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ONTOLOGY REPORT - ANNOTATIONS


Term:tRNA-type intron splice site recognition and cleavage
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Accession:GO:0000379 term browser browse the term
Definition:RNA processing that begins when the tertiary structure of a tRNA type intron is recognized, and ends when the endonucleolytic cleavage of the RNA at both the 5' and 3' splice sites occurs.


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tRNA-type intron splice site recognition and cleavage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tsen2 tRNA splicing endonuclease subunit 2 JBrowse link 4 147,455,506 147,490,869 RGD:13792537
G Tsen34 tRNA splicing endonuclease subunit 34 JBrowse link 1 64,023,924 64,031,756 RGD:13792537
G Tsen34l1 tRNA splicing endonuclease subunit 34-like 1 JBrowse link 1 64,092,224 64,100,061 RGD:13792537
G Tsen54 tRNA splicing endonuclease subunit 54 JBrowse link 10 104,358,401 104,366,926 RGD:13792537

Term paths to the root
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  biological_process 19676
    metabolic process 11952
      organic substance metabolic process 11358
        macromolecule metabolic process 9814
          gene expression 6045
            RNA processing 905
              tRNA-type intron splice site recognition and cleavage 4
Path 2
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      cellular metabolic process 10780
        cellular aromatic compound metabolic process 5534
          nucleobase-containing compound metabolic process 5310
            nucleic acid metabolic process 4821
              RNA metabolic process 4321
                RNA processing 905
                  RNA splicing 389
                    RNA splicing, via endonucleolytic cleavage and ligation 12
                      tRNA splicing, via endonucleolytic cleavage and ligation 11
                        tRNA-type intron splice site recognition and cleavage 4
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.