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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA polymerase II cis-regulatory region sequence-specific DNA binding
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Accession:GO:0000978 term browser browse the term
Definition:Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.
Comment:Note that the phrase "upstream activating sequence", or UAS is often used in S. cerevisiae literature to refer to cis-regulatory sequences. In bacteria such as E. coli, the phrase "upstream activating sequence", or UAS is usually a synonym for "enhancer".
Synonyms:related_synonym: RNA polymerase II core promoter proximal region sequence-specific DNA binding;   RNA polymerase II distal enhancer sequence-specific DNA binding;   RNA polymerase II promoter proximal region sequence-specific DNA binding;   RNA polymerase II proximal promoter sequence-specific DNA binding;   RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding
 alt_id: GO:0000980


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RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07025825.1 RGD:13792537
G AABR07067882.1 RGD:1600115
G Aebp2 AE binding protein 2 JBrowse link 4 174,799,378 174,863,260 RGD:1624291
G Ago1 argonaute RISC component 1 JBrowse link 5 144,444,390 144,479,430 RGD:1624291
G Akna AT-hook transcription factor JBrowse link 5 79,184,087 79,232,370 RGD:1624291
G Aknad1 AKNA domain containing 1 JBrowse link 2 211,541,800 211,585,332 RGD:1600115
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
RGD:1600115
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:1624291
RGD:1600115
G Arid3b AT-rich interaction domain 3B JBrowse link 8 62,569,601 62,616,837 RGD:1624291
G Arid3c AT-rich interaction domain 3C JBrowse link 5 58,107,182 58,114,632 RGD:1624291
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link 2 196,594,178 196,651,486 RGD:1600115
RGD:1624291
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 JBrowse link 1 146,399,217 146,556,437 RGD:1624291
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 JBrowse link 4 181,103,774 181,158,415 RGD:1624291
G Arx aristaless related homeobox JBrowse link X 62,363,757 62,376,139 RGD:1600115
RGD:1624291
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link 1 216,154,002 216,156,409 RGD:1624291
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:1624291
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:1624291
RGD:13792537
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:1600115
RGD:1624291
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:1624291
G Atf6b activating transcription factor 6 beta JBrowse link 20 4,414,283 4,422,283 RGD:1624291
G Atf7 activating transcription factor 7 JBrowse link 7 144,131,382 144,223,463 RGD:1624291
G Atoh1 atonal bHLH transcription factor 1 JBrowse link 4 95,498,003 95,500,098 RGD:1624291
G Bach1 BTB domain and CNC homolog 1 JBrowse link 11 27,364,913 27,398,713 RGD:1600115
RGD:1624291
G Bach2 BTB domain and CNC homolog 2 JBrowse link 5 47,458,891 47,807,176 RGD:13792537
RGD:1624291
G Batf basic leucine zipper ATF-like transcription factor JBrowse link 6 109,562,415 109,584,541 RGD:1624291
RGD:13792537
G Batf2 basic leucine zipper ATF-like transcription factor 2 JBrowse link 1 221,538,006 221,546,650 RGD:13792537
G Batf3 basic leucine zipper ATF-like transcription factor 3 JBrowse link 13 109,713,376 109,726,438 RGD:1624291
RGD:13792537
RGD:1600115
G Bcl11a BAF chromatin remodeling complex subunit BCL11A JBrowse link 14 108,826,717 108,921,197 RGD:1624291
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link 6 131,834,097 131,927,251 RGD:1624291
G Bcl3 BCL3, transcription coactivator JBrowse link 1 80,730,758 80,745,273 RGD:1624291
G Bcl6 BCL6, transcription repressor JBrowse link 11 80,255,790 80,279,075 RGD:1624291
RGD:1600115
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 4 140,703,619 140,709,319 RGD:1624291
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 17 85,360,439 85,370,283 RGD:1624291
G Bsx brain specific homeobox JBrowse link 8 45,061,670 45,065,430 RGD:1624291
RGD:13792537
G Calcoco1 calcium binding and coiled coil domain 1 JBrowse link 7 144,307,562 144,322,253 RGD:1600115
RGD:1624291
G Carf calcium responsive transcription factor JBrowse link 9 66,878,526 66,928,658 RGD:1624291
RGD:1600115
G Cc2d1a coiled-coil and C2 domain containing 1A JBrowse link 19 25,246,912 25,261,965 RGD:1624291
G Cc2d1b coiled-coil and C2 domain containing 1B JBrowse link 5 128,215,711 128,229,762 RGD:1624291
G Ccar1 cell division cycle and apoptosis regulator 1 JBrowse link 20 32,373,443 32,416,044 RGD:1600115
RGD:1624291
G Cdk9 cyclin-dependent kinase 9 JBrowse link 3 11,742,269 11,747,117 RGD:1624291
G Cdx1 caudal type homeo box 1 JBrowse link 18 56,337,485 56,355,477 RGD:1624291
RGD:1600115
G Cdx2 caudal type homeo box 2 JBrowse link 12 9,464,026 9,470,565 RGD:1624291
RGD:1600115
G Cdx4 caudal type homeo box 4 JBrowse link X 74,165,172 74,173,758 RGD:1624291
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:8661634
RGD:1600115
RGD:1624291
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:8661634
RGD:1624291
G Cebpd CCAAT/enhancer binding protein delta JBrowse link 11 89,008,008 89,009,146 RGD:8661634
RGD:1624291
G Cebpe CCAAT/enhancer binding protein epsilon JBrowse link 15 33,356,119 33,357,517 RGD:1624291
G Cebpg CCAAT/enhancer binding protein gamma JBrowse link 1 91,286,956 91,297,459 RGD:1624291
G Cebpz CCAAT/enhancer binding protein zeta JBrowse link 6 1,516,804 1,534,488 RGD:1624291
G Chd2 chromodomain helicase DNA binding protein 2 JBrowse link 1 134,757,934 134,873,053 RGD:1624291
G Chd7 chromodomain helicase DNA binding protein 7 JBrowse link 5 21,769,087 21,952,036 RGD:1624291
G Ciart circadian associated repressor of transcription JBrowse link 2 197,987,705 197,991,198 RGD:13792537
RGD:1624291
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1624291
RGD:1600115
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:1624291
G Creb3 cAMP responsive element binding protein 3 JBrowse link 5 59,063,532 59,068,196 RGD:1624291
G Creb3l2 cAMP responsive element binding protein 3-like 2 JBrowse link 4 64,869,285 64,981,519 RGD:1624291
G Crem cAMP responsive element modulator JBrowse link 17 57,021,704 57,090,888 RGD:1624291
G Crx cone-rod homeobox JBrowse link 1 77,744,593 77,758,913 RGD:1624291
G Ctcf CCCTC-binding factor JBrowse link 19 37,600,151 37,649,674 RGD:1624291
RGD:1600115
G Ctcfl CCCTC-binding factor like JBrowse link 3 171,145,203 171,168,375 RGD:1624291
G Cux1 cut-like homeobox 1 JBrowse link 12 23,150,886 23,470,095 RGD:1624291
G Cux2 cut-like homeobox 2 JBrowse link 12 40,016,774 40,221,067 RGD:1624291
G Cys1 cystin 1 JBrowse link 6 43,844,937 43,862,131 RGD:1624291
G Dach1 dachshund family transcription factor 1 JBrowse link 15 82,095,003 82,482,272 RGD:1624291
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:1624291
RGD:13792537
RGD:1600115
G Ddn dendrin JBrowse link 7 140,479,707 140,486,093 RGD:8554331
RGD:13792537
G Dhx36 DEAH-box helicase 36 JBrowse link 2 152,785,844 152,824,549 RGD:1600115
RGD:1624291
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:13792537
G Dlx3 distal-less homeobox 3 JBrowse link 10 82,937,971 82,943,367 RGD:13792537
G Dlx4 distal-less homeobox 4 JBrowse link 10 82,958,525 82,963,919 RGD:1624291
RGD:13792537
G Dlx5 distal-less homeobox 5 JBrowse link 4 32,387,741 32,392,085 RGD:1624291
RGD:13792537
RGD:1600115
G Dmtf1 cyclin D binding myb-like transcription factor 1 JBrowse link 4 21,862,297 21,902,798 RGD:1624291
RGD:13792537
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:1624291
G Drap1 Dr1 associated protein 1 JBrowse link 1 220,803,783 220,806,480 RGD:13792537
G Dux4 double homeobox 4 JBrowse link 16 3,754,968 3,766,532 RGD:1624291
G E2f4 E2F transcription factor 4 JBrowse link 19 37,252,828 37,260,239 RGD:1624291
G E2f7 E2F transcription factor 7 JBrowse link 7 53,275,659 53,318,261 RGD:1600115
RGD:1624291
G E2f8 E2F transcription factor 8 JBrowse link 1 104,185,436 104,203,683 RGD:1624291
RGD:1600115
G Ebf1 EBF transcription factor 1 JBrowse link 10 23,654,849 24,051,627 RGD:1624291
G Ebf2 EBF transcription factor 2 JBrowse link 15 43,905,099 44,103,742 RGD:1624291
G Ebf3 EBF transcription factor 3 JBrowse link 1 209,523,153 209,641,143 RGD:1624291
G Eed embryonic ectoderm development JBrowse link 1 154,189,252 154,216,340 RGD:1624291
G Egr2 early growth response 2 JBrowse link 20 22,452,170 22,461,018 RGD:1624291
G Ehf ets homologous factor JBrowse link 3 93,176,257 93,216,484 RGD:1624291
G Elf1 E74 like ETS transcription factor 1 JBrowse link 15 61,772,544 61,868,442 RGD:1624291
G Elf3 E74 like ETS transcription factor 3 JBrowse link 13 52,083,873 52,088,798 RGD:1624291
G Elf4 E74 like ETS transcription factor 4 JBrowse link X 135,239,626 135,284,330 RGD:1624291
G Elk1 ETS transcription factor ELK1 JBrowse link X 1,287,875 1,304,822 RGD:628487
RGD:1624291
G Elk3 ETS transcription factor ELK3 JBrowse link 7 34,086,213 34,149,601 RGD:1624291
G Elk4 ETS transcription factor ELK4 JBrowse link 13 48,788,262 48,813,267 RGD:1624291
G Emx1 empty spiracles homeobox 1 JBrowse link 4 116,967,646 116,984,136 RGD:13792537
G Emx2 empty spiracles homeobox 2 JBrowse link 1 280,633,938 280,640,946 RGD:13792537
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:1624291
RGD:1600115
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1581923
RGD:1624291
RGD:5128544
G Epas1 endothelial PAS domain protein 1 JBrowse link 6 10,306,508 10,385,239 RGD:1600115
RGD:1624291
G Erg ETS transcription factor ERG JBrowse link 11 35,645,317 35,749,637 RGD:1624291
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:1624291
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:8661629
RGD:1624291
G Esrra estrogen related receptor, alpha JBrowse link 1 222,168,729 222,178,842 RGD:1624291
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:1600115
RGD:1624291
G Ets1 ETS proto-oncogene 1, transcription factor JBrowse link 8 33,756,634 33,879,625 RGD:1624291
G Ets2 ETS proto-oncogene 2, transcription factor JBrowse link 11 36,075,709 36,092,495 RGD:1624291
G Etv1 ETS variant transcription factor 1 JBrowse link 6 58,467,215 58,558,640 RGD:1624291
G Etv2 ETS variant transcription factor 2 JBrowse link 1 89,091,239 89,094,570 RGD:1624291
G Etv4 ETS variant transcription factor 4 JBrowse link 10 89,685,058 89,700,300 RGD:1624291
G Etv6 ETS variant transcription factor 6 JBrowse link 4 167,754,684 167,992,370 RGD:1624291
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:1624291
G Fev FEV transcription factor, ETS family member JBrowse link 9 82,142,981 82,146,855 RGD:633697
G Fezf1 Fez family zinc finger 1 JBrowse link 4 50,309,281 50,312,608 RGD:1624291
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
G Figla folliculogenesis specific bHLH transcription factor JBrowse link 4 117,679,256 117,683,618 RGD:1624291
G Fli1 Fli-1 proto-oncogene, ETS transcription factor JBrowse link 8 33,541,932 33,661,111 RGD:1624291
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:1624291
RGD:13792537
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 80,214,691 80,221,417 RGD:1624291
RGD:13792537
G Fosl1 FOS like 1, AP-1 transcription factor subunit JBrowse link 1 220,826,560 220,835,066 RGD:629541
RGD:13792537
RGD:1624291
G Fosl2 FOS like 2, AP-1 transcription factor subunit JBrowse link 6 25,598,936 25,616,995 RGD:13792537
G Foxa1 forkhead box A1 JBrowse link 6 78,516,579 78,549,669 RGD:1624291
RGD:1600115
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
RGD:1600115
RGD:8553707
G Foxc2 forkhead box C2 JBrowse link 19 53,044,379 53,047,081 RGD:1624291
G Foxd1 forkhead box D1 JBrowse link 2 28,460,068 28,462,488 RGD:1624291
RGD:1600115
G Foxf1 forkhead box F1 JBrowse link 19 53,012,306 53,016,100 RGD:1600115
RGD:1624291
G Foxi1 forkhead box I1 JBrowse link 10 19,160,566 19,164,505 RGD:1624291
G Foxj1 forkhead box J1 JBrowse link 10 105,282,090 105,289,396 RGD:1624291
G Foxj2 forkhead box J2 JBrowse link 4 155,653,446 155,679,815 RGD:1624291
RGD:13792537
G Foxj3 forkhead box J3 JBrowse link 5 138,587,968 138,676,948 RGD:13792537
G Foxk2 forkhead box K2 JBrowse link 10 110,468,905 110,518,854 RGD:1624291
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:1624291
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:1624291
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:1624291
G Foxp2 forkhead box P2 JBrowse link 4 41,364,441 41,944,685 RGD:1624291
G Foxp3 forkhead box P3 JBrowse link X 15,753,175 15,768,648 RGD:1624291
G Foxp4 forkhead box P4 JBrowse link 9 15,068,378 15,124,962 RGD:1624291
G Foxq1 forkhead box Q1 JBrowse link 17 34,224,308 34,226,941 RGD:1624291
G Foxs1 forkhead box S1 JBrowse link 3 148,406,509 148,407,778 RGD:1624291
G Fubp1 far upstream element binding protein 1 JBrowse link 2 257,425,676 257,452,745 RGD:1624291
G Fubp3 far upstream element binding protein 3 JBrowse link 3 10,220,712 10,269,757 RGD:1624291
G Gabpa GA binding protein transcription factor subunit alpha JBrowse link 11 24,293,845 24,322,822 RGD:1624291
G Gata1 GATA binding protein 1 JBrowse link X 15,273,937 15,281,759 RGD:1624291
RGD:13792537
RGD:1600115
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
RGD:13792537
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1624291
RGD:13792537
G Gata4 GATA binding protein 4 JBrowse link 15 46,386,703 46,458,679 RGD:13792537
RGD:1624291
G Gata5 GATA binding protein 5 JBrowse link 3 175,701,278 175,709,465 RGD:13792537
RGD:1624291
G Gata6 GATA binding protein 6 JBrowse link 18 2,415,821 2,447,087 RGD:1600115
RGD:1624291
RGD:13792537
G Gcfc2 GC-rich sequence DNA-binding factor 2 JBrowse link 4 112,662,556 112,700,505 RGD:1624291
RGD:13792537
G Gcm1 glial cells missing transcription factor 1 JBrowse link 8 85,355,766 85,369,002 RGD:1624291
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:1624291
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
G Glis3 GLIS family zinc finger 3 JBrowse link 1 246,380,816 246,564,385 RGD:1624291
G Gmeb1 glucocorticoid modulatory element binding protein 1 JBrowse link 5 150,408,075 150,449,252 RGD:1624291
RGD:13792537
G Gmeb2 glucocorticoid modulatory element binding protein 2 JBrowse link 3 176,756,006 176,791,960 RGD:13792537
G Grhl1 grainyhead-like transcription factor 1 JBrowse link 6 43,734,837 43,795,757 RGD:1624291
G Grhl3 grainyhead-like transcription factor 3 JBrowse link 5 153,893,039 153,925,045 RGD:1624291
RGD:1600115
G Gsc goosecoid homeobox JBrowse link 6 128,147,181 128,149,220 RGD:1624291
G Gsx1 GS homeobox 1 JBrowse link 12 9,605,873 9,607,168 RGD:1624291
RGD:13792537
G Gzf1 GDNF-inducible zinc finger protein 1 JBrowse link 3 143,003,706 143,015,906 RGD:1624291
G H2az1 H2A.Z variant histone 1 JBrowse link 2 243,105,224 243,107,333 RGD:1624291
G H3f3a H3 histone family member 3A JBrowse link 13 99,091,246 99,102,828 RGD:1624291
G H3f3b H3 histone family member 3B JBrowse link 10 104,573,666 104,575,890 RGD:1624291
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link 10 43,250,729 43,253,296 RGD:1624291
G Hbp1 HMG-box transcription factor 1 JBrowse link 6 51,231,479 51,257,699 RGD:12911006
RGD:13792537
G Hcfc1 host cell factor C1 JBrowse link X 156,812,012 156,837,227 RGD:1600115
RGD:1624291
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:1624291
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:1624291
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:1624291
G Hdac5 histone deacetylase 5 JBrowse link 10 90,140,183 90,169,853 RGD:1624291
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Hdgf heparin binding growth factor JBrowse link 2 187,274,898 187,284,670 RGD:8554761
G Helt helt bHLH transcription factor JBrowse link 16 49,185,560 49,187,293 RGD:1624291
G Hes2 hes family bHLH transcription factor 2 JBrowse link 5 169,338,097 169,339,142 RGD:61626
G Hes3 hes family bHLH transcription factor 3 JBrowse link 5 169,463,196 169,469,795 RGD:1624291
G Hesx1 HESX homeobox 1 JBrowse link 16 2,616,538 2,636,708 RGD:1624291
G Heyl hes-related family bHLH transcription factor with YRPW motif-like JBrowse link 5 140,923,914 140,940,905 RGD:1624291
G Hhex hematopoietically expressed homeobox JBrowse link 1 256,101,994 256,107,581 RGD:1624291
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
G Hinfp histone H4 transcription factor JBrowse link 8 48,626,398 48,638,012 RGD:1624291
G Hivep1 HIVEP zinc finger 1 JBrowse link 17 22,278,103 22,403,362 RGD:1624291
G Hivep2 human immunodeficiency virus type I enhancer binding protein 2 JBrowse link 1 8,129,354 8,333,890 RGD:12790649
G Hltf helicase-like transcription factor JBrowse link 2 104,854,571 104,914,338 RGD:1624291
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1600115
RGD:1624291
G Hnf1a HNF1 homeobox A JBrowse link 12 47,407,811 47,433,342 RGD:1624291
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1624291
RGD:1600115
G Hnf4g hepatocyte nuclear factor 4, gamma JBrowse link 2 100,225,880 100,372,710 RGD:1624291
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:1624291
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1624291
RGD:13792537
G Hoxa10 homeobox A10 JBrowse link 4 82,285,940 82,295,892 RGD:1624291
G Hoxa13 homeo box A13 RGD:1624291
G Hoxa2 homeobox A2 JBrowse link 4 82,130,441 82,134,846 RGD:1624291
RGD:13792537
G Hoxa3 homeobox A3 JBrowse link 4 82,137,802 82,181,836 RGD:13792537
G Hoxa5 homeo box A5 RGD:1624291
RGD:13792537
G Hoxa6 homeobox A6 JBrowse link 4 82,173,478 82,183,597 RGD:13792537
G Hoxa7 homeobox A7 JBrowse link 4 82,184,299 82,187,890 RGD:1624291
RGD:13792537
G Hoxa9 homeobox A9 RGD:1624291
RGD:13792537
G Hoxb1 homeo box B1 JBrowse link 10 84,214,358 84,215,812 RGD:1624291
G Hoxb2 homeobox B2 JBrowse link 10 84,200,859 84,203,065 RGD:13792537
G Hoxb3 homeo box B3 JBrowse link 10 84,170,629 84,196,823 RGD:1624291
RGD:13792537
G Hoxb5 homeo box B5 JBrowse link 10 84,152,152 84,154,360 RGD:13792537
RGD:1624291
G Hoxb6 homeo box B6 JBrowse link 10 84,147,331 84,150,238 RGD:13792537
G Hoxb7 homeo box B7 JBrowse link 10 84,135,224 84,138,642 RGD:1624291
RGD:13792537
G Hoxb9 homeo box B9 JBrowse link 10 84,119,772 84,124,963 RGD:13792537
G Hoxc11 homeobox C11 JBrowse link 7 144,565,392 144,568,580 RGD:1624291
G Hoxc4 homeo box C4 JBrowse link 7 144,646,605 144,652,589 RGD:1600115
RGD:1624291
G Hoxc5 homeo box C5 JBrowse link 7 144,628,120 144,631,542 RGD:13792537
G Hoxc6 homeo box C6 JBrowse link 7 144,612,230 144,626,036 RGD:13792537
G Hoxd13 homeo box D13 JBrowse link 3 61,590,376 61,593,692 RGD:1624291
G Hoxd3 homeo box D3 JBrowse link 3 61,650,569 61,670,285 RGD:13792537
G Hoxd9 homeo box D9 JBrowse link 3 61,620,192 61,622,360 RGD:13792537
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:1624291
RGD:13792537
G Hsf2 heat shock transcription factor 2 JBrowse link 20 38,935,820 38,963,444 RGD:1624291
RGD:13792537
G Hsf4 heat shock transcription factor 4 JBrowse link 19 37,225,800 37,232,048 RGD:13792537
G Hsf5 heat shock transcription factor 5 JBrowse link 10 74,909,621 74,954,128 RGD:13792537
G Hsfy2 heat shock transcription factor, Y linked 2 JBrowse link 9 63,289,937 63,291,350 RGD:13792537
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 14 91,782,281 91,867,828 RGD:1624291
G Insm1 INSM transcriptional repressor 1 JBrowse link 3 140,427,961 140,430,467 RGD:1624291
G Irf1 interferon regulatory factor 1 JBrowse link 10 39,109,530 39,116,532 RGD:1600115
RGD:1624291
G Irf3 interferon regulatory factor 3 JBrowse link 1 100,992,244 100,997,202 RGD:1624291
G Irf4 interferon regulatory factor 4 JBrowse link 17 34,886,746 34,905,191 RGD:1624291
G Irf7 interferon regulatory factor 7 JBrowse link 1 214,249,388 214,252,909 RGD:1624291
G Irf8 interferon regulatory factor 8 JBrowse link 19 54,314,859 54,336,643 RGD:1624291
G Irf9 interferon regulatory factor 9 JBrowse link 15 34,282,936 34,288,981 RGD:1624291
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:8553931
G Jdp2 Jun dimerization protein 2 JBrowse link 6 109,464,910 109,505,591 RGD:1624291
RGD:13792537
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
RGD:13792537
G Junb JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 19 26,092,972 26,094,756 RGD:1624291
RGD:13792537
RGD:1600115
G Jund JunD proto-oncogene, AP-1 transcription factor subunit JBrowse link 16 20,485,028 20,486,707 RGD:1624291
RGD:13792537
G Kcnh8 potassium voltage-gated channel subfamily H member 8 JBrowse link 9 3,127,618 3,697,736 RGD:1298911
G Kcnip3 potassium voltage-gated channel interacting protein 3 JBrowse link 3 120,023,062 120,087,650 RGD:1624291
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:1624291
G Kdm2b lysine demethylase 2B JBrowse link 12 39,021,924 39,161,954 RGD:1624291
G Kdm6a lysine demethylase 6A JBrowse link X 4,805,493 4,945,788 RGD:1624291
RGD:13792537
G Kdm6b lysine demethylase 6B JBrowse link 10 56,000,494 56,009,582 RGD:13792537
G Klf1 Kruppel like factor 1 JBrowse link 19 26,016,289 26,019,557 RGD:1624291
G Klf10 Kruppel-like factor 10 JBrowse link 7 77,156,010 77,162,096 RGD:1624291
G Klf13 Kruppel-like factor 13 JBrowse link 1 124,772,596 124,803,363 RGD:1624291
G Klf15 Kruppel-like factor 15 JBrowse link 4 122,364,688 122,377,690 RGD:1624291
G Klf16 Kruppel-like factor 16 JBrowse link 7 12,006,710 12,016,529 RGD:1624291
G Klf17 Kruppel-like factor 17 JBrowse link 5 136,602,472 136,610,058 RGD:1624291
G Klf4 Kruppel like factor 4 JBrowse link 5 72,283,311 72,287,669 RGD:1624291
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
G Klf6 Kruppel-like factor 6 JBrowse link 17 67,887,939 67,945,052 RGD:1624291
G Klf7 Kruppel like factor 7 JBrowse link 9 70,740,480 70,787,913 RGD:1624291
G Klf8 Kruppel-like factor 8 JBrowse link X 18,836,902 19,032,012 RGD:1624291
G Kmt2a lysine methyltransferase 2A JBrowse link 8 49,110,407 49,185,872 RGD:1624291
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1600115
RGD:13792537
RGD:1624291
G Lhx2 LIM homeobox 2 JBrowse link 3 22,628,674 22,658,447 RGD:1600115
RGD:1624291
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:1600115
G Litaf lipopolysaccharide-induced TNF factor JBrowse link 10 4,753,546 4,763,272 RGD:1624291
G LOC100361016 oocyte specific homeobox 5-like JBrowse link X 93,064,417 93,067,181 RGD:13792537
G LOC100909604 homeobox protein Hox-A6-like JBrowse link 4 82,259,273 82,270,004 RGD:13792537
G LOC100909657 uncharacterized LOC100909657 JBrowse link 4 149,902,278 149,909,841 RGD:1624291
G LOC100911511 homeobox protein Hox-A6-like RGD:13792537
G LOC100912282 calcium-binding and coiled-coil domain-containing protein 1-like JBrowse link 7 145,435,584 145,450,365 RGD:1600115
G LOC103689925 homeobox protein Hox-A9 JBrowse link 4 82,191,804 82,199,025 RGD:13792537
G LOC103692128 homeobox protein Hox-A9 JBrowse link 4 82,277,599 82,284,820 RGD:13792537
G LOC108348091 erythroid transcription factor JBrowse link X 15,374,725 15,382,575 RGD:1600115
RGD:13792537
G LOC108348320 homeobox protein Hox-A3 RGD:13792537
G LOC691325 similar to oocyte specific homeobox 3 JBrowse link 1 71,765,971 71,767,523 RGD:13792537
G Lrrfip1 LRR binding FLII interacting protein 1 JBrowse link 9 98,139,484 98,268,148 RGD:1624291
G Maf MAF bZIP transcription factor JBrowse link 19 48,179,826 48,200,995 RGD:13792537
G Mafa MAF bZIP transcription factor A JBrowse link 7 116,779,368 116,781,815 RGD:1624291
RGD:13792537
G Mafb MAF bZIP transcription factor B JBrowse link 3 156,338,993 156,340,913 RGD:1624291
RGD:13792537
G Maff MAF bZIP transcription factor F JBrowse link 7 120,580,743 120,592,095 RGD:13792537
G Mafg MAF bZIP transcription factor G JBrowse link 10 109,802,877 109,811,476 RGD:1624291
RGD:13792537
G Mafk MAF bZIP transcription factor K JBrowse link 12 16,923,989 16,934,706 RGD:13792537
G Max MYC associated factor X JBrowse link 6 99,984,260 100,011,460 RGD:1624291
G Maz MYC associated zinc finger protein JBrowse link 1 198,456,699 198,460,126 RGD:1624291
G Mecom MDS1 and EVI1 complex locus JBrowse link 2 117,396,084 117,993,604 RGD:1624291
G Med1 mediator complex subunit 1 JBrowse link 10 86,101,560 86,145,271 RGD:5128544
G Med12 mediator complex subunit 12 JBrowse link X 71,174,653 71,197,812 RGD:1600115
RGD:1624291
G Mef2a myocyte enhancer factor 2a JBrowse link 1 128,207,715 128,341,681 RGD:1624291
RGD:13792537
RGD:1600115
G Mef2b myocyte enhancer factor 2B JBrowse link 16 21,001,204 21,017,651 RGD:1624291
RGD:13792537
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1600115
RGD:13792537
RGD:1624291
G Mef2d myocyte enhancer factor 2D JBrowse link 2 187,511,775 187,541,285 RGD:1624291
RGD:13792537
RGD:1600115
G Meis1 Meis homeobox 1 JBrowse link 14 103,182,178 103,321,809 RGD:1624291
G Meis2 Meis homeobox 2 JBrowse link 3 107,560,172 107,762,732 RGD:1624291
G Meox1 mesenchyme homeobox 1 JBrowse link 10 89,797,011 89,817,009 RGD:1624291
G Meox2 mesenchyme homeobox 2 JBrowse link 6 56,625,768 56,689,195 RGD:1624291
RGD:1600115
G Mesp1 mesoderm posterior bHLH transcription factor 1 JBrowse link 1 141,532,390 141,533,908 RGD:1624291
RGD:13792537
G Mesp2 mesoderm posterior bHLH transcription factor 2 JBrowse link 1 141,550,633 141,553,239 RGD:1624291
RGD:13792537
G Mir208b microRNA 208b JBrowse link 15 33,639,510 33,639,621 RGD:1624291
G Mitf melanocyte inducing transcription factor JBrowse link 4 130,172,484 130,425,496 RGD:1624291
G Mixl1 Mix paired-like homeobox 1 JBrowse link 13 97,278,258 97,282,299 RGD:1624291
RGD:13792537
G Mkx mohawk homeobox JBrowse link 17 60,537,615 60,553,284 RGD:1624291
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:1624291
G Msc musculin JBrowse link 5 3,954,902 3,956,974 RGD:1600115
RGD:1624291
G Msgn1 mesogenin 1 JBrowse link 6 36,876,165 36,876,805 RGD:13792537
G Msx2 msh homeobox 2 JBrowse link 17 11,683,862 11,689,527 RGD:5132614
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:1600115
RGD:1624291
G Mtf1 metal-regulatory transcription factor 1 JBrowse link 5 142,797,340 142,843,896 RGD:1624291
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:1624291
G Mxd1 max dimerization protein 1 JBrowse link 4 118,451,752 118,472,150 RGD:1624291
G Myb MYB proto-oncogene, transcription factor JBrowse link 1 16,658,178 16,690,135 RGD:1624291
G Mybl1 MYB proto-oncogene like 1 JBrowse link 5 9,279,756 9,315,112 RGD:1624291
G Mybl2 MYB proto-oncogene like 2 JBrowse link 3 159,421,638 159,450,087 RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
RGD:13792537
G Mycl MYCL proto-oncogene, bHLH transcription factor JBrowse link 5 140,691,947 140,698,837 RGD:13792537
G Mycn MYCN proto-oncogene, bHLH transcription factor JBrowse link 6 38,222,554 38,228,419 RGD:1624291
RGD:13792537
G Mycs myc-like oncogene, s-myc protein JBrowse link X 17,823,554 17,824,846 RGD:13792537
G Myef2 myelin expression factor 2 JBrowse link 3 117,353,490 117,389,582 RGD:1624291
RGD:13792537
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:13792537
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:13792537
G Myocd myocardin JBrowse link 10 51,682,053 51,781,458 RGD:1600115
RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:13792537
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:8553747
RGD:13792537
RGD:1624291
G Mypop Myb-related transcription factor, partner of profilin JBrowse link 1 79,898,492 79,909,336 RGD:1624291
RGD:13792537
G Myt1 myelin transcription factor 1 JBrowse link 3 177,281,365 177,341,550 RGD:13792537
G Myt1l myelin transcription factor 1-like JBrowse link 6 48,452,385 48,843,443 RGD:13792537
G Mzf1 myeloid zinc finger 1 JBrowse link 1 65,520,827 65,533,233 RGD:1624291
G Nacc2 NACC family member 2 JBrowse link 3 3,508,084 3,574,787 RGD:1624291
RGD:1600115
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:13792537
G Ncoa2 nuclear receptor coactivator 2 JBrowse link 5 5,466,544 5,696,540 RGD:1624291
RGD:1600115
G Ndn necdin, MAGE family member JBrowse link 1 122,981,755 122,983,354 RGD:1624291
G Neurod1 neuronal differentiation 1 JBrowse link 3 66,414,314 66,417,617 RGD:1624291
G Neurod6 neuronal differentiation 6 JBrowse link 4 85,911,861 85,915,107 RGD:1624291
G Neurog3 neurogenin 3 JBrowse link 20 31,761,419 31,762,893 RGD:1624291
G NEWGENE_1310011 Mix paired-like homeobox JBrowse link 13 98,972,959 98,975,426 RGD:13792537
G Nfat5 nuclear factor of activated T-cells 5 JBrowse link 19 38,446,059 38,533,735 RGD:1600115
RGD:13792537
RGD:1624291
G Nfatc1 nuclear factor of activated T-cells 1 JBrowse link 18 77,203,517 77,322,690 RGD:1624291
RGD:13792537
G Nfatc2 nuclear factor of activated T-cells 2 JBrowse link 3 165,241,750 165,374,644 RGD:1624291
RGD:13792537
G Nfatc3 nuclear factor of activated T-cells 3 JBrowse link 19 38,039,542 38,114,003 RGD:1624291
RGD:13792537
G Nfatc4 nuclear factor of activated T-cells 4 JBrowse link 15 34,493,163 34,502,238 RGD:13792537
RGD:1624291
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1624291
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1600115
RGD:1624291
G Nfe2l3 nuclear factor, erythroid 2-like 3 JBrowse link 4 81,205,214 81,233,068 RGD:1624291
G Nfia nuclear factor I/A JBrowse link 5 116,421,895 116,750,381 RGD:1624291
RGD:1600115
G Nfib nuclear factor I/B JBrowse link 5 100,436,343 100,647,962 RGD:1624291
G Nfic nuclear factor I/C JBrowse link 7 11,151,941 11,179,544 RGD:1624291
G Nfil3 nuclear factor, interleukin 3 regulated JBrowse link 17 12,261,102 12,276,316 RGD:1624291
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:1624291
RGD:1600115
G Nfkb2 nuclear factor kappa B subunit 2 JBrowse link 1 266,050,634 266,059,277 RGD:1624291
G Nfya nuclear transcription factor Y subunit alpha JBrowse link 9 14,551,752 14,577,002 RGD:1600115
RGD:13792537
RGD:1624291
G Nfyb nuclear transcription factor Y subunit beta JBrowse link 7 27,081,667 27,097,481 RGD:1624291
RGD:13792537
G Nfyc nuclear transcription factor Y subunit gamma JBrowse link 5 139,687,442 139,760,154 RGD:1624291
RGD:13792537
G Nhlh2 nescient helix loop helix 2 JBrowse link 2 204,427,577 204,432,946 RGD:1624291
G Nkrf NFKB repressing factor JBrowse link X 123,502,074 123,516,301 RGD:1624291
RGD:13792537
G Nkx1-1 NK1 homeobox 1 JBrowse link 14 82,603,538 82,607,031 RGD:13792537
G Nkx1-2 NK1 homeobox 2 JBrowse link 1 204,603,116 204,605,552 RGD:13792537
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1600115
RGD:13792537
RGD:1624291
G Nkx2-2 NK2 homeobox 2 JBrowse link 3 141,408,460 141,419,083 RGD:13792537
RGD:1624291
G Nkx2-3 NK2 homeobox 3 JBrowse link 1 263,361,238 263,371,043 RGD:13792537
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1600115
RGD:13792537
RGD:1624291
G Nkx2-6 NK2 homeobox 6 JBrowse link 15 51,034,620 51,038,715 RGD:13792537
G Nkx2-8 NK2 homeobox 8 JBrowse link 6 77,506,882 77,508,585 RGD:1624291
RGD:13792537
G Nkx3-1 NK3 homeobox 1 JBrowse link 15 51,065,316 51,067,908 RGD:1600115
RGD:13792537
RGD:1624291
G Nkx3-2 NK3 homeobox 2 JBrowse link 14 73,813,531 73,818,489 RGD:1624291
RGD:13792537
G Nkx6-1 NK6 homeobox 1 JBrowse link 14 9,555,264 9,562,197 RGD:2306242
RGD:13792537
G Nkx6-2 NK6 homeobox 2 JBrowse link 1 211,922,389 211,923,929 RGD:1624291
RGD:13792537
G Nkx6-3 NK6 homeobox 3 JBrowse link 16 73,665,269 73,670,482 RGD:13792537
G Nlrc5 NLR family, CARD domain containing 5 JBrowse link 19 10,904,381 11,006,202 RGD:1624291
G Nobox NOBOX oogenesis homeobox JBrowse link 4 72,749,239 72,757,066 RGD:1624291
G Nono non-POU domain containing, octamer-binding JBrowse link X 71,324,365 71,342,225 RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1600115
RGD:1624291
G Noto notochord homeobox JBrowse link 4 117,206,355 117,210,856 RGD:13792537
G Npas4 neuronal PAS domain protein 4 JBrowse link 1 220,260,310 220,278,177 RGD:1624291
RGD:1600115
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1624291
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 JBrowse link 15 8,730,871 8,757,165 RGD:1600115
RGD:1624291
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 1 100,554,577 100,559,896 RGD:8661622
RGD:1624291
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 3 80,004,130 80,014,197 RGD:1600115
RGD:1624291
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1624291
RGD:1600115
RGD:70562
G Nr2c1 nuclear receptor subfamily 2, group C, member 1 JBrowse link 7 35,069,807 35,122,810 RGD:1624291
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 JBrowse link 4 124,005,287 124,030,349 RGD:1624291
RGD:1600115
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
RGD:1600115
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:1624291
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 JBrowse link 2 5,569,954 5,579,894 RGD:1624291
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 JBrowse link 16 19,769,968 19,777,414 RGD:1600115
RGD:1624291
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:1624291
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 JBrowse link 7 142,899,358 142,920,216 RGD:13792537
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:8553440
RGD:13792537
RGD:1600115
RGD:1624291
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1624291
RGD:13792537
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 JBrowse link 3 22,998,900 23,020,441 RGD:1624291
RGD:1600115
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 JBrowse link 13 53,750,470 53,870,288 RGD:1624291
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 JBrowse link 3 23,029,222 23,218,050 RGD:1600115
RGD:1624291
G Nrf1 nuclear respiratory factor 1 JBrowse link 4 57,335,732 57,445,317 RGD:1624291
RGD:1600115
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 11 14,658,225 14,742,478 RGD:1624291
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:1624291
RGD:13792537
G Nsd1 nuclear receptor binding SET domain protein 1 JBrowse link 17 9,840,859 9,955,391 RGD:1624291
G Obox2 oocyte specific homeobox 2 JBrowse link 1 71,782,600 71,787,244 RGD:13792537
G Onecut1 one cut homeobox 1 JBrowse link 8 81,765,779 81,799,894 RGD:1624291
RGD:1600115
G Onecut2 one cut homeobox 2 JBrowse link 18 59,830,375 59,882,490 RGD:1624291
RGD:1600115
G Otx1 orthodenticle homeobox 1 JBrowse link 14 106,861,556 106,864,933 RGD:1624291
RGD:1600115
G Otx2 orthodenticle homeobox 2 JBrowse link 15 25,500,037 25,511,619 RGD:1624291
G Ovol1 ovo like transcriptional repressor 1 JBrowse link 1 220,927,309 220,938,814 RGD:1624291
G Patz1 POZ (BTB) and AT hook containing zinc finger 1 JBrowse link 14 83,509,763 83,528,898 RGD:1624291
G Pax1 paired box 1 JBrowse link 3 141,577,124 141,589,849 RGD:1624291
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:1624291
G Pax4 paired box 4 JBrowse link 4 55,735,640 55,753,461 RGD:1600115
RGD:1624291
G Pax5 paired box 5 JBrowse link 5 60,007,587 60,191,973 RGD:1624291
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1600115
RGD:1624291
RGD:8552352
G Pax8 paired box 8 JBrowse link 3 1,527,316 1,586,019 RGD:8661624
RGD:1624291
RGD:1600115
G Paxbp1 PAX3 and PAX7 binding protein 1 JBrowse link 11 31,184,456 31,213,891 RGD:13792537
G Pbx1 PBX homeobox 1 JBrowse link 13 86,390,741 86,671,460 RGD:1624291
G Pbx3 PBX homeobox 3 JBrowse link 3 13,241,031 13,436,084 RGD:1600115
RGD:1624291
G Pdx1 pancreatic and duodenal homeobox 1 JBrowse link 12 9,496,044 9,501,211 RGD:13792537
RGD:1624291
G Per1 period circadian regulator 1 JBrowse link 10 55,681,761 55,696,557 RGD:1624291
G Per2 period circadian regulator 2 JBrowse link 9 98,555,154 98,597,362 RGD:1624291
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:1624291
RGD:1600115
G Phox2a paired-like homeobox 2a JBrowse link 1 166,893,734 166,898,252 RGD:631925
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:1624291
G Pitx1 paired-like homeodomain 1 JBrowse link 17 8,873,184 8,884,428 RGD:1624291
RGD:13792537
G Pitx2 paired-like homeodomain 2 JBrowse link 2 233,602,732 233,621,059 RGD:5132604
RGD:13792537
G Pitx3 paired-like homeodomain 3 JBrowse link 1 265,886,766 265,899,947 RGD:1624291
RGD:13792537
G Pknox1 PBX/knotted 1 homeobox 1 JBrowse link 20 10,331,608 10,358,922 RGD:1624291
RGD:1600115
G Plag1 PLAG1 zinc finger JBrowse link 5 16,788,186 16,842,827 RGD:1624291
G Pou1f1 POU class 1 homeobox 1 JBrowse link 11 2,645,659 2,662,581 RGD:8661635
G Pou2af1 POU class 2 homeobox associating factor 1 JBrowse link 8 55,603,968 55,631,448 RGD:1624291
G Pou2f1 POU class 2 homeobox 1 JBrowse link 13 84,075,316 84,217,368 RGD:1600115
RGD:1624291
G Pou2f2 POU class 2 homeobox 2 JBrowse link 1 81,966,791 82,049,116 RGD:1624291
G Pou2f3 POU class 2 homeobox 3 JBrowse link 8 47,412,063 47,495,042 RGD:1624291
RGD:1600115
G Pou3f1 POU class 3 homeobox 1 JBrowse link 5 142,643,599 142,646,580 RGD:729433
G Pou3f2 POU class 3 homeobox 2 JBrowse link 5 36,677,452 36,683,356 RGD:1624291
RGD:1600115
G Pou4f1 POU class 4 homeobox 1 JBrowse link 15 88,618,255 88,622,712 RGD:1600115
RGD:1624291
G Pou4f2 POU class 4 homeobox 2 JBrowse link 19 33,160,180 33,163,821 RGD:1624291
G Pou4f3 POU class 4 homeobox 3 JBrowse link 18 36,713,869 36,716,461 RGD:1624291
G Pou5f1 POU class 5 homeobox 1 JBrowse link 20 3,747,231 3,751,994 RGD:1624291
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:1624291
G Prdm1 PR/SET domain 1 JBrowse link 20 49,464,921 49,556,623 RGD:1624291
G Prdm15 PR/SET domain 15 JBrowse link 11 38,294,040 38,354,648 RGD:1624291
G Prdm4 PR/SET domain 4 JBrowse link 7 23,959,932 23,986,535 RGD:1624291
RGD:1600115
G Prdm5 PR/SET domain 5 JBrowse link 4 96,659,062 96,810,816 RGD:1624291
G Preb prolactin regulatory element binding JBrowse link 6 26,784,088 26,787,875 RGD:61705
G Prop1 PROP paired-like homeobox 1 JBrowse link 10 36,449,920 36,452,381 RGD:1600115
RGD:1624291
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
G Prrx1 paired related homeobox 1 JBrowse link 13 81,147,038 81,215,559 RGD:1624291
G Ptf1a pancreas associated transcription factor 1a JBrowse link 17 86,199,623 86,201,477 RGD:10047301
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 5 72,103,704 72,141,701 RGD:1624291
G Rax retina and anterior neural fold homeobox JBrowse link 18 61,638,352 61,642,056 RGD:1624291
RGD:1600115
G Rbbp4 RB binding protein 4, chromatin remodeling factor JBrowse link 5 147,499,880 147,535,240 RGD:1624291
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:1624291
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:1624291
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 14 59,657,738 59,865,427 RGD:1624291
G Rbpjl recombination signal binding protein for immunoglobulin kappa J region-like JBrowse link 3 160,851,836 160,865,125 RGD:1600115
G Rbpjl2 recombination signal binding protein for immunoglobulin kappa J region-like 2 JBrowse link 5 4,877,924 4,879,637 RGD:1600115
G Rel REL proto-oncogene, NF-kB subunit JBrowse link 14 108,490,794 108,517,582 RGD:1624291
RGD:1600115
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:11059577
RGD:1624291
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link 1 80,517,081 80,545,019 RGD:1624291
G Rest RE1-silencing transcription factor JBrowse link 14 33,131,985 33,152,019 RGD:1600115
RGD:1624291
G Rfx1 regulatory factor X1 JBrowse link 19 25,181,564 25,212,410 RGD:13792537
G Rfx2 regulatory factor X2 JBrowse link 9 10,216,194 10,283,467 RGD:11041022
RGD:13792537
RGD:1624291
RGD:1600115
RGD:11041070
G Rfx3 regulatory factor X3 JBrowse link 1 245,853,332 246,110,648 RGD:13792537
G Rfx4 regulatory factor X4 JBrowse link 7 25,831,358 25,909,976 RGD:1624291
RGD:13792537
G Rfx5 regulatory factor X5 JBrowse link 2 196,119,054 196,128,109 RGD:13792537
G Rfx6 regulatory factor X, 6 JBrowse link 20 32,709,282 32,764,040 RGD:13792537
G Rfx7 regulatory factor X, 7 JBrowse link 8 79,159,297 79,279,962 RGD:13792537
G Rfx8 RFX family member 8, lacking RFX DNA binding domain JBrowse link 9 46,414,407 46,476,076 RGD:13792537
G RGD1564236 similar to OBOX3 JBrowse link 9 101,196,199 101,198,944 RGD:13792537
G Rora RAR-related orphan receptor A JBrowse link 8 75,515,886 75,616,477 RGD:1624291
G Rorb RAR-related orphan receptor B JBrowse link 1 234,252,757 234,442,597 RGD:1600115
RGD:1624291
G Rorc RAR-related orphan receptor C JBrowse link 2 195,612,471 195,636,797 RGD:1624291
G Rreb1 ras responsive element binding protein 1 JBrowse link 17 27,539,137 27,718,878 RGD:1624291
RGD:13792537
G Runx1 RUNX family transcription factor 1 JBrowse link 11 32,765,147 33,003,061 RGD:1600115
RGD:1624291
G Runx2 RUNX family transcription factor 2 JBrowse link 9 18,564,743 18,773,092 RGD:1600115
RGD:1624291
G Ruvbl2 RuvB-like AAA ATPase 2 JBrowse link 1 101,413,766 101,426,970 RGD:1624291
RGD:1600115
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1624291
G Rxrb retinoid X receptor beta JBrowse link 20 3,822,673 3,829,138 RGD:1624291
G Safb scaffold attachment factor B JBrowse link 9 10,450,216 10,471,174 RGD:1600115
RGD:1624291
G Sall1 spalt-like transcription factor 1 JBrowse link 19 23,387,737 23,405,025 RGD:1624291
G Sars1 seryl-tRNA synthetase 1 JBrowse link 2 211,219,743 211,235,475 RGD:1600115
RGD:1624291
G Satb2 SATB homeobox 2 JBrowse link 9 63,456,877 63,642,193 RGD:1600115
RGD:1624291
G Scx scleraxis bHLH transcription factor JBrowse link 7 117,519,075 117,521,093 RGD:1624291
G Sfpq splicing factor proline and glutamine rich JBrowse link 5 145,079,803 145,088,517 RGD:1624291
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:1624291
G Six2 SIX homeobox 2 JBrowse link 6 8,952,572 8,955,893 RGD:1624291
G Six3 SIX homeobox 3 JBrowse link 6 8,886,730 8,891,094 RGD:1624291
RGD:1600115
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
G Six5 SIX homeobox 5 JBrowse link 1 80,000,106 80,005,303 RGD:1624291
G Six6 SIX homeobox 6 JBrowse link 6 95,816,749 95,821,729 RGD:1600115
RGD:1624291
G Skil SKI-like proto-oncogene JBrowse link 2 115,862,932 115,891,304 RGD:1624291
G Smad1 SMAD family member 1 JBrowse link 19 32,182,942 32,248,694 RGD:1624291
RGD:1600115
G Smad2 SMAD family member 2 JBrowse link 18 72,550,107 72,612,078 RGD:1624291
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:1624291
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:1624291
RGD:1600115
G Smad5 SMAD family member 5 JBrowse link 17 8,307,448 8,336,996 RGD:1624291
G Smad6 SMAD family member 6 JBrowse link 8 68,897,746 68,967,221 RGD:1624291
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
G Smyd3 SET and MYND domain containing 3 JBrowse link 13 97,330,120 97,807,813 RGD:1624291
G Snai3 snail family transcriptional repressor 3 JBrowse link 19 55,276,211 55,290,031 RGD:1624291
G Sox1 SRY-box transcription factor 1 RGD:1624291
G Sox10 SRY-box transcription factor 10 JBrowse link 7 120,393,238 120,403,523 RGD:1624291
G Sox11 SRY-box transcription factor 11 JBrowse link 6 46,629,967 46,631,988 RGD:1624291
G Sox15 SRY-box transcription factor 15 JBrowse link 10 56,260,514 56,263,503 RGD:1624291
G Sox18 SRY-box transcription factor 18 JBrowse link 3 177,177,237 177,179,039 RGD:1624291
G Sox2 SRY-box transcription factor 2 JBrowse link 2 121,165,137 121,167,545 RGD:1624291
G Sox21 SRY-box transcription factor 21 JBrowse link 15 103,438,674 103,441,405 RGD:1624291
G Sox4 SRY-box transcription factor 4 JBrowse link 17 37,615,022 37,619,728 RGD:1624291
G Sox5 SRY-box transcription factor 5 JBrowse link 4 178,062,267 179,031,991 RGD:1624291
G Sox6 SRY-box transcription factor 6 JBrowse link 1 185,631,702 186,186,192 RGD:1624291
G Sox9 SRY-box transcription factor 9 JBrowse link 10 101,288,528 101,294,030 RGD:1600115
RGD:1624291
G Sp1 Sp1 transcription factor JBrowse link 7 144,014,173 144,044,635 RGD:11059577
RGD:1624291
RGD:1600115
G Sp2 Sp2 transcription factor JBrowse link 10 84,890,930 84,920,886 RGD:1624291
G Sp3 Sp3 transcription factor JBrowse link 3 59,644,579 59,689,011 RGD:1624291
G Sp7 Sp7 transcription factor JBrowse link 7 143,957,316 143,967,488 RGD:1624291
G Spi1 Spi-1 proto-oncogene JBrowse link 3 79,918,127 79,937,708 RGD:1624291
G Spib Spi-B transcription factor JBrowse link 1 100,531,538 100,537,397 RGD:1624291
G Spic Spi-C transcription factor JBrowse link 7 29,225,721 29,233,452 RGD:1624291
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:8553473
RGD:13792537
RGD:1624291
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link 7 123,381,082 123,438,605 RGD:1624291
RGD:13792537
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G St18 ST18 C2H2C-type zinc finger transcription factor JBrowse link 5 12,437,617 12,787,223 RGD:1600115
RGD:13792537
RGD:1624291
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:1624291
RGD:13792537
G Stat2 signal transducer and activator of transcription 2 JBrowse link 7 2,691,064 2,707,530 RGD:13792537
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:1624291
RGD:13792537
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:1624291
RGD:13792537
G Stat5a signal transducer and activator of transcription 5A JBrowse link 10 88,764,732 88,789,060 RGD:1624291
RGD:13792537
G Stat5b signal transducer and activator of transcription 5B JBrowse link 10 88,686,207 88,712,313 RGD:1624291
RGD:13792537
RGD:1600115
G Stat6 signal transducer and activator of transcription 6 JBrowse link 7 70,946,228 70,963,542 RGD:13792537
RGD:1624291
G Stk16 serine/threonine kinase 16 JBrowse link 9 82,411,010 82,414,249 RGD:727297
G Sub1 SUB1 regulator of transcription JBrowse link 2 62,019,902 62,034,704 RGD:1600115
RGD:1624291
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 10 67,325,101 67,371,588 RGD:1624291
RGD:1600115
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link 5 133,864,401 133,878,604 RGD:1624291
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:1624291
G Tbp TATA box binding protein JBrowse link 1 57,491,381 57,509,335 RGD:1624291
RGD:13792537
G Tbpl1 TATA-box binding protein like 1 JBrowse link 1 23,977,154 24,002,512 RGD:1624291
RGD:13792537
G Tbpl2 TATA box binding protein-like 2 JBrowse link 3 1,095,883 1,116,677 RGD:13792537
G Tbr1 T-box brain transcription factor 1 JBrowse link 3 47,677,720 47,685,902 RGD:1624291
G Tbx15 T-box transcription factor 15 JBrowse link 2 201,289,042 201,390,752 RGD:1624291
G Tbx18 T-box transcription factor 18 JBrowse link 8 95,359,354 95,387,363 RGD:1624291
G Tbx19 T-box transcription factor 19 JBrowse link 13 83,403,263 83,426,305 RGD:1624291
G Tbx2 T-box transcription factor 2 JBrowse link 10 73,278,932 73,290,764 RGD:1624291
G Tbx20 T-box transcription factor 20 JBrowse link 8 25,849,394 25,904,570 RGD:1624291
G Tbx3 T-box transcription factor 3 JBrowse link 12 42,479,518 42,494,588 RGD:1624291
G Tbx5 T-box transcription factor 5 JBrowse link 12 42,059,688 42,148,226 RGD:1600115
RGD:1624291
G Tbx6 T-box transcription factor 6 JBrowse link 1 198,214,797 198,218,706 RGD:1600115
RGD:1624291
G Tbxt T-box transcription factor T JBrowse link 1 52,887,067 52,900,691 RGD:1624291
G Tcf12 transcription factor 12 JBrowse link 8 78,343,634 78,657,738 RGD:1624291
RGD:13792537
G Tcf15 transcription factor 15 JBrowse link 3 147,643,250 147,649,511 RGD:1624291
G Tcf20 transcription factor 20 JBrowse link 7 123,670,135 123,767,797 RGD:1624291
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:1624291
RGD:13792537
G Tcf4 transcription factor 4 JBrowse link 18 65,285,320 65,507,983 RGD:1624291
RGD:13792537
G Tcf7 transcription factor 7 JBrowse link 10 37,616,033 37,646,027 RGD:1624291
RGD:13792537
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
G Tcfl5 transcription factor like 5 JBrowse link 3 176,124,846 176,144,531 RGD:1624291
G Tead1 TEA domain transcription factor 1 JBrowse link 1 177,495,500 177,714,795 RGD:1624291
G Tead2 TEA domain transcription factor 2 JBrowse link 1 101,213,782 101,230,483 RGD:1600115
RGD:1624291
G Tead4 TEA domain transcription factor 4 JBrowse link 4 161,542,566 161,619,848 RGD:1624291
G Tef TEF transcription factor, PAR bZIP family member JBrowse link 7 123,033,971 123,058,606 RGD:70036
G Tfap2a transcription factor AP-2 alpha JBrowse link 17 24,653,342 24,670,457 RGD:1624291
RGD:1600115
G Tfap2b transcription factor AP-2 beta JBrowse link 9 25,410,669 25,440,568 RGD:1624291
G Tfap2c transcription factor AP-2 gamma JBrowse link 3 170,550,314 170,558,197 RGD:1624291
G Tfap2e transcription factor AP-2 epsilon JBrowse link 5 144,740,950 144,761,787 RGD:1624291
G Tfap4 transcription factor AP-4 JBrowse link 10 11,204,616 11,222,975 RGD:1624291
G Tfcp2 transcription factor CP2 JBrowse link 7 142,138,836 142,181,036 RGD:1624291
G Tfe3 transcription factor binding to IGHM enhancer 3 JBrowse link X 15,574,579 15,587,826 RGD:1624291
G Tfeb transcription factor EB JBrowse link 9 15,208,141 15,264,101 RGD:1624291
G Tfec transcription factor EC JBrowse link 4 44,063,533 44,136,815 RGD:70037
G Tgif1 TGFB-induced factor homeobox 1 JBrowse link 9 119,181,079 119,190,698 RGD:1624291
G Thap1 THAP domain containing 1 JBrowse link 16 70,661,360 70,665,831 RGD:1624291
G Thap11 THAP domain containing 11 JBrowse link 19 37,825,576 37,827,393 RGD:1624291
RGD:13792537
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link 5 144,178,248 144,221,318 RGD:1600115
RGD:1624291
G Tlx1 T-cell leukemia, homeobox 1 JBrowse link 1 264,893,033 264,899,424 RGD:1624291
G Top1 DNA topoisomerase I JBrowse link 3 156,635,688 156,717,686 RGD:1600115
RGD:1624291
G Tox2 TOX high mobility group box family member 2 JBrowse link 3 159,569,329 159,694,756 RGD:1624291
RGD:1600115
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
RGD:1600115
G Tp73 tumor protein p73 JBrowse link 5 171,355,876 171,415,354 RGD:1624291
G Tsc22d1 TSC22 domain family, member 1 JBrowse link 15 58,554,358 58,658,156 RGD:12911008
G Txk TXK tyrosine kinase JBrowse link 14 38,029,809 38,085,822 RGD:1624291
G Usf2 upstream transcription factor 2, c-fos interacting JBrowse link 1 89,371,798 89,383,005 RGD:634234
G Usp3 ubiquitin specific peptidase 3 JBrowse link 8 72,207,970 72,284,871 RGD:8657120
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked JBrowse link Y 1,065,274 1,206,127 RGD:1624291
G Vax1 ventral anterior homeobox 1 JBrowse link 1 280,334,897 280,338,813 RGD:13792537
G Vax2 ventral anterior homeobox 2 JBrowse link 4 115,388,839 115,412,515 RGD:13792537
G Wbp2 WW domain binding protein 2 JBrowse link 10 104,629,563 104,637,906 RGD:1600115
RGD:1624291
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:1600115
RGD:1624291
G Yap1 Yes1 associated transcriptional regulator JBrowse link 8 6,133,014 6,204,240 RGD:1624291
G Ybx1 Y box binding protein 1 JBrowse link 5 138,319,754 138,336,721 RGD:1624291
RGD:1600115
G Yy1 YY1 transcription factor JBrowse link 6 132,702,443 132,726,848 RGD:1624291
RGD:13792537
G Yy2 YY2 transcription factor JBrowse link X 40,285,923 40,289,545 RGD:13792537
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link 8 52,980,226 53,146,765 RGD:1624291
RGD:1600115
G Zbtb17 zinc finger and BTB domain containing 17 JBrowse link 5 159,993,799 160,014,899 RGD:1624291
G Zbtb2 zinc finger and BTB domain containing 2 JBrowse link 1 40,914,175 40,933,586 RGD:1624291
G Zbtb7a zinc finger and BTB domain containing 7a JBrowse link 7 11,429,266 11,446,119 RGD:1624291
RGD:13792537
RGD:1600115
G Zbtb7b zinc finger and BTB domain containing 7B JBrowse link 2 188,704,989 188,719,674 RGD:1624291
RGD:13792537
G Zfhx2 zinc finger homeobox 2 JBrowse link 15 33,719,313 33,752,665 RGD:13792537
G Zfhx3 zinc finger homeobox 3 JBrowse link 19 42,753,983 42,925,794 RGD:1624291
RGD:13792537
G Zfhx4 zinc finger homeobox 4 JBrowse link 2 98,423,565 98,610,368 RGD:13792537
G Zfp143 zinc finger protein 143 JBrowse link 1 174,702,310 174,738,133 RGD:1624291
RGD:1600115
G Zfp148 zinc finger protein 148 JBrowse link 11 70,509,909 70,618,422 RGD:1624291
G Zfp161 zinc finger protein 161 JBrowse link 9 117,739,067 117,744,273 RGD:1624291
G Zfp202 zinc finger protein 202 JBrowse link 8 44,047,586 44,068,990 RGD:1624291
G Zfp217 zinc finger protein 217 JBrowse link 3 166,981,419 167,022,349 RGD:1624291
G Zfp219 zinc finger protein 219 JBrowse link 15 28,402,412 28,417,379 RGD:1624291
G Zfp277 zinc finger protein 277 JBrowse link 6 60,246,209 60,374,388 RGD:1624291
G Zfp281 zinc finger protein 281 JBrowse link 13 53,531,080 53,534,399 RGD:1624291
G Zfp335 zinc finger protein 335 JBrowse link 3 161,357,201 161,378,073 RGD:1624291
RGD:1600115
G Zfp384 zinc finger protein 384 JBrowse link 4 157,523,083 157,552,606 RGD:1299381
G Zfp395 zinc finger protein 395 JBrowse link 15 48,789,320 48,803,025 RGD:1624291
G Zfp42 zinc finger protein 42 JBrowse link 16 52,016,590 52,026,346 RGD:1624291
G Zfp467 zinc finger protein 467 JBrowse link 4 78,068,822 78,077,962 RGD:1624291
G Zfp536 zinc finger protein 536 JBrowse link 1 93,689,114 94,155,457 RGD:1624291
G Zfp639 zinc finger protein 639 JBrowse link 2 118,906,479 118,917,491 RGD:1624291
G Zfp668 zinc finger protein 668 JBrowse link 1 199,310,935 199,321,231 RGD:1624291
G Zfp683 zinc finger protein 683 JBrowse link 5 152,280,982 152,288,208 RGD:1624291
G Zfp692 zinc finger protein 692 JBrowse link 10 43,740,739 43,752,713 RGD:1624291
G Zfp746 zinc finger protein 746 JBrowse link 4 77,723,182 77,747,511 RGD:1624291
G Zfpm1 zinc finger protein, multitype 1 JBrowse link 19 55,094,585 55,150,994 RGD:1624291
G Zgpat zinc finger CCCH-type and G-patch domain containing JBrowse link 3 176,865,078 176,881,603 RGD:1624291
G Zic1 Zic family member 1 JBrowse link 8 98,733,715 98,738,960 RGD:1624291
G Zic2 Zic family member 2 JBrowse link 15 108,908,366 108,913,812 RGD:1624291
G Zic3 Zic family member 3 JBrowse link X 140,875,191 140,888,344 RGD:1624291
G Zkscan3 zinc finger with KRAB and SCAN domains 3 JBrowse link 17 45,247,724 45,263,422 RGD:1624291
G Znf750 zinc finger protein 750 JBrowse link 10 110,698,581 110,701,222 RGD:1624291
G Zscan21 zinc finger and SCAN domain containing 21 JBrowse link 12 19,262,977 19,277,913 RGD:1624291
cAMP response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:727574
RGD:1624291
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:1600115
G Atf6b activating transcription factor 6 beta JBrowse link 20 4,414,283 4,422,283 RGD:1600115
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:1624291
G Creb3 cAMP responsive element binding protein 3 JBrowse link 5 59,063,532 59,068,196 RGD:1600115
G Creb3l1 cAMP responsive element binding protein 3-like 1 JBrowse link 3 80,892,433 80,933,283 RGD:1624291
RGD:13792537
RGD:1600115
G Creb3l2 cAMP responsive element binding protein 3-like 2 JBrowse link 4 64,869,285 64,981,519 RGD:1624291
RGD:13792537
G Creb3l3 cAMP responsive element binding protein 3-like 3 JBrowse link 7 11,490,852 11,499,287 RGD:1600115
G Creb3l4 cAMP responsive element binding protein 3-like 4 JBrowse link 2 189,596,657 189,602,243 RGD:1600115
G E4f1 E4F transcription factor 1 JBrowse link 10 13,812,335 13,835,847 RGD:1624291
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1624291
RGD:1600115
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1600115
RGD:1624291
G Tcf12 transcription factor 12 JBrowse link 8 78,343,634 78,657,738 RGD:729997
carbohydrate response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:8554541
E-box binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:1624291
RGD:1600115
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 JBrowse link 4 181,103,774 181,158,415 RGD:1624291
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link 1 216,154,002 216,156,409 RGD:1624291
G Atoh8 atonal bHLH transcription factor 8 JBrowse link 4 100,067,341 100,099,517 RGD:1624291
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 4 140,703,619 140,709,319 RGD:1600115
RGD:1624291
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
RGD:1600115
G Ciart circadian associated repressor of transcription JBrowse link 2 197,987,705 197,991,198 RGD:1624291
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1600115
RGD:1624291
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1624291
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1624291
RGD:1600115
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 16 36,371,489 36,373,551 RGD:1624291
RGD:1600115
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:1624291
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:9685170
RGD:13792537
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Lmo2 LIM domain only 2 JBrowse link 3 93,909,156 93,931,888 RGD:1624291
G Max MYC associated factor X JBrowse link 6 99,984,260 100,011,460 RGD:1624291
G Mitf melanocyte inducing transcription factor JBrowse link 4 130,172,484 130,425,496 RGD:1624291
RGD:1600115
G Mybbp1a MYB binding protein 1a JBrowse link 10 59,000,400 59,010,794 RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
RGD:1600115
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:9686083
RGD:1624291
RGD:1600115
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:1600115
RGD:1624291
G Neurod1 neuronal differentiation 1 JBrowse link 3 66,414,314 66,417,617 RGD:1624291
G Neurod2 neuronal differentiation 2 JBrowse link 10 86,280,865 86,282,681 RGD:1600115
RGD:1624291
G Neurog1 neurogenin 1 JBrowse link 17 9,154,656 9,156,175 RGD:1624291
RGD:1600115
G Neurog2 neurogenin 2 JBrowse link 2 231,962,517 231,963,441 RGD:1624291
G Nono non-POU domain containing, octamer-binding JBrowse link X 71,324,365 71,342,225 RGD:1600115
RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Per1 period circadian regulator 1 JBrowse link 10 55,681,761 55,696,557 RGD:1624291
RGD:1600115
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:1600115
RGD:1624291
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:1624291
G Pspc1 paraspeckle component 1 JBrowse link 15 36,946,914 37,030,273 RGD:1600115
RGD:1624291
G Ptf1a pancreas associated transcription factor 1a JBrowse link 17 86,199,623 86,201,477 RGD:1624291
G Scx scleraxis bHLH transcription factor JBrowse link 7 117,519,075 117,521,093 RGD:1624291
G Sfpq splicing factor proline and glutamine rich JBrowse link 5 145,079,803 145,088,517 RGD:1624291
G Snai1 snail family transcriptional repressor 1 JBrowse link 3 164,274,710 164,279,199 RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link 7 123,381,082 123,438,605 RGD:1624291
RGD:1600115
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link 5 133,864,401 133,878,604 RGD:1624291
G Tcf12 transcription factor 12 JBrowse link 8 78,343,634 78,657,738 RGD:1624291
RGD:1600115
G Tcf21 transcription factor 21 JBrowse link 1 23,906,717 23,909,576 RGD:1624291
RGD:1600115
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:8553796
RGD:1600115
RGD:1624291
G Tcf4 transcription factor 4 JBrowse link 18 65,285,320 65,507,983 RGD:1600115
RGD:1624291
G Tfap4 transcription factor AP-4 JBrowse link 10 11,204,616 11,222,975 RGD:1624291
G Twist1 twist family bHLH transcription factor 1 JBrowse link 6 53,401,241 53,403,235 RGD:1624291
G Zeb1 zinc finger E-box binding homeobox 1 JBrowse link 17 54,656,627 54,714,920 RGD:1600115
RGD:1624291
estrogen response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:1600115
RGD:1624291
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:728646
RGD:1624291
RGD:1600115
G Tox3 TOX high mobility group box family member 3 JBrowse link 19 18,079,022 18,188,366 RGD:1600115
RGD:1624291
G Trim24 tripartite motif-containing 24 JBrowse link 4 65,632,278 65,684,746 RGD:1624291
N-box binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:9685391
RGD:13792537
RGD:1600115
RGD:1624291
retinoic acid-responsive element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myt1l myelin transcription factor 1-like JBrowse link 6 48,452,385 48,843,443 RGD:633486
RGD:12793025
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 JBrowse link 2 5,569,954 5,579,894 RGD:633499
G Rara retinoic acid receptor, alpha JBrowse link 10 86,838,819 86,884,224 RGD:1624291
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1600115
RGD:13792537
RGD:1624291
G Rxrb retinoid X receptor beta JBrowse link 20 3,822,673 3,829,138 RGD:13792537
G Rxrg retinoid X receptor gamma JBrowse link 13 85,818,473 85,868,555 RGD:13792537
G Zfp536 zinc finger protein 536 JBrowse link 1 93,689,114 94,155,457 RGD:1624291
RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cebpg CCAAT/enhancer binding protein gamma JBrowse link 1 91,286,956 91,297,459 RGD:69946
serum response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1624291
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
sterol response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 3 80,004,130 80,014,197 RGD:1624291
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:1624291
RGD:8553473
vitamin D response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1624291
RGD:1600115
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:1624291
RGD:1600115
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:1624291
RGD:13792537
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19528
    binding 15911
      organic cyclic compound binding 5784
        nucleic acid binding 3636
          regulatory region nucleic acid binding 994
            transcription regulatory region DNA binding 990
              transcription regulatory region sequence-specific DNA binding 881
                RNA polymerase II regulatory region sequence-specific DNA binding 838
                  RNA polymerase II cis-regulatory region sequence-specific DNA binding 633
                    E-box binding 47
                    N-box binding 2
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending 1
                    cAMP response element binding 14
                    carbohydrate response element binding 1
                    estrogen response element binding 4
                    juvenile hormone response element binding 0
                    retinoic acid-responsive element binding 7
                    serum response element binding 2
                    sterol response element binding 2
                    vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 19528
    binding 15911
      organic cyclic compound binding 5784
        nucleic acid binding 3636
          DNA binding 2000
            sequence-specific DNA binding 1178
              sequence-specific double-stranded DNA binding 922
                transcription regulatory region sequence-specific DNA binding 881
                  RNA polymerase II regulatory region sequence-specific DNA binding 838
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 633
                      E-box binding 47
                      N-box binding 2
                      RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending 1
                      cAMP response element binding 14
                      carbohydrate response element binding 1
                      estrogen response element binding 4
                      juvenile hormone response element binding 0
                      retinoic acid-responsive element binding 7
                      serum response element binding 2
                      sterol response element binding 2
                      vitamin D response element binding 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.