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ONTOLOGY REPORT - ANNOTATIONS


Term:protein polyubiquitination
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Accession:GO:0000209 term browser browse the term
Definition:Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
Synonyms:exact_synonym: protein polyubiquitinylation;   protein polyubiquitylation
 related_synonym: polyubiquitin


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protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor ISO (PMID:24810856)
(PMID:17310145), (PMID:19103148)
ParkinsonsUK-UCL
UniProtKB
PMID:17310145, PMID:19103148, PMID:24810856 NCBI chrNW_004936475:8,692,969...8,727,252 JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 ISO (PMID:16118314), (PMID:19340006) UniProtKB PMID:16118314, PMID:19340006 NCBI chrNW_004936529:648,661...713,616 JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 ISO (MGI:4830849|PMID:19300455) MGI PMID:19300455 MGI:4830849 NCBI chrNW_004936733:1,813,569...1,849,805 JBrowse link
G Axin1 axin 1 ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004936501:599,963...633,837 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (PMID:16717086) MGI PMID:16717086 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Bfar bifunctional apoptosis regulator ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004936501:2,811,967...2,839,357 JBrowse link
G Birc2 baculoviral IAP repeat containing 2 ISO (PMID:11907583) UniProtKB PMID:11907583 NCBI chrNW_004936551:5,515,904...5,535,864 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:12820959)
(MGI:1336762|PMID:10228155)
ParkinsonsUK-UCL
BHF-UCL
PMID:10228155, PMID:12820959 MGI:1336762 NCBI chrNW_004936600:4,215,219...4,424,498 JBrowse link
G Cbfb core-binding factor subunit beta ISO (PMID:22190036) CACAO PMID:22190036 NCBI chrNW_004936475:17,537,273...17,589,383 JBrowse link
G Cbl Cbl proto-oncogene ISO RGD PMID:17675467 RGD:11576315 NCBI chrNW_004936542:4,136,389...4,235,746 JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme ISO (PMID:20347421) UniProtKB PMID:20347421 NCBI chrNW_004936588:160,066...167,259 JBrowse link
G Chfr checkpoint with forkhead and ring finger domains ISO (PMID:19182791)
(MGI:3575445|PMID:15793587)
UniProtKB
MGI
PMID:15793587, PMID:19182791 MGI:3575445 NCBI chrNW_004936660:2,725,019...2,754,564 JBrowse link
G Ctnnb1 catenin beta 1 ISO (PMID:29374064) UniProt PMID:29374064 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Cul3 cullin 3 ISO (PMID:14528312), (PMID:19261606)
(MGI:5806303|PMID:27708159)
UniProt
MGI
PMID:14528312, PMID:19261606, PMID:27708159 MGI:5806303 NCBI chrNW_004936569:6,067,230...6,131,467 JBrowse link
G CUNH10orf90 chromosome unknown C10orf90 homolog ISO (MGI:6201913|PMID:24240685) UniProt PMID:24240685 MGI:6201913 NCBI chrNW_004936486:14,311,976...14,499,733 JBrowse link
G Dcaf15 DDB1 and CUL4 associated factor 15 ISO (PMID:28302793), (PMID:28437394), (PMID:31452512), (PMID:31686031) UniProt PMID:28302793, PMID:28437394, PMID:31452512, PMID:31686031 NCBI chrNW_004936659:2,656,072...2,663,237 JBrowse link
G Dda1 DET1 and DDB1 associated 1 ISO (PMID:31686031) UniProt PMID:31686031 NCBI chrNW_004936596:3,545,669...3,554,134 JBrowse link
G Ddb2 damage specific DNA binding protein 2 ISO (PMID:12732143) UniProtKB PMID:12732143 NCBI chrNW_004936562:1,960,406...1,974,809 JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog ISO (PMID:18794347) UniProtKB PMID:18794347 NCBI chrNW_004936557:1,347,991...1,389,836 JBrowse link
G Dzip3 DAZ interacting zinc finger protein 3 ISO (PMID:12538761) UniProtKB PMID:12538761 NCBI chrNW_004936645:2,261,977...2,360,354 JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ISO (PMID:12732143) UniProtKB PMID:12732143 NCBI chrNW_004936480:7,560,055...7,609,650 JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 ISO (PMID:27234298) UniProt PMID:27234298 NCBI chrNW_004936531:2,674,319...3,179,325 JBrowse link
G Fbxl7 F-box and leucine rich repeat protein 7 ISO (PMID:25778398)
(MGI:6368091|PMID:25778398)
(PMID:28218735)
UniProt PMID:25778398, PMID:28218735 MGI:6368091 NCBI chrNW_004936665:605,225...973,735 JBrowse link
G Fbxo22 F-box protein 22 ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004936471:36,232,749...36,255,772 JBrowse link
G Fbxo4 F-box protein 4 ISO (PMID:16275645), (PMID:20181953) UniProtKB PMID:16275645, PMID:20181953 NCBI chrNW_004936518:855,304...873,927 JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 ISO (PMID:20347421)
(MGI:2176150|PMID:11896578)
UniProtKB
UniProt
PMID:11896578, PMID:20347421 MGI:2176150 NCBI chrNW_004936609:3,256,658...3,341,918 JBrowse link
G G2e3 G2/M-phase specific E3 ubiquitin protein ligase ISO (MGI:3807157|PMID:18511420) MGI PMID:18511420 MGI:3807157 NCBI chrNW_004936494:5,352,126...5,409,648 JBrowse link
G Hdac6 histone deacetylase 6 ISO (MGI:2153694|PMID:11689694) MGI PMID:11689694 MGI:2153694 NCBI chrNW_004936721:757,500...778,416 JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ISO (PMID:15989957) UniProtKB PMID:15989957 NCBI chrNW_004936751:478,978...622,818 JBrowse link
G Irf2bp1 interferon regulatory factor 2 binding protein 1 ISO (PMID:18671972) ARUK-UCL PMID:18671972 NCBI chrNW_004936706:2,210,882...2,213,432 JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO (MGI:3038342|PMID:14973438) MGI PMID:14973438 MGI:3038342 NCBI chrNW_004936561:6,140,236...6,265,734 JBrowse link
G Jade2 jade family PHD finger 2 ISO (MGI:5605922|PMID:25018020) MGI PMID:25018020 MGI:5605922 NCBI chrNW_004936647:740,689...795,252 JBrowse link
G Klhl42 kelch like family member 42 ISO (PMID:19261606) UniProtKB PMID:19261606 NCBI chrNW_004936760:5,049...27,134 JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 ISO (PMID:18077552) UniProtKB PMID:18077552 NCBI chrNW_004936487:15,181,009...15,217,952 JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO RGD PMID:12049732 RGD:729224 NCBI chrNW_004936480:11,082,811...11,156,691 JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (PMID:19117940)
(MGI:3703462|PMID:17255932)
(PMID:27577745)
UniProtKB
UniProt
CACAO
PMID:17255932, PMID:19117940, PMID:27577745 MGI:3703462 NCBI chrNW_004936555:1,810,896...2,097,870 JBrowse link
G Marchf5 membrane associated ring-CH-type finger 5 ISO (PMID:16936636) UniProtKB PMID:16936636 NCBI chrNW_004936601:2,401,016...2,435,093 JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 ISO (PMID:19117940) UniProtKB PMID:19117940 NCBI chrNW_004936728:27,658...32,174 JBrowse link
G Mgrn1 mahogunin ring finger 1 ISO (MGI:2449384|PMID:12560552) MGI PMID:12560552 MGI:2449384 NCBI chrNW_004936530:4,647,550...4,693,143 JBrowse link
G Mkrn1 makorin ring finger protein 1 ISO (PMID:19536131) FlyBase PMID:19536131 NCBI chrNW_004936592:4,533,142...4,539,599 JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 ISO (PMID:21597459) UniProt PMID:21597459 NCBI chrNW_004936474:6,479,640...6,486,080 JBrowse link
G Nfe2l1 nuclear factor, erythroid 2 like 1 ISO (MGI:5433806|PMID:21554501) MGI PMID:21554501 MGI:5433806 NCBI chrNW_004936490:13,265,269...13,279,164 JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 ISO (PMID:15930137) UniProtKB PMID:15930137 NCBI chrNW_004936552:3,891,350...3,893,566 JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (MGI:5291872|PMID:21874024) MGI PMID:21874024 MGI:5291872 NCBI chrNW_004936491:8,985,074...9,040,863 JBrowse link
G Ppil2 peptidylprolyl isomerase like 2 ISO (PMID:11435423) MGI PMID:11435423 NCBI chrNW_004936619:1,983,602...2,026,494 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:12150907), (PMID:16227987), (PMID:18541373), (PMID:19880420)
(PMID:32047033)
ParkinsonsUK-UCL
UniProt
PMID:12150907, PMID:16227987, PMID:18541373, PMID:19880420, PMID:32047033 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO (PMID:11435423) MGI PMID:11435423 NCBI chrNW_004936581:2,031,894...2,042,294 JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 ISO (PMID:12629548), (PMID:17006537) UniProtKB PMID:12629548, PMID:17006537 NCBI chrNW_004936485:18,057,569...18,071,787 JBrowse link
G Rbx1 ring-box 1 ISO (PMID:14528312) UniProt PMID:14528312 NCBI chrNW_004936492:872,316...890,860 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 ISO (PMID:26489670) UniProtKB PMID:26489670 NCBI chrNW_004936481:13,919,006...13,973,868 JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 ISO (PMID:26489670)
(PMID:24448648)
UniProtKB
FlyBase
PMID:24448648, PMID:26489670 NCBI chrNW_004936487:11,341,663...11,393,275 JBrowse link
G Rnf111 ring finger protein 111 ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004936471:20,139,798...20,210,291 JBrowse link
G Rnf125 ring finger protein 125 ISO (PMID:27411375) UniProtKB PMID:27411375 NCBI chrNW_004936682:1,228,903...1,268,651 JBrowse link
G Rnf135 ring finger protein 135 ISO (PMID:31006531)
(MGI:6152590|PMID:21147464)
UniProt PMID:21147464, PMID:31006531 MGI:6152590 NCBI chrNW_004936538:2,741,308...2,757,042 JBrowse link
G Rnf165 ring finger protein 165 ISO (MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:5499270 NCBI chrNW_004936517:428,689...531,360 JBrowse link
G Rnf167 ring finger protein 167 ISO (PMID:16314844) UniProtKB PMID:16314844 NCBI chrNW_004936677:2,766,724...2,771,111 JBrowse link
G Rnf180 ring finger protein 180 ISO (MGI:5505713|PMID:23926250) MGI PMID:23926250 MGI:5505713 NCBI chrNW_004936480:4,809,103...4,834,977 JBrowse link
G Rnf183 ring finger protein 183 ISO (PMID:29507230)
(PMID:26567849)
UniProt
UniProtKB
PMID:26567849, PMID:29507230 NCBI chrNW_004936559:302,015...302,757 JBrowse link
G Rnf20 ring finger protein 20 ISO (PMID:19037095) UniProtKB PMID:19037095 NCBI chrNW_004936524:9,690,611...9,715,579 JBrowse link
G Rnf31 ring finger protein 31 ISO (PMID:12629548), (PMID:17006537) UniProtKB PMID:12629548, PMID:17006537 NCBI chrNW_004936722:385,972...397,718 JBrowse link
G Rnf41 ring finger protein 41 ISO (PMID:14765125), (PMID:18541373)
(MGI:3819273|PMID:18495327)
UniProtKB
MGI
PMID:14765125, PMID:18495327, PMID:18541373 MGI:3819273 NCBI chrNW_004936646:605,302...630,645 JBrowse link
G Rusc1 RUN and SH3 domain containing 1 ISO (PMID:19365808) UniProtKB PMID:19365808 NCBI chrNW_004936580:4,808,620...4,818,097 JBrowse link
G Sash1 SAM and SH3 domain containing 1 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936489:1,569,143...1,740,398 JBrowse link
G Shprh SNF2 histone linker PHD RING helicase ISO (PMID:17108083) FlyBase PMID:17108083 NCBI chrNW_004936625:533,870...617,936 JBrowse link
G Skp1 S-phase kinase associated protein 1 ISO (PMID:12820959) ParkinsonsUK-UCL PMID:12820959 NCBI chrNW_004936647:1,073,647...1,090,841 JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO (MGI:3768604|PMID:17785450) MGI PMID:17785450 MGI:3768604 NCBI chrNW_004936518:5,635,856...5,664,057 JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO (PMID:19937093) UniProtKB PMID:19937093 NCBI chrNW_004936750:1,381,864...1,406,736 JBrowse link
G Spop speckle type BTB/POZ protein ISO (PMID:14528312) UniProt PMID:14528312 NCBI chrNW_004936490:11,894,449...11,969,730 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:19713937)
(MGI:2149486|PMID:11435423)
(PMID:15781469), (PMID:16275660)
UniProtKB
MGI
HGNC
PMID:11435423, PMID:15781469, PMID:16275660, PMID:19713937 MGI:2149486 NCBI chrNW_004936501:328,767...330,963 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:20181722) ParkinsonsUK-UCL PMID:20181722 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004936477:21,665,955...21,670,667 JBrowse link
G Tnks tankyrase ISO (PMID:19759537), (PMID:21478859) UniProtKB PMID:19759537, PMID:21478859 NCBI chrNW_004936573:788,909...993,453 JBrowse link
G Tnks2 tankyrase 2 ISO (PMID:19759537), (PMID:21478859) UniProtKB PMID:19759537, PMID:21478859 NCBI chrNW_004936601:2,776,338...2,837,703 JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ISO (PMID:15247280) BHF-UCL PMID:15247280 NCBI chrNW_004936524:1,219,101...1,229,937 JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (PMID:15125833), (PMID:19675569) UniProtKB PMID:15125833, PMID:19675569 NCBI chrNW_004936533:1,857,685...1,874,973 JBrowse link
G Trim21 tripartite motif containing 21 ISO (PMID:16297862) UniProtKB PMID:16297862 NCBI chrNW_004936498:690,481...697,305 JBrowse link
G Trim32 tripartite motif containing 32 ISO (PMID:18632609)
(MGI:5320515|PMID:22299041)
BHF-UCL
MGI
PMID:18632609, PMID:22299041 MGI:5320515 NCBI chrNW_004936487:5,606,690...5,619,856 JBrowse link
G Trim6 tripartite motif containing 6 ISO (MGI:5492022|PMID:22328504) UniProt PMID:22328504 MGI:5492022 NCBI chrNW_004937097:23,695...31,673 JBrowse link
G Trip12 thyroid hormone receptor interactor 12 ISO (PMID:30982744) UniProt PMID:30982744 NCBI chrNW_004936525:6,539,234...6,690,457 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (PMID:18339854) UniProtKB PMID:18339854 NCBI chrNW_004936647:891,357...913,963 JBrowse link
G Ube2d1 ubiquitin conjugating enzyme E2 D1 ISO (PMID:15247280), (PMID:16275645)
(MGI:3807157|PMID:18511420)
UniProtKB
MGI
PMID:15247280, PMID:16275645, PMID:18511420 MGI:3807157 NCBI chrNW_004936614:4,621,702...4,655,200 JBrowse link
G Ube2d2 ubiquitin conjugating enzyme E2 D2 ISO (PMID:15247280) BHF-UCL PMID:15247280 NCBI chrNW_004936531:8,668,954...8,686,305 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO (PMID:14765125), (PMID:16522193) UniProtKB PMID:14765125, PMID:16522193 NCBI chrNW_004936520:555,878...588,052 JBrowse link
G Ube2e1 ubiquitin conjugating enzyme E2 E1 ISO (PMID:15247280), (PMID:16522193) BHF-UCL PMID:15247280, PMID:16522193 NCBI chrNW_004936473:15,487,341...15,557,516 JBrowse link
G Ube2l3 ubiquitin conjugating enzyme E2 L3 ISO (PMID:10888878), (PMID:14765125) UniProtKB PMID:10888878, PMID:14765125 NCBI chrNW_004936619:2,070,836...2,137,314 JBrowse link
G Ube3c ubiquitin protein ligase E3C ISO (PMID:11278995) UniProtKB PMID:11278995 NCBI chrNW_004936797:452,597...529,631 JBrowse link
G Ube3d ubiquitin protein ligase E3D ISO (PMID:15749827) UniProtKB PMID:15749827 NCBI chrNW_004936510:7,718,552...7,862,946 JBrowse link
G Ube4b ubiquitination factor E4B ISO (MGI:3610695|PMID:16314518)
(MGI:2149486|PMID:11435423), (MGI:5471850|PMID:23509263)
MGI PMID:11435423, PMID:16314518, PMID:23509263 MGI:2149486, MGI:3610695, MGI:5471850 NCBI chrNW_004936623:3,934,439...4,051,083 JBrowse link
G Ubox5 U-box domain containing 5 ISO (MGI:2149486|PMID:11435423) MGI PMID:11435423 MGI:2149486 NCBI chrNW_004936485:15,550,401...15,581,644 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ISO (PMID:21118991), (PMID:28689657) BHF-UCL PMID:21118991, PMID:28689657 NCBI chrNW_004936470:41,222,782...41,345,755 JBrowse link
G Zswim2 zinc finger SWIM-type containing 2 ISO (MGI:3692348|PMID:16522193) UniProt PMID:16522193 MGI:3692348 NCBI chrNW_004936506:10,634,364...10,650,484 JBrowse link
histone H2A K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf168 ring finger protein 168 ISO (PMID:20550933)
(PMID:19203578), (PMID:19203579), (PMID:19500350)
UniProtKB PMID:19203578, PMID:19203579, PMID:19500350, PMID:20550933 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf8 ring finger protein 8 ISO (PMID:22980979)
(PMID:20550933)
UniProtKB PMID:20550933, PMID:22980979 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
negative regulation of histone H2A K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO (PMID:20725033) UniProtKB PMID:20725033 NCBI chrNW_004936599:5,154,988...5,163,919 JBrowse link
G Trip12 thyroid hormone receptor interactor 12 ISO (PMID:22884692) UniProtKB PMID:22884692 NCBI chrNW_004936525:6,539,234...6,690,457 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ISO (PMID:22884692) UniProtKB PMID:22884692 NCBI chrNW_004936470:41,222,782...41,345,755 JBrowse link
negative regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppia peptidylprolyl isomerase A ISO (PMID:30328013) UniProt PMID:30328013 NCBI chrNW_004936478:19,669,727...19,673,355 JBrowse link
G Trim44 tripartite motif containing 44 ISO (PMID:23460740) BHF-UCL PMID:23460740 NCBI chrNW_004936533:2,440,241...2,548,831 JBrowse link
negative regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gps2 G protein pathway suppressor 2 ISO (MGI:5896692|PMID:28039360)
(MGI:6148392|PMID:24953653), (MGI:6148396|PMID:29499132), (MGI:6148454|PMID:22424771)
UniProt PMID:22424771, PMID:24953653, PMID:28039360, PMID:29499132 MGI:5896692, MGI:6148392, MGI:6148396, MGI:6148454 NCBI chrNW_004936595:608,730...611,871 JBrowse link
G Parp10 poly(ADP-ribose) polymerase family member 10 ISO (PMID:23575687) UniProtKB PMID:23575687 NCBI chrNW_004936470:8,179,416...8,194,041 JBrowse link
G Plaa phospholipase A2 activating protein ISO (MGI:5883825|PMID:28413018) UniProt PMID:28413018 MGI:5883825 NCBI chrNW_004936611:2,665,294...2,698,372 JBrowse link
negative regulation of protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dysf dysferlin ISO (MGI:5433472|PMID:20724702) MGI PMID:20724702 MGI:5433472 NCBI chrNW_004936491:15,412,606...15,618,519 JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chrNW_004936542:3,567,469...3,571,393 JBrowse link
positive regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc2 baculoviral IAP repeat containing 2 ISO (PMID:21931591) UniProtKB PMID:21931591 NCBI chrNW_004936551:5,515,904...5,535,864 JBrowse link
G Nmi N-myc and STAT interactor ISO (MGI:5546557|PMID:23956435) MGI PMID:23956435 MGI:5546557 NCBI chrNW_004936469:26,194,237...26,215,244 JBrowse link
positive regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc2 baculoviral IAP repeat containing 2 ISO (PMID:21931591) UniProtKB PMID:21931591 NCBI chrNW_004936551:5,515,904...5,535,864 JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked ISO (PMID:27980081) UniProt PMID:27980081 NCBI chrNW_004936502:7,770,896...7,820,555 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:25891078) UniProtKB PMID:25891078 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (PMID:23871208)
(MGI:5562517|PMID:23871208)
UniProtKB
UniProt
PMID:23871208 MGI:5562517 NCBI chrNW_004936690:2,180,804...2,232,869 JBrowse link
positive regulation of protein linear polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:23453807)
(MGI:5495588|PMID:23453807)
ParkinsonsUK-UCL PMID:23453807 MGI:5495588 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Xiap X-linked inhibitor of apoptosis ISO (PMID:21931591) UniProtKB PMID:21931591 NCBI chrNW_004936479:6,677,533...6,724,800 JBrowse link
positive regulation of protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc2 baculoviral IAP repeat containing 2 ISO (MGI:3819901|PMID:18621737) MGI PMID:18621737 MGI:3819901 NCBI chrNW_004936551:5,515,904...5,535,864 JBrowse link
G Birc3 baculoviral IAP repeat containing 3 ISO (MGI:3819901|PMID:18621737) MGI PMID:18621737 MGI:3819901 NCBI chrNW_004936551:5,544,047...5,556,550 JBrowse link
G Fbxo4 F-box protein 4 ISO (MGI:5299398|PMID:21911473) MGI PMID:21911473 MGI:5299398 NCBI chrNW_004936518:855,304...873,927 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (PMID:22682227) BHF-UCL PMID:22682227 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 ISO (PMID:29295817) UniProtKB PMID:29295817 NCBI chrNW_004936469:18,966,239...19,016,829 JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004936501:13,154,963...13,167,211 JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO (MGI:5468878|PMID:23277542) MGI PMID:23277542 MGI:5468878 NCBI chrNW_004936518:5,635,856...5,664,057 JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 ISO (PMID:28931592) UniProt PMID:28931592 NCBI chrNW_004936540:2,953,837...3,021,430 JBrowse link
G Ube2d1 ubiquitin conjugating enzyme E2 D1 ISO (MGI:3819901|PMID:18621737) MGI PMID:18621737 MGI:3819901 NCBI chrNW_004936614:4,621,702...4,655,200 JBrowse link
protein K11-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936783:509,287...591,153 JBrowse link
G Anapc10 anaphase promoting complex subunit 10 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936535:3,984,980...4,061,237 JBrowse link
G Anapc11 anaphase promoting complex subunit 11 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936594:5,402,290...5,407,510 JBrowse link
G Anapc13 anaphase promoting complex subunit 13 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936529:7,569,362...7,577,537 JBrowse link
G Anapc2 anaphase promoting complex subunit 2 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936669:797,475...808,952 JBrowse link
G Anapc4 anaphase promoting complex subunit 4 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936477:4,134,449...4,166,496 JBrowse link
G Anapc5 anaphase promoting complex subunit 5 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936558:2,967,684...3,006,833 JBrowse link
G Anapc7 anaphase promoting complex subunit 7 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936558:3,365,729...3,391,292 JBrowse link
G Cdc16 cell division cycle 16 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004937030:217,078...242,126 JBrowse link
G Cdc23 cell division cycle 23 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936531:7,371,818...7,392,999 JBrowse link
G Cdc26 cell division cycle 26 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936559:321,141...330,103 JBrowse link
G Cdc27 cell division cycle 27 ISO (PMID:18485873) UniProtKB PMID:18485873 NCBI chrNW_004936541:2,700,997...2,762,180 JBrowse link
G LOC101971161 ubiquitin-conjugating enzyme E2 E2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936473:14,988,802...15,280,650 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:25621951) UniProtKB PMID:25621951 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Rnf26 ring finger protein 26 ISO (PMID:25254379) UniProtKB PMID:25254379 NCBI chrNW_004936542:4,265,226...4,268,037 JBrowse link
G Rnf4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936479:10,330,666...10,340,268 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936647:891,357...913,963 JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C ISO (PMID:18485873), (PMID:19822757), (PMID:20061386) UniProtKB PMID:18485873, PMID:19822757, PMID:20061386 NCBI chrNW_004936514:7,204,332...7,208,340 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936520:555,878...588,052 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
G Ube2e3 ubiquitin conjugating enzyme E2 E3 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936509:9,782,955...9,866,542 JBrowse link
G Ube2h ubiquitin conjugating enzyme E2 H ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936579:5,253,842...5,359,834 JBrowse link
G Ube2l3 ubiquitin conjugating enzyme E2 L3 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936619:2,070,836...2,137,314 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:19822757), (PMID:20061386), (PMID:20622874), (PMID:21376237) UniProtKB PMID:19822757, PMID:20061386, PMID:20622874, PMID:21376237 NCBI chrNW_004936886:643,358...648,293 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936567:2,222,317...2,226,725 JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936648:2,517,951...2,575,805 JBrowse link
protein K27-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf6 ring finger protein 6 ISO (PMID:19345326) UniProtKB PMID:19345326 NCBI chrNW_004936948:57,806...67,875 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936886:643,358...648,293 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936567:2,222,317...2,226,725 JBrowse link
protein K29-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itch itchy E3 ubiquitin protein ligase ISO (PMID:17028573), (PMID:18628966) UniProtKB PMID:17028573, PMID:18628966 NCBI chrNW_004936561:6,140,236...6,265,734 JBrowse link
G Rnf186 ring finger protein 186 ISO (PMID:23896122) UniProtKB PMID:23896122 NCBI chrNW_004936474:5,947,077...5,947,772 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936886:643,358...648,293 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936567:2,222,317...2,226,725 JBrowse link
protein K33-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl20 kelch like family member 20 ISO (PMID:24768539) UniProtKB PMID:24768539 NCBI chrNW_004936481:14,074,169...14,111,634 JBrowse link
protein K48-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor ISO (PMID:12847084), (PMID:24424410) ParkinsonsUK-UCL PMID:12847084, PMID:24424410 NCBI chrNW_004936475:8,692,969...8,727,252 JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 ISO (PMID:16118314), (PMID:19340006) UniProtKB PMID:16118314, PMID:19340006 NCBI chrNW_004936529:648,661...713,616 JBrowse link
G Bfar bifunctional apoptosis regulator ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004936501:2,811,967...2,839,357 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chrNW_004936600:4,215,219...4,424,498 JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936588:160,066...167,259 JBrowse link
G Cul1 cullin 1 ISO (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chrNW_004936527:4,971,002...5,019,465 JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:26479788) UniProtKB PMID:26479788 NCBI chrNW_004936536:8,844,778...8,853,442 JBrowse link
G Fbxo38 F-box protein 38 ISO (PMID:30487606) UniProt PMID:30487606 NCBI chrNW_004936504:6,319,026...6,369,487 JBrowse link
G Hace1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 ISO (PMID:22036506) UniProtKB PMID:22036506 NCBI chrNW_004936564:1,499,918...1,582,719 JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO (PMID:19881509), (PMID:30328013)
(MGI:3774677|PMID:18246070)
UniProt
BHF-UCL
PMID:18246070, PMID:19881509, PMID:30328013 MGI:3774677 NCBI chrNW_004936561:6,140,236...6,265,734 JBrowse link
G Klhl3 kelch like family member 3 ISO (PMID:23576762) UniProtKB PMID:23576762 NCBI chrNW_004936597:4,592,654...4,696,348 JBrowse link
G LOC101971161 ubiquitin-conjugating enzyme E2 E2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936473:14,988,802...15,280,650 JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 ISO (PMID:15673284) UniProtKB PMID:15673284 NCBI chrNW_004936643:2,455,496...2,507,185 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase ISO (PMID:21463633) BHF-UCL PMID:21463633 NCBI chrNW_004936497:6,106,284...6,318,339 JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (PMID:29883609)
(MGI:5291872|PMID:21874024)
UniProtKB
MGI
PMID:21874024, PMID:29883609 MGI:5291872 NCBI chrNW_004936491:8,985,074...9,040,863 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:21376232), (PMID:23858059) ParkinsonsUK-UCL PMID:21376232, PMID:23858059 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Rbx1 ring-box 1 ISO (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chrNW_004936492:872,316...890,860 JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ISO (PMID:18450452), (PMID:22609986) UniProtKB PMID:18450452, PMID:22609986 NCBI chrNW_004936538:139,690...203,600 JBrowse link
G Rnf115 ring finger protein 115 ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chrNW_004936867:492,561...553,498 JBrowse link
G Rnf126 ring finger protein 126 ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chrNW_004936588:231,723...237,969 JBrowse link
G Rnf146 ring finger protein 146 ISO (PMID:21478859) UniProtKB PMID:21478859 NCBI chrNW_004936639:2,394,566...2,417,452 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:21203937) UniProtKB PMID:21203937 NCBI chrNW_004936497:3,357,464...3,421,813 JBrowse link
G Rnf187 ring finger protein 187 ISO (PMID:20852630) UniProtKB PMID:20852630 NCBI chrNW_004937135:64,950...70,083 JBrowse link
G Rnf216 ring finger protein 216 ISO (PMID:19893624) UniProtKB PMID:19893624 NCBI chrNW_004936765:452,755...592,358 JBrowse link
G Rnf34 ring finger protein 34 ISO (PMID:25012219) UniProtKB PMID:25012219 NCBI chrNW_004936558:2,901,386...2,918,976 JBrowse link
G Rnf4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Rnf5 ring finger protein 5 ISO (PMID:19285439) UniProtKB PMID:19285439 NCBI chrNW_004936727:1,422,207...1,424,808 JBrowse link
G Rnf6 ring finger protein 6 ISO (MGI:3603857|PMID:16204183) UniProt PMID:16204183 MGI:3603857 NCBI chrNW_004936948:57,806...67,875 JBrowse link
G Rnf8 ring finger protein 8 ISO (PMID:21911360), (PMID:22266820), (PMID:22373579) UniProtKB PMID:21911360, PMID:22266820, PMID:22373579 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Skp1 S-phase kinase associated protein 1 ISO (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chrNW_004936647:1,073,647...1,090,841 JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO (PMID:27194766) UniProt PMID:27194766 NCBI chrNW_004936518:5,635,856...5,664,057 JBrowse link
G Syvn1 synoviolin 1 ISO (PMID:14593114) ParkinsonsUK-UCL PMID:14593114 NCBI chrNW_004936599:4,235,779...4,243,395 JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (PMID:15258597) UniProtKB PMID:15258597 NCBI chrNW_004936560:5,124,955...5,138,988 JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ISO (PMID:15247280) BHF-UCL PMID:15247280 NCBI chrNW_004936524:1,219,101...1,229,937 JBrowse link
G Trim38 tripartite motif containing 38 ISO (MGI:5441682|PMID:22539786) MGI PMID:22539786 MGI:5441682 NCBI chrNW_004936671:1,841,722...1,853,804 JBrowse link
G Ttc3 tetratricopeptide repeat domain 3 ISO (PMID:20059950) UniProtKB PMID:20059950 NCBI chrNW_004936500:5,604,783...5,724,121 JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936479:10,330,666...10,340,268 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936647:891,357...913,963 JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936514:7,204,332...7,208,340 JBrowse link
G Ube2d1 ubiquitin conjugating enzyme E2 D1 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936614:4,621,702...4,655,200 JBrowse link
G Ube2d2 ubiquitin conjugating enzyme E2 D2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936531:8,668,954...8,686,305 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936520:555,878...588,052 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
G Ube2e1 ubiquitin conjugating enzyme E2 E1 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936473:15,487,341...15,557,516 JBrowse link
G Ube2e3 ubiquitin conjugating enzyme E2 E3 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936509:9,782,955...9,866,542 JBrowse link
G Ube2g1 ubiquitin conjugating enzyme E2 G1 ISO (PMID:14593114), (PMID:20061386)
(MGI:5634892|PMID:12847084)
ParkinsonsUK-UCL PMID:12847084, PMID:14593114, PMID:20061386 MGI:5634892 NCBI chrNW_004936615:4,813,101...4,816,554 JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936778:1,414,410...1,440,949 JBrowse link
G Ube2h ubiquitin conjugating enzyme E2 H ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936579:5,253,842...5,359,834 JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936482:7,244,972...7,323,263 JBrowse link
G Ube2q2 ubiquitin conjugating enzyme E2 Q2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936471:36,257,454...36,314,634 JBrowse link
G Ube2r2 ubiquitin conjugating enzyme E2 R2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936524:2,005,508...2,103,878 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936567:2,222,317...2,226,725 JBrowse link
G Ube3a ubiquitin protein ligase E3A ISO (PMID:12890688) UniProtKB PMID:12890688 NCBI chrNW_004936471:41,187,665...41,290,345 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ISO (PMID:28689657) FlyBase PMID:28689657 NCBI chrNW_004936470:41,222,782...41,345,755 JBrowse link
G Znrf1 zinc and ring finger 1 ISO (MGI:5306704|PMID:22057101) UniProt PMID:22057101 MGI:5306704 NCBI chrNW_004936475:23,814,200...23,918,871 JBrowse link
protein K6-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bard1 BRCA1 associated RING domain 1 ISO (PMID:12890688), (PMID:20351172) UniProtKB PMID:12890688, PMID:20351172 NCBI chrNW_004936586:2,200,211...2,272,781 JBrowse link
G Brca1 BRCA1 DNA repair associated ISO (PMID:12890688), (PMID:20351172) UniProtKB PMID:12890688, PMID:20351172 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:25621951) UniProtKB PMID:25621951 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Rnf4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Rnf6 ring finger protein 6 ISO (PMID:19345326) UniProtKB PMID:19345326 NCBI chrNW_004936948:57,806...67,875 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936886:643,358...648,293 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936567:2,222,317...2,226,725 JBrowse link
protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 ISO (PMID:19340006) UniProtKB PMID:19340006 NCBI chrNW_004936529:648,661...713,616 JBrowse link
G Bfar bifunctional apoptosis regulator ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004936501:2,811,967...2,839,357 JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO (MGI:5427282|PMID:22431752) MGI PMID:22431752 MGI:5427282 NCBI chrNW_004936494:5,761,801...5,853,673 JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO (PMID:18718448), (PMID:19592251) UniProtKB PMID:18718448, PMID:19592251 NCBI chrNW_004936561:6,140,236...6,265,734 JBrowse link
G LOC101971161 ubiquitin-conjugating enzyme E2 E2 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936473:14,988,802...15,280,650 JBrowse link
G Magel2 MAGE family member L2 ISO (PMID:23452853) UniProtKB PMID:23452853 NCBI chrNW_004936805:882,296...886,442 JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO PMID:20159449 UniProt PMID:20159449 RGD:8554407 NCBI chrNW_004936471:17,254,777...17,374,725 JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (PMID:29883609) UniProtKB PMID:29883609 NCBI chrNW_004936491:8,985,074...9,040,863 JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 ISO (MGI:5562512|PMID:23892723) MGI PMID:23892723 MGI:5562512 NCBI chrNW_004936599:3,099,256...3,110,566 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:15728840), (PMID:17314283), (PMID:19880420), (PMID:25621951) UniProtKB PMID:15728840, PMID:17314283, PMID:19880420, PMID:25621951 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO (PMID:20595234), (PMID:24332808) UniProtKB PMID:20595234, PMID:24332808 NCBI chrNW_004936581:2,031,894...2,042,294 JBrowse link
G Rnf115 ring finger protein 115 ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chrNW_004936867:492,561...553,498 JBrowse link
G Rnf126 ring finger protein 126 ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chrNW_004936588:231,723...237,969 JBrowse link
G Rnf135 ring finger protein 135 ISO (PMID:31006531) UniProt PMID:31006531 NCBI chrNW_004936538:2,741,308...2,757,042 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004936497:3,357,464...3,421,813 JBrowse link
G Rnf168 ring finger protein 168 ISO (PMID:22266820) UniProtKB PMID:22266820 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf186 ring finger protein 186 ISO (PMID:23896122) UniProtKB PMID:23896122 NCBI chrNW_004936474:5,947,077...5,947,772 JBrowse link
G Rnf4 ring finger protein 4 ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Rnf5 ring finger protein 5 ISO (PMID:19269966) UniProtKB PMID:19269966 NCBI chrNW_004936727:1,422,207...1,424,808 JBrowse link
G Rnf8 ring finger protein 8 ISO (PMID:21911360) UniProtKB PMID:21911360 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:16307917) UniProtKB PMID:16307917 NCBI chrNW_004936501:328,767...330,963 JBrowse link
G Traf2 TNF receptor associated factor 2 ISO (PMID:15258597), (PMID:20577214) UniProtKB PMID:15258597, PMID:20577214 NCBI chrNW_004936669:1,004,891...1,034,913 JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 ISO (PMID:19825828) UniProt PMID:19825828 NCBI chrNW_004936679:308,508...348,561 JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (PMID:19713527), (PMID:21068390)
(MGI:3610521|PMID:16252010)
(PMID:17135271), (PMID:19675569)
UniProtKB
UniProt
PMID:16252010, PMID:17135271, PMID:19675569, PMID:19713527, PMID:21068390 MGI:3610521 NCBI chrNW_004936533:1,857,685...1,874,973 JBrowse link
G Trim27 tripartite motif containing 27 ISO (PMID:23452853) UniProtKB PMID:23452853 NCBI chrNW_004936914:245,348...263,060 JBrowse link
G Trim56 tripartite motif containing 56 ISO (MGI:4849871|PMID:21074459) UniProt PMID:21074459 MGI:4849871 NCBI chrNW_004936543:1,007,253...1,016,374 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936647:891,357...913,963 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
G Ube2e3 ubiquitin conjugating enzyme E2 E3 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936509:9,782,955...9,866,542 JBrowse link
G Ube2g1 ubiquitin conjugating enzyme E2 G1 ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936615:4,813,101...4,816,554 JBrowse link
G Ube2o ubiquitin conjugating enzyme E2 O ISO (PMID:23452853) UniProtKB PMID:23452853 NCBI chrNW_004936594:1,490,257...1,554,610 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936886:643,358...648,293 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T ISO (PMID:20061386) UniProtKB PMID:20061386 NCBI chrNW_004936567:2,222,317...2,226,725 JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 ISO (PMID:16307917), (PMID:21512573), (PMID:31006531) UniProt PMID:16307917, PMID:21512573, PMID:31006531 NCBI chrNW_004936514:4,382,428...4,405,151 JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 ISO (MGI:4821930|PMID:19997087) UniProt PMID:19997087 MGI:4821930 NCBI chrNW_004936475:19,835,909...19,944,426 JBrowse link
G Zfp91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase ISO (PMID:20682767) UniProtKB PMID:20682767 NCBI chrNW_004936581:3,716,921...3,748,327 JBrowse link
protein linear polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 ISO (PMID:21455173), (PMID:21455180), (PMID:21455181), (PMID:23453807) UniProtKB PMID:21455173, PMID:21455180, PMID:21455181, PMID:23453807 NCBI chrNW_004936485:18,057,569...18,071,787 JBrowse link
G Rnf31 ring finger protein 31 ISO (PMID:21455173), (PMID:21455180), (PMID:21455181), (PMID:23453807) UniProtKB PMID:21455173, PMID:21455180, PMID:21455181, PMID:23453807 NCBI chrNW_004936722:385,972...397,718 JBrowse link
G Sharpin SHANK associated RH domain interactor ISO (PMID:21455173), (PMID:21455180), (PMID:21455181) UniProtKB PMID:21455173, PMID:21455180, PMID:21455181 NCBI chrNW_004936470:8,076,605...8,081,872 JBrowse link
regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sash1 SAM and SH3 domain containing 1 ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004936489:1,569,143...1,740,398 JBrowse link
regulation of protein polyubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf2 forkhead box F2 ISO (PMID:29374064) UniProt PMID:29374064 NCBI chrNW_004936633:2,538,209...2,543,649 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12003
    metabolic process 7586
      cellular metabolic process 6968
        cellular macromolecule metabolic process 5391
          cellular protein metabolic process 3356
            cellular protein modification process 2694
              protein modification by small protein conjugation or removal 653
                protein modification by small protein conjugation 559
                  protein ubiquitination 506
                    protein polyubiquitination 180
                      negative regulation of protein polyubiquitination + 10
                      positive regulation of protein polyubiquitination + 15
                      protein K11-linked ubiquitination 27
                      protein K27-linked ubiquitination 4
                      protein K29-linked ubiquitination 5
                      protein K33-linked ubiquitination 1
                      protein K48-linked ubiquitination + 59
                      protein K6-linked ubiquitination 8
                      protein K63-linked ubiquitination + 47
                      protein linear polyubiquitination + 5
                      protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process 0
                      regulation of protein polyubiquitination + 27
Path 2
Term Annotations click to browse term
  biological_process 12003
    metabolic process 7586
      organic substance metabolic process 7279
        macromolecule metabolic process 6277
          protein metabolic process 3715
            protein modification process 2694
              cellular protein modification process 2694
                protein modification by small protein conjugation or removal 653
                  protein modification by small protein conjugation 559
                    protein ubiquitination 506
                      protein polyubiquitination 180
                        negative regulation of protein polyubiquitination + 10
                        positive regulation of protein polyubiquitination + 15
                        protein K11-linked ubiquitination 27
                        protein K27-linked ubiquitination 4
                        protein K29-linked ubiquitination 5
                        protein K33-linked ubiquitination 1
                        protein K48-linked ubiquitination + 59
                        protein K6-linked ubiquitination 8
                        protein K63-linked ubiquitination + 47
                        protein linear polyubiquitination + 5
                        protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process 0
                        regulation of protein polyubiquitination + 27
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.