 ISO (MGI:3768604|PMID:17785450) MGI PMID:17785450 MGI:3768604 NCBI chr16:21,463,270...21,500,925
Ensembl chr16:21,463,012...21,502,550
JBrowse link
G SLBP stem-loop binding protein IEA Ensembl GO_REF:0000107 NCBI chr 8:802,940...818,161
Ensembl chr 8:802,940...826,192
JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:6,037,732...6,142,569
Ensembl chr 3:6,037,737...6,142,576
JBrowse link
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:14,368,683...14,492,129
Ensembl chr12:14,368,256...14,489,017
JBrowse link
G SPOP speckle type BTB/POZ protein IEA Ensembl GO_REF:0000107 NCBI chr12:25,792,621...25,860,630
Ensembl chr12:25,792,626...25,860,712
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:41,092,514...41,095,181
Ensembl chr 3:41,092,447...41,095,136
JBrowse link
G TAF1 TATA-box binding protein associated factor 1 ISO (PMID:20181722) ParkinsonsUK-UCL PMID:20181722 NCBI chr  X:57,382,211...57,466,700 JBrowse link
G TMEM129 transmembrane protein 129, E3 ubiquitin ligase IEA Ensembl GO_REF:0000107 NCBI chr 8:819,762...826,233
Ensembl chr 8:802,940...826,192
JBrowse link
G TNKS tankyrase IEA Ensembl GO_REF:0000107 NCBI chr15:55,513,874...55,681,544
Ensembl chr15:55,514,254...55,681,504
JBrowse link
G TNKS2 tankyrase 2 IEA Ensembl GO_REF:0000107 NCBI chr14:103,396,424...103,461,830
Ensembl chr14:103,395,689...103,461,821
JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:33,865,967...33,878,135
Ensembl chr10:33,865,959...33,933,453
JBrowse link
G TRAF6 TNF receptor associated factor 6 ISO (PMID:15125833), (PMID:19675569) UniProtKB PMID:15125833, PMID:19675569 NCBI chr 2:24,602,749...24,628,263
Ensembl chr 2:24,602,783...24,626,072
JBrowse link
G TRIM21 tripartite motif containing 21 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,782,133...5,790,628
Ensembl chr 9:5,782,200...5,791,577
JBrowse link
G TRIM27 tripartite motif containing 27 IBA (PMID:21873635) GO_Central PMID:21873635
G TRIM3 tripartite motif containing 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:3,256,915...3,281,846
Ensembl chr 9:3,249,938...3,285,977
JBrowse link
G TRIM32 tripartite motif containing 32 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:257,051,421...257,066,911
Ensembl chr 1:257,054,227...257,066,910
JBrowse link
G TRIM38 tripartite motif containing 38 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:20,682,536...20,694,340
Ensembl chr 7:20,682,652...20,704,192
JBrowse link
G TRIM58 tripartite motif containing 58 IEA Ensembl GO_REF:0000107 NCBI chr 2:55,822,361...55,843,923
Ensembl chr 2:55,821,897...55,860,379
JBrowse link
G TRIM68 tripartite motif containing 68 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,502,931...5,516,936
Ensembl chr 9:5,502,988...5,510,779
JBrowse link
G TRIM71 tripartite motif containing 71 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,445...18,830,563
JBrowse link
G TRIML1 tripartite motif family like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:7,284,392...7,290,639
Ensembl chr17:7,283,658...7,290,639
JBrowse link
G TRIML2 tripartite motif family like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:7,310,656...7,326,072
Ensembl chr17:7,311,209...7,325,103
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 IEA Ensembl GO_REF:0000107 NCBI chr15:130,784,567...130,940,497
Ensembl chr15:130,787,581...130,939,575
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:97,925,136...98,007,551
Ensembl chr  X:97,925,131...98,013,194
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,784...136,667,949
JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534
JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:92,296,314...92,330,432
Ensembl chr14:92,294,642...92,382,213
JBrowse link
G UBE2D2 ubiquitin conjugating enzyme E2 D2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:141,397,937...141,459,821
Ensembl chr 2:141,398,065...141,459,817
JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:118,218,224...118,229,002
Ensembl chr 8:118,203,040...118,233,165
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:9,998,097...10,380,564
Ensembl chr13:9,998,176...10,380,564
JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:86,470,912...86,562,297
Ensembl chr15:86,471,150...86,577,725
JBrowse link
G UBE2F ubiquitin conjugating enzyme E2 F (putative) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:137,567,250...137,620,586 JBrowse link
G UBE2G1 ubiquitin conjugating enzyme E2 G1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:50,258,037...50,368,621
Ensembl chr12:50,167,957...50,348,689
JBrowse link
G UBE2G2 ubiquitin conjugating enzyme E2 G2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:207,444,529...207,471,826
Ensembl chr13:207,444,532...207,471,796
JBrowse link
G UBE2H ubiquitin conjugating enzyme E2 H IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:18,819,612...18,932,909
Ensembl chr18:18,819,639...18,932,908
JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:57,340,622...57,364,263
Ensembl chr 1:57,337,079...57,364,390
JBrowse link
G UBE2J2 ubiquitin conjugating enzyme E2 J2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:63,556,134...63,568,080
Ensembl chr 6:63,556,139...63,727,722
JBrowse link
G UBE2L3 ubiquitin conjugating enzyme E2 L3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:50,265,102...50,315,409 JBrowse link
G UBE2L6 ubiquitin conjugating enzyme E2 L6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:13,354,088...13,368,446
Ensembl chr 2:13,354,013...13,370,801
JBrowse link
G UBE2M ubiquitin conjugating enzyme E2 M IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:63,105,532...63,108,615
Ensembl chr 6:63,105,532...63,108,747
JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,673,306...89,716,345 JBrowse link
G UBE2Q1 ubiquitin conjugating enzyme E2 Q1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:95,221,149...95,229,533
Ensembl chr 4:95,220,867...95,229,533
JBrowse link
G UBE2QL1 ubiquitin conjugating enzyme E2 Q family like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:75,428,272...75,474,506
Ensembl chr16:75,428,275...75,474,044
JBrowse link
G UBE2R2 ubiquitin conjugating enzyme E2 R2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:32,894,424...33,014,473
Ensembl chr10:32,894,432...33,014,473
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
G UBE2U ubiquitin conjugating enzyme E2 U IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:148,233,498...148,314,193
Ensembl chr 6:148,233,412...148,305,330
JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:51,630,233...51,664,498
Ensembl chr17:51,629,964...51,666,701
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:79,621,343...79,652,502
Ensembl chr 4:79,419,358...79,652,471
JBrowse link
G UBE3B ubiquitin protein ligase E3B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:41,383,238...41,442,752
Ensembl chr14:41,383,240...41,442,477
JBrowse link
G UBE3C ubiquitin protein ligase E3C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:1,542,454...1,654,274
Ensembl chr18:1,542,163...1,653,982
JBrowse link
G UBE3D ubiquitin protein ligase E3D IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:83,140,479...83,295,865
Ensembl chr 1:83,140,474...83,366,841
JBrowse link
G UBE4A ubiquitination factor E4A ISO (MGI:2149486|PMID:11435423) MGI PMID:11435423 MGI:2149486 NCBI chr 9:45,661,090...45,701,911
Ensembl chr 9:45,645,292...45,704,745
JBrowse link
G UBE4B ubiquitination factor E4B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:70,345,789...70,462,434
Ensembl chr 6:70,345,813...70,462,434
JBrowse link
G UBOX5 U-box domain containing 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:32,520,612...32,561,534
Ensembl chr17:32,520,648...32,561,533
JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 ISO (PMID:21118991), (PMID:28689657) BHF-UCL PMID:21118991, PMID:28689657 NCBI chr 4:34,645,794...34,794,510
Ensembl chr 4:34,645,751...34,793,940
JBrowse link
G WWP1 WW domain containing E3 ubiquitin protein ligase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:50,370,072...50,509,314
Ensembl chr 4:50,370,088...50,509,113
JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,068,780...17,227,982
Ensembl chr 6:17,066,799...17,227,926
JBrowse link
G ZSWIM2 zinc finger SWIM-type containing 2 IEA Ensembl GO_REF:0000107 NCBI chr15:91,840,694...91,865,227
Ensembl chr15:91,840,974...91,864,190
JBrowse link
histone H2A K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMTR1 cap methyltransferase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:33,000,499...33,063,739
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
G RNF168 ring finger protein 168 ISO (PMID:20550933)
(PMID:19203578), (PMID:19203579), (PMID:19500350)
UniProtKB PMID:19203578, PMID:19203579, PMID:19500350, PMID:20550933 NCBI chr13:133,625,534...133,659,253 JBrowse link
G RNF8 ring finger protein 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:32,931,786...32,969,536
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
negative regulation of histone H2A K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:8,088,528...8,095,555
Ensembl chr 2:8,087,828...8,095,609
JBrowse link
G OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:115,304,809...115,326,055
Ensembl chr 7:115,304,870...115,327,056
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 IEA Ensembl GO_REF:0000107 NCBI chr15:130,784,567...130,940,497
Ensembl chr15:130,787,581...130,939,575
JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 IEA Ensembl GO_REF:0000107 NCBI chr 4:34,645,794...34,794,510
Ensembl chr 4:34,645,751...34,793,940
JBrowse link
negative regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPIA peptidylprolyl isomerase A ISO (PMID:30328013) UniProt PMID:30328013 NCBI chr18:50,563,130...50,566,857 JBrowse link
G TRIM44 tripartite motif containing 44 IEA Ensembl GO_REF:0000107 NCBI chr 2:25,275,193...25,378,738
Ensembl chr 2:25,247,505...25,378,565
JBrowse link
negative regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAAP1 caspase activity and apoptosis inhibitor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:196,229,512...196,273,770
Ensembl chr 1:196,176,256...196,274,058
JBrowse link
G GPS2 G protein pathway suppressor 2 IEA Ensembl GO_REF:0000107 NCBI chr12:52,664,869...52,667,643
Ensembl chr12:52,664,873...52,667,610
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 ISO (PMID:23575687) UniProtKB PMID:23575687 NCBI chr 4:688,511...695,808 JBrowse link
G PLAA phospholipase A2 activating protein IEA Ensembl GO_REF:0000107 NCBI chr 1:196,176,004...196,219,614
Ensembl chr 1:196,176,256...196,274,058
JBrowse link
negative regulation of protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYSF dysferlin IEA Ensembl GO_REF:0000107 NCBI chr 3:71,020,143...71,237,658
Ensembl chr 3:71,020,141...71,246,967
JBrowse link
G TTC36 tetratricopeptide repeat domain 36 ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chr 9:45,829,014...45,838,978
Ensembl chr 9:45,829,191...45,838,979
JBrowse link
positive regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC3 baculoviral IAP repeat containing 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,003,570...33,020,252
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G LOC100622859 baculoviral IAP repeat-containing protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,041,592...33,062,865
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G NMI N-myc and STAT interactor IEA Ensembl GO_REF:0000107 NCBI chr15:941,379...966,519
Ensembl chr15:941,505...965,443
JBrowse link
positive regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC3 baculoviral IAP repeat containing 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,003,570...33,020,252
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked IEA Ensembl GO_REF:0000107 NCBI chr  X:36,988,031...37,005,496
Ensembl chr  X:36,988,031...37,044,769
JBrowse link
G LOC100622859 baculoviral IAP repeat-containing protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,041,592...33,062,865
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:34,132,127...34,167,446
Ensembl chr 6:34,130,938...34,177,534
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:106,692,102...106,758,101
Ensembl chr 4:106,686,604...106,758,099
JBrowse link
positive regulation of protein linear polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G XIAP X-linked inhibitor of apoptosis IEA Ensembl GO_REF:0000107 NCBI chr  X:101,399,374...101,440,021
Ensembl chr  X:101,399,898...101,440,022
JBrowse link
positive regulation of protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC3 baculoviral IAP repeat containing 3 ISO (MGI:3819901|PMID:18621737) MGI PMID:18621737 MGI:3819901 NCBI chr 9:33,003,570...33,020,252
Ensembl chr 9:33,003,276...33,063,420
JBrowse link
G FBXO4 F-box protein 4 IEA Ensembl GO_REF:0000107 NCBI chr16:26,707,470...26,751,134
Ensembl chr16:26,707,463...26,752,042
JBrowse link
G HAMP hepcidin antimicrobial peptide ISO (PMID:22682227) BHF-UCL PMID:22682227 NCBI chr 6:44,785,863...44,787,303
Ensembl chr 6:44,784,159...44,787,307
JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 IEA Ensembl GO_REF:0000107 NCBI chr15:66,649,363...66,699,647
Ensembl chr15:66,649,049...66,700,433
JBrowse link
G RNF40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chr 3:17,622,309...17,635,990
Ensembl chr 3:17,622,319...17,639,900
JBrowse link
G SKP2 S-phase kinase associated protein 2 ISO (MGI:5468878|PMID:23277542) MGI PMID:23277542 MGI:5468878 NCBI chr16:21,463,270...21,500,925
Ensembl chr16:21,463,012...21,502,550
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 IEA Ensembl GO_REF:0000107 NCBI chr13:81,849,908...81,926,764
Ensembl chr13:81,867,740...81,926,762
JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 IEA Ensembl GO_REF:0000107 NCBI chr14:92,296,314...92,330,432
Ensembl chr14:92,294,642...92,382,213
JBrowse link
protein K11-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANAPC1 anaphase promoting complex subunit 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 3:44,483,961...44,605,035
Ensembl chr 3:44,509,692...44,605,014
JBrowse link
G ANAPC10 anaphase promoting complex subunit 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:83,353,217...83,497,570 JBrowse link
G ANAPC11 anaphase promoting complex subunit 11 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chr12:1,095,091...1,099,233 JBrowse link
G ANAPC13 anaphase promoting complex subunit 13 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:75,599,797...75,605,667
Ensembl chr13:75,599,800...75,605,140
JBrowse link
G ANAPC2 anaphase promoting complex subunit 2 IEA Ensembl GO_REF:0000107
G ANAPC4 anaphase promoting complex subunit 4 IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr 8:19,301,253...19,341,463
Ensembl chr 8:19,301,248...19,341,478
JBrowse link
G ANAPC5 anaphase promoting complex subunit 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:31,259,695...31,306,434
Ensembl chr14:31,259,727...31,306,442
JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 IEA Ensembl GO_REF:0000107 NCBI chr14:31,744,729...31,789,750
Ensembl chr14:31,742,649...31,789,743
JBrowse link
G CDC16 cell division cycle 16 IEA Ensembl GO_REF:0000107 NCBI chr11:79,084,243...79,111,758
Ensembl chr11:79,084,176...79,115,331
JBrowse link
G CDC23 cell division cycle 23 IEA Ensembl GO_REF:0000107 NCBI chr 2:140,211,334...140,245,728
Ensembl chr 2:140,211,336...140,230,793
JBrowse link
G CDC26 cell division cycle 26 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:253,893,666...253,906,659
Ensembl chr 1:253,895,885...253,906,632
JBrowse link
G CDC27 cell division cycle 27 IEA Ensembl GO_REF:0000107 NCBI chr12:16,810,868...16,882,271
Ensembl chr12:16,810,910...16,882,269
JBrowse link
G LOC100155452 ubiquitin-conjugating enzyme E2 D3 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:84,339,329...84,339,781 JBrowse link
G LOC100525551 ubiquitin-conjugating enzyme E2 D2 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:70,732,012...70,732,489 JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G RNF26 ring finger protein 26 IEA Ensembl GO_REF:0000107 NCBI chr 9:46,543,732...46,546,570
Ensembl chr 9:46,543,735...46,546,569
JBrowse link
G RNF4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 8:1,353,532...1,380,637
Ensembl chr 8:1,353,236...1,380,637
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A IEA Ensembl GO_REF:0000107 NCBI chr  X:97,925,136...98,007,551
Ensembl chr  X:97,925,131...98,013,194
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IEA Ensembl GO_REF:0000107 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,784...136,667,949
JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C IEA Ensembl GO_REF:0000107 NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534
JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:118,218,224...118,229,002
Ensembl chr 8:118,203,040...118,233,165
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:9,998,097...10,380,564
Ensembl chr13:9,998,176...10,380,564
JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:86,470,912...86,562,297
Ensembl chr15:86,471,150...86,577,725
JBrowse link
G UBE2H ubiquitin conjugating enzyme E2 H IEA Ensembl GO_REF:0000107 NCBI chr18:18,819,612...18,932,909
Ensembl chr18:18,819,639...18,932,908
JBrowse link
G UBE2L3 ubiquitin conjugating enzyme E2 L3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:50,265,102...50,315,409 JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S IEA Ensembl GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IEA Ensembl GO_REF:0000107 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
G UBE2W ubiquitin conjugating enzyme E2 W ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chr 4:62,046,568...62,084,679
Ensembl chr 4:62,014,257...62,098,402
JBrowse link
protein K27-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF6 ring finger protein 6 IEA Ensembl GO_REF:0000107 NCBI chr11:4,020,752...4,033,040
Ensembl chr11:4,017,443...4,032,164
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IEA Ensembl GO_REF:0000107 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S IEA Ensembl GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IEA Ensembl GO_REF:0000107 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
protein K29-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITCH itchy E3 ubiquitin protein ligase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:37,810,113...37,918,963
Ensembl chr17:37,810,183...37,918,208
JBrowse link
G RNF186 ring finger protein 186 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:78,195,692...78,199,058
Ensembl chr 6:78,192,337...78,198,597
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IEA Ensembl GO_REF:0000107 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S IEA Ensembl GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IEA Ensembl GO_REF:0000107 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
protein K33-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL20 kelch like family member 20 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:116,005,562...116,083,478
Ensembl chr 9:115,987,477...116,083,460
JBrowse link
protein K48-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:29,366,812...29,417,800
Ensembl chr 6:29,366,624...29,413,703
JBrowse link
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 IEA Ensembl GO_REF:0000107 NCBI chr13:31,570,026...31,623,833
Ensembl chr13:31,570,088...31,625,226
JBrowse link
G BFAR bifunctional apoptosis regulator IEA Ensembl GO_REF:0000107 NCBI chr 3:28,572,789...28,612,659
Ensembl chr 3:28,573,393...28,612,218
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,866...112,588,041
JBrowse link
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme IEA Ensembl GO_REF:0000107 NCBI chr 2:77,761,587...77,768,332
Ensembl chr 2:77,761,590...77,768,396
JBrowse link
G CMTR1 cap methyltransferase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:33,000,499...33,063,739
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
G CUL1 cullin 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:109,454,523...109,559,114
Ensembl chr 9:109,454,534...109,557,649
JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L IEA Ensembl GO_REF:0000107 NCBI chr13:137,950,266...137,961,381
Ensembl chr13:137,950,272...137,961,343
JBrowse link
G FBXO22 F-box protein 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:56,146,874...56,189,921
Ensembl chr 7:56,084,023...56,186,352
JBrowse link
G FBXO38 F-box protein 38 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:149,674,300...149,722,875
Ensembl chr 2:149,674,448...149,722,871
JBrowse link
G HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:70,994,033...71,104,998
Ensembl chr 1:70,993,341...71,105,012
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr17:37,810,113...37,918,963
Ensembl chr17:37,810,183...37,918,208
JBrowse link
G KLHL3 kelch like family member 3 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:139,632,868...139,890,079
Ensembl chr 2:139,632,870...139,920,497
JBrowse link
G LOC100155452 ubiquitin-conjugating enzyme E2 D3 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:84,339,329...84,339,781 JBrowse link
G LOC100525551 ubiquitin-conjugating enzyme E2 D2 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:70,732,012...70,732,489 JBrowse link
G LOC100626899 ubiquitin-conjugating enzyme E2 E1 pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:57,026,918...57,027,490 JBrowse link
G LOC102160336 ubiquitin-conjugating enzyme E2 E1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:10,605,837...10,683,819 JBrowse link
G MARCHF6 membrane associated ring-CH-type finger 6 IEA Ensembl GO_REF:0000107 NCBI chr16:72,043,294...72,127,869
Ensembl chr16:72,044,869...72,127,864
JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:162,364,053...162,736,515
Ensembl chr 1:162,364,055...162,737,492
JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:77,740,460...77,796,911
Ensembl chr 3:77,658,664...77,796,916
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G RBX1 ring-box 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:7,500,492...7,515,388 JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:40,075,259...40,151,034 JBrowse link
G RNF115 ring finger protein 115 IEA Ensembl GO_REF:0000107 NCBI chr 4:99,493,172...99,577,946
Ensembl chr 4:99,493,481...99,573,564
JBrowse link
G RNF126 ring finger protein 126 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,673,302...77,683,312
Ensembl chr 2:77,673,353...77,683,301
JBrowse link
G RNF146 ring finger protein 146 IEA Ensembl GO_REF:0000107 NCBI chr 1:35,909,789...35,927,265
Ensembl chr 1:35,909,575...35,926,968
JBrowse link
G RNF152 ring finger protein 152 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:159,529,879...159,606,031
Ensembl chr 1:159,530,623...159,601,981
JBrowse link
G RNF187 ring finger protein 187 ISO (PMID:20852630) UniProtKB PMID:20852630 NCBI chr 2:51,647,478...51,692,453
Ensembl chr 2:51,643,015...51,671,539
JBrowse link
G RNF216 ring finger protein 216 IEA Ensembl GO_REF:0000107 NCBI chr 3:4,158,447...4,329,458
Ensembl chr 3:4,158,448...4,329,386
JBrowse link
G RNF34 ring finger protein 34 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:31,202,030...31,229,529
Ensembl chr14:31,200,373...31,229,484
JBrowse link
G RNF4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 8:1,353,532...1,380,637
Ensembl chr 8:1,353,236...1,380,637
JBrowse link
G RNF5 ring finger protein 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,703...24,217,972
JBrowse link
G RNF6 ring finger protein 6 IEA Ensembl GO_REF:0000107 NCBI chr11:4,020,752...4,033,040
Ensembl chr11:4,017,443...4,032,164
JBrowse link
G RNF8 ring finger protein 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:32,931,786...32,969,536
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
G SKP1 S-phase kinase associated protein 1 ISO (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chr 2:136,458,772...136,476,364
Ensembl chr 2:136,458,949...136,476,005
JBrowse link
G SKP2 S-phase kinase associated protein 2 IEA Ensembl GO_REF:0000107 NCBI chr16:21,463,270...21,500,925
Ensembl chr16:21,463,012...21,502,550
JBrowse link
G SYVN1 synoviolin 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,072,809
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:26,474,158...26,489,771
Ensembl chr 1:26,473,938...26,489,822
JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase IEA Ensembl GO_REF:0000107 NCBI chr10:33,865,967...33,878,135
Ensembl chr10:33,865,959...33,933,453
JBrowse link
G TRIM32 tripartite motif containing 32 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:257,051,421...257,066,911
Ensembl chr 1:257,054,227...257,066,910
JBrowse link
G TRIM38 tripartite motif containing 38 IEA Ensembl GO_REF:0000107 NCBI chr 7:20,682,536...20,694,340
Ensembl chr 7:20,682,652...20,704,192
JBrowse link
G TTC3 tetratricopeptide repeat domain 3 IEA Ensembl GO_REF:0000107 NCBI chr13:200,695,624...200,821,920
Ensembl chr13:200,694,616...200,821,912
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A IEA Ensembl GO_REF:0000107 NCBI chr  X:97,925,136...98,007,551
Ensembl chr  X:97,925,131...98,013,194
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IEA Ensembl GO_REF:0000107 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,784...136,667,949
JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C IEA Ensembl GO_REF:0000107 NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534
JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr14:92,296,314...92,330,432
Ensembl chr14:92,294,642...92,382,213
JBrowse link
G UBE2D2 ubiquitin conjugating enzyme E2 D2 IEA Ensembl GO_REF:0000107 NCBI chr 2:141,397,937...141,459,821
Ensembl chr 2:141,398,065...141,459,817
JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 8:118,218,224...118,229,002
Ensembl chr 8:118,203,040...118,233,165
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:9,998,097...10,380,564
Ensembl chr13:9,998,176...10,380,564
JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:86,470,912...86,562,297
Ensembl chr15:86,471,150...86,577,725
JBrowse link
G UBE2G1 ubiquitin conjugating enzyme E2 G1 IEA Ensembl GO_REF:0000107 NCBI chr12:50,258,037...50,368,621
Ensembl chr12:50,167,957...50,348,689
JBrowse link
G UBE2G2 ubiquitin conjugating enzyme E2 G2 IEA Ensembl GO_REF:0000107 NCBI chr13:207,444,529...207,471,826
Ensembl chr13:207,444,532...207,471,796
JBrowse link
G UBE2H ubiquitin conjugating enzyme E2 H IEA Ensembl GO_REF:0000107 NCBI chr18:18,819,612...18,932,909
Ensembl chr18:18,819,639...18,932,908
JBrowse link
G UBE2K ubiquitin conjugating enzyme E2 K IEA Ensembl GO_REF:0000107 NCBI chr 8:30,887,784...30,961,685
Ensembl chr 8:30,887,829...30,963,762
JBrowse link
G UBE2Q2 ubiquitin conjugating enzyme E2 Q2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chr 7:56,084,017...56,144,915
Ensembl chr 7:56,084,023...56,186,352
JBrowse link
G UBE2R2 ubiquitin conjugating enzyme E2 R2 IEA Ensembl GO_REF:0000107 NCBI chr10:32,894,424...33,014,473
Ensembl chr10:32,894,432...33,014,473
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IEA Ensembl GO_REF:0000107 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
G UBE3A ubiquitin protein ligase E3A IEA UniProt GO_REF:0000104 NCBI chr 1:141,887,179...142,001,595
Ensembl chr 1:141,887,168...141,997,241
JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 IEA Ensembl GO_REF:0000107 NCBI chr 4:34,645,794...34,794,510
Ensembl chr 4:34,645,751...34,793,940
JBrowse link
G ZNRF1 zinc and ring finger 1 ISO (MGI:5306704|PMID:22057101) UniProt PMID:22057101 MGI:5306704 NCBI chr 6:12,555,655...12,668,807 JBrowse link
protein K6-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARD1 BRCA1 associated RING domain 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:117,049,483...117,135,889
Ensembl chr15:117,047,839...117,175,851
JBrowse link
G BRCA1 BRCA1 DNA repair associated IEA UniProt GO_REF:0000104 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,855,570
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G RNF4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 8:1,353,532...1,380,637
Ensembl chr 8:1,353,236...1,380,637
JBrowse link
G RNF6 ring finger protein 6 IEA Ensembl GO_REF:0000107 NCBI chr11:4,020,752...4,033,040
Ensembl chr11:4,017,443...4,032,164
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IEA Ensembl GO_REF:0000107 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S IEA Ensembl GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IEA Ensembl GO_REF:0000107 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 IEA Ensembl GO_REF:0000107 NCBI chr13:31,570,026...31,623,833
Ensembl chr13:31,570,088...31,625,226
JBrowse link
G BFAR bifunctional apoptosis regulator IEA Ensembl GO_REF:0000107 NCBI chr 3:28,572,789...28,612,659
Ensembl chr 3:28,573,393...28,612,218
JBrowse link
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:68,318,167...68,422,403
Ensembl chr 7:68,318,417...68,422,396
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:37,810,113...37,918,963
Ensembl chr17:37,810,183...37,918,208
JBrowse link
G LOC100154647 ubiquitin-conjugating enzyme E2 N-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:26,025,808...26,044,787 JBrowse link
G LOC733579 tripartite motif protein TRIM5 ISO (PMID:21512573) UniProtKB PMID:21512573 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G MAGEL2 MAGE family member L2 IEA Ensembl GO_REF:0000107 NCBI chr 1:142,450,414...142,454,633
Ensembl chr 1:142,448,689...142,454,697
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase ISO PMID:20159449 UniProt PMID:20159449 RGD:8554407 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,937...116,070,317
JBrowse link
G P14ARF p14ARF protein ISO (PMID:18305112) UniProtKB PMID:18305112 NCBI chr 1:200,774,496...200,799,149
Ensembl chr 1:200,774,496...200,798,854
JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:77,740,460...77,796,911
Ensembl chr 3:77,658,664...77,796,916
JBrowse link
G PELI3 pellino E3 ubiquitin protein ligase family member 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:5,950,552...5,959,786
Ensembl chr 2:5,947,962...5,959,731
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G PRPF19 pre-mRNA processing factor 19 IEA Ensembl GO_REF:0000107 NCBI chr 2:10,851,779...10,860,315
Ensembl chr 2:10,851,579...10,860,838
JBrowse link
G RNF115 ring finger protein 115 IEA Ensembl GO_REF:0000107 NCBI chr 4:99,493,172...99,577,946
Ensembl chr 4:99,493,481...99,573,564
JBrowse link
G RNF126 ring finger protein 126 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,673,302...77,683,312
Ensembl chr 2:77,673,353...77,683,301
JBrowse link
G RNF135 ring finger protein 135 IEA Ensembl GO_REF:0000107 NCBI chr12:42,793,755...42,808,937
Ensembl chr12:42,790,187...42,808,919
JBrowse link
G RNF152 ring finger protein 152 IEA Ensembl GO_REF:0000107 NCBI chr 1:159,529,879...159,606,031
Ensembl chr 1:159,530,623...159,601,981
JBrowse link
G RNF168 ring finger protein 168 ISO (PMID:22266820) UniProtKB PMID:22266820 NCBI chr13:133,625,534...133,659,253 JBrowse link
G RNF186 ring finger protein 186 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:78,195,692...78,199,058
Ensembl chr 6:78,192,337...78,198,597
JBrowse link
G RNF4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 8:1,353,532...1,380,637
Ensembl chr 8:1,353,236...1,380,637
JBrowse link
G RNF5 ring finger protein 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,703...24,217,972
JBrowse link
G RNF8 ring finger protein 8 IEA UniProt GO_REF:0000104 NCBI chr 7:32,931,786...32,969,536
Ensembl chr 7:32,931,786...33,063,739
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:41,092,514...41,095,181
Ensembl chr 3:41,092,447...41,095,136
JBrowse link
G TRAF1 TNF receptor associated factor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:260,948,191...260,973,978
Ensembl chr 1:260,949,111...260,973,709
JBrowse link
G TRAF2 TNF receptor associated factor 2 IBA (PMID:21873635) GO_Central PMID:21873635
G TRAF3 TNF receptor associated factor 3 IBA (PMID:21873635) GO_Central PMID:21873635
G TRAF3IP2 TRAF3 interacting protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:77,483,997...77,541,557
Ensembl chr 1:77,480,926...77,541,210
JBrowse link
G TRAF4 TNF receptor associated factor 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:44,975,639...44,981,650
Ensembl chr12:44,975,632...44,987,104
JBrowse link
G TRAF5 TNF receptor associated factor 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:131,772,810...131,822,555
Ensembl chr 9:131,775,447...131,822,530
JBrowse link
G TRAF6 TNF receptor associated factor 6 ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 2:24,602,749...24,628,263
Ensembl chr 2:24,602,783...24,626,072
JBrowse link
G TRIM27 tripartite motif containing 27 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107
G TRIM56 tripartite motif containing 56 ISO (MGI:4849871|PMID:21074459) UniProt PMID:21074459 MGI:4849871 NCBI chr 3:8,834,260...8,842,524
Ensembl chr 3:8,834,143...8,839,415
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B IEA Ensembl GO_REF:0000107 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,784...136,667,949
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:48,735,258...48,756,314
Ensembl chr18:48,733,366...48,756,291
JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:9,998,097...10,380,564
Ensembl chr13:9,998,176...10,380,564
JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:86,470,912...86,562,297
Ensembl chr15:86,471,150...86,577,725
JBrowse link
G UBE2G1 ubiquitin conjugating enzyme E2 G1 IEA Ensembl GO_REF:0000107 NCBI chr12:50,258,037...50,368,621
Ensembl chr12:50,167,957...50,348,689
JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:89,673,306...89,716,345 JBrowse link
G UBE2O ubiquitin conjugating enzyme E2 O IEA Ensembl GO_REF:0000107 NCBI chr12:5,055,091...5,114,127
Ensembl chr12:5,055,065...5,114,123
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S IEA Ensembl GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T IEA Ensembl GO_REF:0000107 NCBI chr10:24,454,492...24,459,085
Ensembl chr10:24,454,495...24,459,057
JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:51,630,233...51,664,498
Ensembl chr17:51,629,964...51,666,701
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:79,621,343...79,652,502
Ensembl chr 4:79,419,358...79,652,471
JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,068,780...17,227,982
Ensembl chr 6:17,066,799...17,227,926
JBrowse link
G ZFP91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase ISO (PMID:20682767) UniProtKB PMID:20682767 NCBI chr 2:12,495,548...12,532,281 JBrowse link
protein linear polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:34,784,018...34,801,228
Ensembl chr17:34,784,016...34,801,231
JBrowse link
G SHARPIN SHANK associated RH domain interactor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:600,698...605,711
Ensembl chr 4:600,698...605,702
JBrowse link
regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SASH1 SAM and SH3 domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:17,306,364...17,663,117
Ensembl chr 1:17,306,372...17,662,825
JBrowse link
regulation of protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF2 forkhead box F2 IEA Ensembl GO_REF:0000107 NCBI chr 7:715,001...719,781
Ensembl chr 7:714,850...719,267
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16552
    metabolic process 10502
      cellular metabolic process 9459
        cellular macromolecule metabolic process 7274
          cellular protein metabolic process 4539
            cellular protein modification process 3490
              protein modification by small protein conjugation or removal 884
                protein modification by small protein conjugation 766
                  protein ubiquitination 714
                    protein polyubiquitination 230
                      negative regulation of protein polyubiquitination + 12
                      positive regulation of protein polyubiquitination + 15
                      protein K11-linked ubiquitination 29
                      protein K27-linked ubiquitination 4
                      protein K29-linked ubiquitination 5
                      protein K33-linked ubiquitination 1
                      protein K48-linked ubiquitination + 66
                      protein K6-linked ubiquitination 8
                      protein K63-linked ubiquitination + 60
                      protein linear polyubiquitination + 4
                      protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process 0
                      regulation of protein polyubiquitination + 29
Path 2
Term Annotations click to browse term
  biological_process 16552
    metabolic process 10502
      organic substance metabolic process 9939
        macromolecule metabolic process 8603
          protein metabolic process 5125
            protein modification process 3490
              cellular protein modification process 3490
                protein modification by small protein conjugation or removal 884
                  protein modification by small protein conjugation 766
                    protein ubiquitination 714
                      protein polyubiquitination 230
                        negative regulation of protein polyubiquitination + 12
                        positive regulation of protein polyubiquitination + 15
                        protein K11-linked ubiquitination 29
                        protein K27-linked ubiquitination 4
                        protein K29-linked ubiquitination 5
                        protein K33-linked ubiquitination 1
                        protein K48-linked ubiquitination + 66
                        protein K6-linked ubiquitination 8
                        protein K63-linked ubiquitination + 60
                        protein linear polyubiquitination + 4
                        protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process 0
                        regulation of protein polyubiquitination + 29
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.