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ONTOLOGY REPORT - ANNOTATIONS


Term:outer dense fiber
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Accession:GO:0001520 term browser browse the term
Definition:A supramolecular fiber found in the flagella of mammalian sperm that surrounds the nine microtubule doublets. These dense fibers are stiff and noncontractile. In human, they consist of about 10 major and at least 15 minor proteins, where all major proteins are ODF1, ODF2 or ODF2-related proteins.
Synonyms:exact_synonym: outer dense fibre


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outer dense fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:1624291
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:5686399
G Ddx6 DEAD-box helicase 6 JBrowse link 8 48,924,768 48,961,394 RGD:10755411
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link 9 65,665,663 65,693,822 RGD:1624291
RGD:1600115
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link 20 42,966,140 42,971,838 RGD:9685331
G Odf1 outer dense fiber of sperm tails 1 JBrowse link 7 77,066,580 77,074,712 RGD:1624291
RGD:13792537
G Odf2 outer dense fiber of sperm tails 2 JBrowse link 3 8,449,733 8,495,764 RGD:69913
G Odf3 outer dense fiber of sperm tails 3 JBrowse link 1 213,596,784 213,602,417 RGD:1624291
RGD:13792537
G Odf4 outer dense fiber of sperm tails 4 JBrowse link 10 55,510,333 55,516,315 RGD:1624291
G Pmfbp1 polyamine modulated factor 1 binding protein 1 JBrowse link 19 42,132,551 42,196,990 RGD:724397
G Rsph1 radial spoke head component 1 JBrowse link 20 9,998,698 10,020,719 RGD:1624291
G Txndc2 thioredoxin domain containing 2 JBrowse link 9 113,354,047 113,358,558 RGD:1549680

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20118
    cellular anatomical entity 19774
      supramolecular complex 1239
        supramolecular polymer 922
          supramolecular fiber 915
            polymeric cytoskeletal fiber 680
              outer dense fiber 12
Path 2
Term Annotations click to browse term
  cellular_component 20118
    cellular anatomical entity 19774
      cell projection 2527
        plasma membrane bounded cell projection 2460
          cilium 681
            motile cilium 224
              9+2 motile cilium 162
                sperm flagellum 151
                  outer dense fiber 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.