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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA 5'-end processing
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Accession:GO:0000966 term browser browse the term
Definition:Any process involved in forming the mature 5' end of an RNA molecule.


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RNA 5'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Piwil2 piwi-like RNA-mediated gene silencing 2 JBrowse link 15 52,037,693 52,116,277 RGD:1624291
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abt1 activator of basal transcription 1 JBrowse link 17 43,946,118 43,948,224 RGD:13792537
G Tbl3 transducin (beta)-like 3 JBrowse link 10 14,066,984 14,072,197 RGD:13792537
mitochondrial RNA 5'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 14 113,530,470 113,561,645 RGD:1624291
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 11 47,047,342 47,052,420 RGD:1624291
RGD:1600115
mitochondrial tRNA 5'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 JBrowse link X 21,696,796 21,699,241 RGD:1600115
RGD:1624291
G Prorp protein only RNase P catalytic subunit JBrowse link 6 76,079,880 76,171,298 RGD:1624291
RGD:1600115
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 11 47,047,342 47,052,420 RGD:1624291
RGD:1600115
tRNA 5'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Thg1l tRNA-histidine guanylyltransferase 1-like JBrowse link 10 31,043,647 31,052,092 RGD:1600115
tRNA 5'-leader removal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pop1 POP1 homolog, ribonuclease P/MRP subunit JBrowse link 7 73,270,403 73,298,209 RGD:1624291
G Pop4 POP4 homolog, ribonuclease P/MRP subunit JBrowse link 1 94,661,127 94,669,461 RGD:1624291
RGD:1600115
G Pop5 POP5 homolog, ribonuclease P/MRP subunit JBrowse link 12 47,138,346 47,143,152 RGD:1624291
G Pop7 POP7 homolog, ribonuclease P/MRP subunit JBrowse link 12 22,259,713 22,260,754 RGD:1624291
G Prorp protein only RNase P catalytic subunit JBrowse link 6 76,079,880 76,171,298 RGD:13792537
G Rpp14 ribonuclease P/MRP subunit p14 JBrowse link 15 18,625,963 18,636,157 RGD:1624291
G Rpp21 ribonuclease P/MRP subunit p21 JBrowse link 20 2,515,541 2,517,471 RGD:1624291
G Rpp25 ribonuclease P and MRP subunit p25 JBrowse link 8 62,283,336 62,284,716 RGD:1624291
RGD:13792537
RGD:1600115
G Rpp25l ribonuclease P/MRP subunit p25 like JBrowse link 5 58,096,037 58,097,577 RGD:13792537
G Rpp30 ribonuclease P/MRP subunit p30 JBrowse link 1 254,697,247 254,720,093 RGD:1624291
G Rpp38 ribonuclease P/MRP subunit p38 JBrowse link 17 78,915,450 78,919,144 RGD:1624291
RGD:13792537
G Rpp40 ribonuclease P/MRP subunit p40 JBrowse link 17 29,638,647 29,647,709 RGD:1624291
RGD:13792537
RGD:1600115
G Ssb small RNA binding exonuclease protection factor La JBrowse link 3 56,092,425 56,102,008 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11954
      organic substance metabolic process 11359
        macromolecule metabolic process 9815
          gene expression 6046
            RNA processing 906
              RNA 5'-end processing 20
                mitochondrial RNA 5'-end processing + 4
                ncRNA 5'-end processing + 18
Path 2
Term Annotations click to browse term
  biological_process 19678
    cellular process 18452
      cellular metabolic process 10782
        cellular nitrogen compound metabolic process 6418
          nucleobase-containing compound metabolic process 5311
            nucleic acid metabolic process 4822
              RNA metabolic process 4322
                RNA processing 906
                  RNA 5'-end processing 20
                    mitochondrial RNA 5'-end processing + 4
                    ncRNA 5'-end processing + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.