Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:fibrillar center
go back to main search page
Accession:GO:0001650 term browser browse the term
Definition:A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
Synonyms:exact_synonym: fibrillar centre


show annotations for term's descendants       view all columns           Sort by:
 
fibrillar center term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acaca acetyl-CoA carboxylase alpha JBrowse link 10 71,519,392 71,719,910 RGD:1624291
RGD:1600115
G Aff4 AF4/FMR2 family, member 4 JBrowse link 10 38,692,167 38,773,021 RGD:1624291
RGD:1600115
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:1624291
RGD:1600115
G Akna AT-hook transcription factor JBrowse link 5 79,184,087 79,232,370 RGD:1624291
RGD:1600115
G Ankrd1 ankyrin repeat domain 1 JBrowse link 1 254,726,985 254,745,673 RGD:1624291
RGD:1600115
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 JBrowse link X 23,146,085 23,166,676 RGD:1624291
RGD:1600115
G Arhgap32 Rho GTPase activating protein 32 JBrowse link 8 33,131,874 33,392,198 RGD:1624291
RGD:13792537
G Btbd10 BTB domain containing 10 JBrowse link 1 178,138,562 178,196,551 RGD:1624291
RGD:1600115
G Camk4 calcium/calmodulin-dependent protein kinase IV JBrowse link 18 25,746,878 25,975,962 RGD:1624291
RGD:1600115
G Cc2d1a coiled-coil and C2 domain containing 1A JBrowse link 19 25,246,912 25,261,965 RGD:1624291
RGD:1600115
G Ccdc137 coiled-coil domain containing 137 JBrowse link 10 109,630,099 109,636,480 RGD:1624291
RGD:1600115
G Cd2ap CD2-associated protein JBrowse link 9 20,794,680 20,858,438 RGD:1624291
RGD:1600115
G Cd2bp2 Cd2 (cytoplasmic tail) binding protein 2 JBrowse link 1 198,635,445 198,641,195 RGD:1624291
RGD:1600115
G Cdca7l cell division cycle associated 7 like JBrowse link 6 145,739,570 145,785,607 RGD:1624291
RGD:1600115
G Chchd1 coiled-coil-helix-coiled-coil-helix domain containing 1 JBrowse link 15 4,025,455 4,026,637 RGD:1624291
RGD:1600115
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1624291
RGD:1600115
G Coil coilin JBrowse link 10 76,320,676 76,336,169 RGD:1624291
RGD:1600115
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1624291
RGD:1600115
G Dcaf1 DDB1 and CUL4 associated factor 1 JBrowse link 8 115,538,365 115,615,282 RGD:1624291
RGD:1600115
G Dclre1a DNA cross-link repair 1A JBrowse link 1 277,335,792 277,355,701 RGD:1624291
RGD:1600115
G Ddx11 DEAD/H-box helicase 11 JBrowse link 9 114,113,642 114,133,908 RGD:1624291
RGD:1600115
G Ddx46 DEAD-box helicase 46 JBrowse link 17 9,475,275 9,519,545 RGD:1624291
RGD:1600115
G Deaf1 DEAF1 transcription factor JBrowse link 1 214,283,787 214,317,466 RGD:1624291
RGD:1600115
G Dkc1 dyskerin pseudouridine synthase 1 JBrowse link X 155,844,914 155,862,363 RGD:1624291
G Dsn1 DSN1 component of MIS12 kinetochore complex JBrowse link 3 153,101,020 153,115,326 RGD:1624291
RGD:1600115
G Dusp11 dual specificity phosphatase 11 JBrowse link 4 117,617,640 117,631,674 RGD:1624291
G E2f5 E2F transcription factor 5 JBrowse link 2 88,350,764 88,366,913 RGD:1624291
RGD:1600115
G Eef1d eukaryotic translation elongation factor 1 delta JBrowse link 7 116,928,264 116,942,981 RGD:1624291
G Eif3l eukaryotic translation initiation factor 3, subunit L JBrowse link 7 120,320,547 120,331,596 RGD:1624291
G En2 engrailed homeobox 2 JBrowse link 4 438,668 444,508 RGD:1624291
RGD:1600115
G Esrra estrogen related receptor, alpha JBrowse link 1 222,168,729 222,178,842 RGD:1624291
RGD:1600115
G Exosc8 exosome component 8 JBrowse link 2 143,925,643 143,932,240 RGD:1624291
RGD:1600115
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
RGD:1600115
G Fam111a family with sequence similarity 111, member A JBrowse link 1 229,003,778 229,019,532 RGD:1624291
G Fbl fibrillarin JBrowse link 1 85,103,519 85,112,619 RGD:1624291
RGD:1600115
G Fblim1 filamin binding LIM protein 1 JBrowse link 5 160,122,466 160,158,921 RGD:1624291
RGD:1600115
G Fbll1 fibrillarin-like 1 JBrowse link 10 20,620,957 20,622,600 RGD:1624291
RGD:1600115
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:1624291
G Foxa1 forkhead box A1 JBrowse link 6 78,516,579 78,549,669 RGD:1624291
RGD:1600115
G Foxj2 forkhead box J2 JBrowse link 4 155,653,446 155,679,815 RGD:1624291
RGD:1600115
G Gar1 GAR1 ribonucleoprotein JBrowse link 2 235,250,453 235,258,464 RGD:1624291
RGD:1600115
G Heatr1 HEAT repeat containing 1 JBrowse link 17 66,446,135 66,488,303 RGD:1600115
RGD:1624291
G Herc4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 JBrowse link 20 26,755,948 26,831,267 RGD:1624291
RGD:1600115
G Hoxb5 homeo box B5 JBrowse link 10 84,152,152 84,154,360 RGD:1624291
RGD:1600115
G Imp4 IMP U3 small nucleolar ribonucleoprotein 4 JBrowse link 9 37,769,959 37,775,097 RGD:1624291
RGD:1600115
G Ip6k1 inositol hexakisphosphate kinase 1 JBrowse link 8 116,781,957 116,826,152 RGD:1624291
RGD:1600115
G Ip6k2 inositol hexakisphosphate kinase 2 JBrowse link 8 117,574,136 117,599,849 RGD:1624291
RGD:1600115
G Jazf1 JAZF zinc finger 1 JBrowse link 4 82,834,181 83,141,430 RGD:1624291
RGD:1600115
G Kdm5d lysine demethylase 5D JBrowse link Y 501,058 589,267 RGD:1624291
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
RGD:1600115
G Klf6 Kruppel-like factor 6 JBrowse link 17 67,887,939 67,945,052 RGD:1624291
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component JBrowse link 8 82,380,906 82,405,293 RGD:1624291
RGD:1600115
G Lipa lipase A, lysosomal acid type JBrowse link 1 252,816,536 252,959,348 RGD:1624291
RGD:1600115
G LOC108348069 HEAT repeat-containing protein 1 JBrowse link 17 66,578,885 66,619,465 RGD:1600115
G Malt1 MALT1 paracaspase JBrowse link 18 61,108,712 61,162,446 RGD:1624291
RGD:1600115
G Map3k14 mitogen-activated protein kinase kinase kinase 14 JBrowse link 10 91,303,428 91,353,601 RGD:1624291
RGD:1600115
G Mbd6 methyl-CpG binding domain protein 6 JBrowse link 7 70,571,435 70,580,146 RGD:1624291
RGD:1600115
G Mllt1 MLLT1, super elongation complex subunit JBrowse link 9 10,110,389 10,155,305 RGD:1624291
RGD:1600115
G Mri1 methylthioribose-1-phosphate isomerase 1 JBrowse link 19 25,360,299 25,366,283 RGD:1624291
RGD:1600115
G Mrpl23 mitochondrial ribosomal protein L23 JBrowse link 1 215,701,544 215,709,313 RGD:1624291
G Mtdh metadherin JBrowse link 7 72,771,018 72,830,599 RGD:1624291
RGD:1600115
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:9693699
G Nfib nuclear factor I/B JBrowse link 5 100,436,343 100,647,962 RGD:1624291
RGD:1600115
G Nfic nuclear factor I/C JBrowse link 7 11,151,941 11,179,544 RGD:1624291
RGD:1600115
G Nfkbie NFKB inhibitor epsilon JBrowse link 9 17,828,405 17,835,240 RGD:1624291
RGD:1600115
G Nhej1 nonhomologous end-joining factor 1 JBrowse link 9 82,230,230 82,327,923 RGD:1624291
RGD:1600115
G Nolc1 nucleolar and coiled-body phosphoprotein 1 JBrowse link 1 265,829,055 265,839,819 RGD:1624291
RGD:1600115
G Nono non-POU domain containing, octamer-binding JBrowse link X 71,324,365 71,342,225 RGD:1624291
RGD:1600115
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
G Nop56 NOP56 ribonucleoprotein JBrowse link 3 122,803,726 122,808,564 RGD:1624291
RGD:1600115
G Nop58 NOP58 ribonucleoprotein JBrowse link 9 66,495,881 66,520,521 RGD:1624291
RGD:1600115
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 11 14,658,225 14,742,478 RGD:1624291
RGD:1600115
G Nuak1 NUAK family kinase 1 JBrowse link 7 25,039,336 25,111,118 RGD:1624291
RGD:1600115
G Nufip1 nuclear FMR1 interacting protein 1 JBrowse link 15 58,171,163 58,201,888 RGD:1624291
RGD:1600115
G Orc6 origin recognition complex, subunit 6 JBrowse link 19 27,457,541 27,464,804 RGD:1624291
RGD:1600115
G Pafah1b2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 JBrowse link 8 50,256,969 50,310,043 RGD:1624291
RGD:1600115
G Pak6 p21 (RAC1) activated kinase 6 JBrowse link 3 110,442,175 110,486,317 RGD:1624291
RGD:1600115
G Pax5 paired box 5 JBrowse link 5 60,007,587 60,191,973 RGD:1624291
RGD:1600115
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
RGD:1600115
G Plrg1 pleiotropic regulator 1 JBrowse link 2 182,040,338 182,056,669 RGD:1624291
RGD:1600115
G Polr1e RNA polymerase I subunit E JBrowse link 5 60,572,573 60,588,097 RGD:1624291
RGD:1600115
G Polr1g RNA polymerase I subunit G JBrowse link 1 80,267,725 80,271,001 RGD:1624291
G Polr2f RNA polymerase II subunit F JBrowse link 7 120,380,543 120,392,214 RGD:1624291
G Prmt7 protein arginine methyltransferase 7 JBrowse link 19 38,189,605 38,237,155 RGD:1624291
RGD:1600115
G Pspc1 paraspeckle component 1 JBrowse link 15 36,946,914 37,030,273 RGD:1624291
RGD:1600115
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 JBrowse link 14 7,688,551 7,863,664 RGD:1624291
RGD:1600115
G Rai14 retinoic acid induced 14 JBrowse link 2 60,546,083 60,684,365 RGD:1624291
RGD:1600115
G Rnmt RNA (guanine-7-) methyltransferase JBrowse link 18 64,084,746 64,108,246 RGD:1624291
RGD:1600115
G Rpain RPA interacting protein JBrowse link 10 57,606,287 57,613,834 RGD:1624291
RGD:1600115
G Rpp38 ribonuclease P/MRP subunit p38 JBrowse link 17 78,915,450 78,919,144 RGD:1624291
RGD:13792537
G Rps6ka6 ribosomal protein S6 kinase A6 JBrowse link X 82,641,679 82,743,771 RGD:1624291
RGD:1600115
G Rreb1 ras responsive element binding protein 1 JBrowse link 17 27,539,137 27,718,878 RGD:1624291
RGD:1600115
G Rrs1 ribosome biogenesis regulator 1 homolog JBrowse link 5 9,430,710 9,432,343 RGD:1624291
RGD:1600115
G Rsad2 radical S-adenosyl methionine domain containing 2 JBrowse link 6 45,655,947 45,669,083 RGD:1624291
RGD:1600115
G Samd4a sterile alpha motif domain containing 4A JBrowse link 15 23,666,543 23,879,067 RGD:1624291
RGD:1600115
G Selenbp1 selenium binding protein 1 JBrowse link 2 196,105,592 196,146,474 RGD:1624291
G Sesn1 sestrin 1 JBrowse link 20 46,667,116 46,758,306 RGD:1624291
RGD:1600115
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:1624291
RGD:1600115
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 JBrowse link 19 30,936,703 30,969,454 RGD:1624291
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 20 13,679,955 13,702,821 RGD:1624291
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 JBrowse link 7 144,774,155 144,788,333 RGD:1624291
RGD:1600115
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link 3 137,138,082 137,147,575 RGD:1624291
RGD:1600115
G Sp140 SP140 nuclear body protein JBrowse link 9 92,618,088 92,665,431 RGD:1624291
G Spata2 spermatogenesis associated 2 JBrowse link 3 164,229,211 164,239,483 RGD:1624291
RGD:1600115
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 JBrowse link 10 48,240,291 48,542,171 RGD:1624291
RGD:1600115
G Stn1 STN1 subunit of CST complex JBrowse link 1 267,281,786 267,315,714 RGD:1624291
RGD:1600115
G Stox1 storkhead box 1 JBrowse link 20 32,276,857 32,353,677 RGD:1624291
RGD:1600115
G Sumo1 small ubiquitin-like modifier 1 JBrowse link 9 66,453,428 66,483,614 RGD:2301351
G Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C JBrowse link 19 52,246,061 52,252,642 RGD:1624291
RGD:13792537
G Taf4b TATA-box binding protein associated factor 4b JBrowse link 18 6,206,939 6,338,794 RGD:1624291
RGD:1600115
G Tax1bp3 Tax1 binding protein 3 JBrowse link 10 59,743,356 59,748,063 RGD:1624291
RGD:1600115
G Tcof1 treacle ribosome biogenesis factor 1 JBrowse link 18 56,081,863 56,115,719 RGD:1624291
RGD:1600115
G Terf1 telomeric repeat binding factor 1 JBrowse link 5 2,853,455 2,882,731 RGD:1624291
RGD:1600115
G Thap1 THAP domain containing 1 JBrowse link 16 70,661,360 70,665,831 RGD:1624291
RGD:1600115
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link 7 11,677,340 11,678,443 RGD:1624291
RGD:1600115
G Top1 DNA topoisomerase I JBrowse link 3 156,635,688 156,717,686 RGD:2301351
RGD:1600115
RGD:1624291
G Trerf1 transcriptional regulating factor 1 JBrowse link 9 15,653,230 15,881,695 RGD:1624291
RGD:1600115
G Trim27 tripartite motif-containing 27 JBrowse link 17 45,613,863 45,626,212 RGD:1624291
RGD:1600115
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:1624291
RGD:1600115
G Ubd ubiquitin D JBrowse link 20 1,876,175 1,878,126 RGD:1624291
RGD:1600115
G Ube2i ubiquitin-conjugating enzyme E2I JBrowse link 10 14,618,615 14,639,274 RGD:2301351
G Ube2n ubiquitin-conjugating enzyme E2N JBrowse link 7 36,610,147 36,640,190 RGD:1624291
G Ubtf upstream binding transcription factor JBrowse link 10 90,250,275 90,265,772 RGD:2301351
RGD:1624291
G Urb1 URB1 ribosome biogenesis homolog JBrowse link 11 30,916,740 30,977,423 RGD:1624291
RGD:1600115
G Uso1 USO1 vesicle transport factor JBrowse link 14 17,371,451 17,436,948 RGD:1624291
RGD:1600115
G Utp15 UTP15, small subunit processome component JBrowse link 2 28,351,925 28,370,315 RGD:1624291
RGD:1600115
G Utp4 UTP4 small subunit processome component JBrowse link 19 39,087,995 39,116,124 RGD:1624291
RGD:1600115
G Wdr33 WD repeat domain 33 JBrowse link 18 24,584,832 24,689,681 RGD:1624291
RGD:1600115
G Wdr43 WD repeat domain 43 JBrowse link 6 23,433,532 23,473,179 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19949
    cellular anatomical entity 19598
      fibrillar center 129
Path 2
Term Annotations click to browse term
  cellular_component 19949
    cellular anatomical entity 19598
      organelle 12670
        intracellular organelle 12137
          intracellular membrane-bounded organelle 10066
            nucleus 6843
              nuclear lumen 4007
                nucleolus 922
                  fibrillar center 129
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.