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ONTOLOGY REPORT - ANNOTATIONS


Term:transcriptional start site selection at RNA polymerase II promoter
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Accession:GO:0001174 term browser browse the term
Definition:Any process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.


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transcriptional start site selection at RNA polymerase II promoter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brf2 BRF2, RNA polymerase III transcription initiation factor subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:69,089,955...69,094,678
Ensembl chr16:69,089,955...69,094,680
JBrowse link
G Gtf2b general transcription factor IIB ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:10318856)
PMID:21873635
UniProt
Ensembl
RGD
PMID:10318856, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 2:248,709,433...248,727,741
Ensembl chr 2:248,715,281...248,727,741
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      organic substance metabolic process 11651
        macromolecule metabolic process 10086
          macromolecule biosynthetic process 5156
            RNA biosynthetic process 3477
              DNA-templated transcriptional start site selection 2
                transcriptional start site selection at RNA polymerase II promoter 2
                  regulation of transcriptional start site selection at RNA polymerase II promoter 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        cellular aromatic compound metabolic process 5715
          nucleobase-containing compound metabolic process 5489
            nucleic acid metabolic process 4985
              RNA metabolic process 4469
                RNA biosynthetic process 3477
                  nucleic acid-templated transcription 3463
                    transcription, DNA-templated 3418
                      DNA-templated transcription, initiation 124
                        DNA-templated transcriptional start site selection 2
                          transcriptional start site selection at RNA polymerase II promoter 2
                            regulation of transcriptional start site selection at RNA polymerase II promoter 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.