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ONTOLOGY REPORT - ANNOTATIONS


Term:carbon catabolite activation of transcription from RNA polymerase II promoter
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Accession:GO:0000436 term browser browse the term
Definition:Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
Synonyms:exact_synonym: positive regulation of transcription from RNA polymerase II promoter by carbon catabolites


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positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 ISO (PMID:10207113)
(MGI:MGI:5297786|PMID:16723356)
RGD PMID:10207113, PMID:16723356 MGI:MGI:5297786 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO (MGI:MGI:5142372|PMID:11875061) RGD PMID:11875061 MGI:MGI:5142372 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Usf1 upstream transcription factor 1 ISO (PMID:7852331)
(MGI:MGI:1330677|PMID:9890958)
RGD PMID:7852331, PMID:9890958 MGI:MGI:1330677 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting ISO
IEA
(PMID:7852331)
(MGI:MGI:1330677|PMID:9890958)
GO_REF:0000107
RGD
Ensembl
PMID:7852331, PMID:9890958 GO_REF:0000107, MGI:MGI:1330677 NCBI chr 1:89,371,798...89,383,005
Ensembl chr 1:89,371,794...89,382,463
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    response to stimulus 10583
      response to chemical 6343
        response to nutrient 311
          cellular response to nutrient 63
            carbon catabolite regulation of transcription 5
              carbon catabolite regulation of transcription from RNA polymerase II promoter 4
                carbon catabolite activation of transcription from RNA polymerase II promoter 4
                  positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source 0
                  positive regulation of transcription from RNA polymerase II promoter by galactose 1
                  positive regulation of transcription from RNA polymerase II promoter by glucose 3
                  positive regulation of transcription from RNA polymerase II promoter by oleic acid 0
Path 2
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      cellular metabolic process 11085
        cellular aromatic compound metabolic process 5715
          nucleobase-containing compound metabolic process 5489
            nucleic acid metabolic process 4985
              RNA metabolic process 4469
                RNA biosynthetic process 3477
                  regulation of RNA biosynthetic process 3341
                    regulation of nucleic acid-templated transcription 3336
                      positive regulation of nucleic acid-templated transcription 1754
                        positive regulation of transcription, DNA-templated 1696
                          carbon catabolite activation of transcription 5
                            carbon catabolite activation of transcription from RNA polymerase II promoter 4
                              positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source 0
                              positive regulation of transcription from RNA polymerase II promoter by galactose 1
                              positive regulation of transcription from RNA polymerase II promoter by glucose 3
                              positive regulation of transcription from RNA polymerase II promoter by oleic acid 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.