Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:metanephros development
go back to main search page
Accession:GO:0001656 term browser browse the term
Definition:The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.


show annotations for term's descendants           Sort by:
 
metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APH1A aph-1 homolog A, gamma-secretase subunit ISO (MGI:2675249|PMID:12952904) MGI PMID:12952904 MGI:2675249 NCBI chr 1:125,610,649...125,614,261
Ensembl chr 1:129,262,002...129,265,810
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO (MGI:70413|PMID:7840250)
(MGI:81253|PMID:8623928)
MGI PMID:7840250, PMID:8623928 MGI:70413, MGI:81253 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (MGI:2655937|PMID:12631064) MGI PMID:12631064 MGI:2655937 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G BMP7 bone morphogenetic protein 7 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
G CTSH cathepsin H ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr15:57,893,379...57,917,194
Ensembl chr15:76,852,668...76,876,976
JBrowse link
G CTSS cathepsin S ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr 1:126,084,249...126,118,221
Ensembl chr 1:129,733,996...129,768,318
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 ISO (MGI:1335261|PMID:10072433)
(MGI:3588889|PMID:16018995)
MGI PMID:10072433, PMID:16018995 MGI:1335261, MGI:3588889 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G FBN1 fibrillin 1 ISO RGD PMID:9815129 RGD:632672 NCBI chr15:27,358,780...27,593,539
Ensembl chr15:45,682,450...45,918,111
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706
JBrowse link
G FGF8 fibroblast growth factor 8 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916
JBrowse link
G FOXC2 forkhead box C2 ISO (MGI:3619287|PMID:16498405) MGI PMID:16498405 MGI:3619287 NCBI chr16:67,237,476...67,239,545 JBrowse link
G GDF11 growth differentiation factor 11 ISO (MGI:2661314|PMID:12729564) MGI PMID:12729564 MGI:2661314 NCBI chr12:33,154,530...33,168,427
Ensembl chr12:33,879,180...33,893,252
JBrowse link
G GDNF glial cell derived neurotrophic factor ISO (MGI:3714574|PMID:17537792)
(MGI:3043010|PMID:15130495)
(MGI:81285|PMID:8657308)
MGI
UniProt
PMID:8657308, PMID:15130495, PMID:17537792 MGI:3043010, MGI:3714574, MGI:81285 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:3611729|PMID:16396903) MGI PMID:16396903 MGI:3611729 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator ISO (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chr18:14,482,493...14,763,789
Ensembl chr18:18,244,575...18,400,335
JBrowse link
G HOXA11 homeobox A11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103
JBrowse link
G HOXC11 homeobox C11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr12:34,777,790...34,782,104
Ensembl chr12:35,567,093...35,570,396
JBrowse link
G HOXD11 homeobox D11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:3603100|PMID:15569159) MGI PMID:15569159 MGI:3603100 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein ISO (PMID:7655079) UniProtKB PMID:7655079 NCBI chr 1:22,748,714...22,750,582
Ensembl chr 1:23,734,263...23,736,175
JBrowse link
G IRX1 iroquois homeobox 1 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279
JBrowse link
G IRX2 iroquois homeobox 2 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr 5:3,081,361...3,087,014 JBrowse link
G IRX3 iroquois homeobox 3 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr16:34,514,107...34,517,576
Ensembl chr16:53,622,409...53,624,653
JBrowse link
G ITGA8 integrin subunit alpha 8 ISO (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chr10:15,838,320...16,045,206
Ensembl chr10:16,114,999...16,321,360
JBrowse link
G LHX1 LIM homeobox 1 ISO (PMID:7909549) UniProtKB PMID:7909549 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G NF1 neurofibromin 1 ISO (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295
JBrowse link
G NKX3-1 NK3 homeobox 1 ISO (PMID:9142502) UniProtKB PMID:9142502 NCBI chr 8:22,926,145...22,930,396
Ensembl chr 8:19,863,275...19,864,942
JBrowse link
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3613210|PMID:16223478) MGI PMID:16223478 MGI:3613210 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G OSR2 odd-skipped related transciption factor 2 ISO (PMID:11520675) UniProtKB PMID:11520675 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669
JBrowse link
G PAX2 paired box 2 ISO (MGI:77855|PMID:8575306)
(MGI:2445273|PMID:12435636)
MGI PMID:8575306, PMID:12435636 MGI:2445273, MGI:77855 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (PMID:1723950)
(MGI:2445273|PMID:12435636)
UniProtKB
MGI
PMID:1723950, PMID:12435636 MGI:2445273 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PDS5A PDS5 cohesin associated factor A ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chr 4:34,149,622...34,303,065
Ensembl chr 4:40,002,869...40,156,698
JBrowse link
G RDH10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chr 8:69,833,320...69,863,536
Ensembl chr 8:71,481,089...71,510,689
JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chr 3:76,013,780...77,764,156
Ensembl chr 3:79,030,223...79,632,309
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SIX2 SIX homeobox 2 ISO (MGI:3691408|PMID:17036046) MGI PMID:17036046 MGI:3691408 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
G SLC5A1 solute carrier family 5 member 1 ISO (MGI:1913165|PMID:10997927) MGI PMID:10997927 MGI:1913165 NCBI chr22:13,070,853...13,140,948
Ensembl chr22:30,924,169...30,992,046
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
G SOX17 SRY-box transcription factor 17 ISO (PMID:20960469) BHF-UCL PMID:20960469 NCBI chr 8:50,883,088...50,885,542
Ensembl chr 8:48,257,287...48,259,808
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 ISO (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chr 4:115,570,788...115,578,824
Ensembl chr 4:126,718,811...126,719,770
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 ISO (PMID:18776146) UniProtKB PMID:18776146 NCBI chr19:28,195,740...28,270,265
Ensembl chr19:36,946,685...37,021,531
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:69785|PMID:7990960) MGI PMID:7990960 MGI:69785 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
G WT1 WT1 transcription factor ISO (MGI:62488|PMID:8395349)
(MGI:1335967|PMID:10322633)
(MGI:2149238|PMID:11509181)
UniProt
MGI
PMID:8395349, PMID:10322633, PMID:11509181 MGI:1335967, MGI:2149238, MGI:62488 NCBI chr11:32,349,807...32,398,494 JBrowse link
canonical Wnt signaling pathway involved in metanephric kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 ISO (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
cell differentiation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPC3 glypican 3 ISO (MGI:2156986|PMID:10402475) MGI PMID:10402475 MGI:2156986 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441
JBrowse link
G PTCH1 patched 1 ISO (MGI:4367286|PMID:19809516) MGI PMID:19809516 MGI:4367286 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SALL1 spalt like transcription factor 1 ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor ISO (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (PMID:10706139) UniProtKB PMID:10706139 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G GDNF glial cell derived neurotrophic factor ISO (PMID:10322633)
PMID:17522159
UniProtKB
UniProt
PMID:10322633, PMID:17522159 RGD:8656002 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist ISO (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chr15:11,213,870...11,230,619 JBrowse link
G PAX2 paired box 2 ISO (PMID:10322633) UniProtKB PMID:10322633 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (PMID:8861958) UniProtKB PMID:8861958 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (PMID:11511981)
(MGI:2149437|PMID:11688560)
UniProtKB
UniProt
PMID:11511981, PMID:11688560 MGI:2149437 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
G SIX2 SIX homeobox 2 ISO (PMID:10322633) UniProtKB PMID:10322633 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
metanephric ascending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100972297 polycystin-1 ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr16:604,927...1,697,831 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G POU3F3 POU class 3 homeobox 3 ISO (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G UMOD uromodulin ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
metanephric capsule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 5:41,867,118...41,870,497 JBrowse link
metanephric capsule specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 5:41,867,118...41,870,497 JBrowse link
metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO (MGI:3628967|PMID:16449351) MGI PMID:16449351 MGI:3628967 NCBI chr 7:126,400,861...126,417,756
Ensembl chr 7:138,912,953...138,924,095
JBrowse link
G AQP2 aquaporin 2 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr12:38,796,300...38,804,559
Ensembl chr12:39,690,289...39,698,397
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (MGI:3710018|PMID:17442697) UniProt PMID:17442697 MGI:3710018 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G CALB1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 ISO (MGI:3722974|PMID:17765678) MGI PMID:17765678 MGI:3722974 NCBI chr10:74,311,249...74,447,312
Ensembl chr10:76,972,573...77,110,115
JBrowse link
G LOC100972297 polycystin-1 ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr16:604,927...1,697,831 JBrowse link
G PAX2 paired box 2 ISO (MGI:1889171|PMID:10980123) UniProt PMID:10980123 MGI:1889171 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PTCH1 patched 1 ISO (PMID:17850284) UniProt PMID:17850284 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (PMID:17850284) UniProt PMID:17850284 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 Ensembl chr22:44,988,647...45,044,841 JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G WT1 WT1 transcription factor ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr11:32,349,807...32,398,494 JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
JBrowse link
metanephric cortex development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 ISO (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr2A:96,967,943...96,972,378 JBrowse link
metanephric descending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:31,524,933...31,538,602 JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
JBrowse link
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G UMOD uromodulin ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100972297 polycystin-1 ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr16:604,927...1,697,831 JBrowse link
metanephric epithelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G PAX2 paired box 2 ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 Ensembl chr22:44,988,647...45,044,841 JBrowse link
G WT1 WT1 transcription factor ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chr11:32,349,807...32,398,494 JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 ISO (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489) MGI PMID:7670489, PMID:16886065 MGI:3664526, MGI:75217 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRA platelet derived growth factor receptor alpha ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G TCF21 transcription factor 21 ISO (MGI:2651771|PMID:12619136) UniProt PMID:12619136 MGI:2651771 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO (PMID:9693135) UniProtKB PMID:9693135 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD34 CD34 molecule ISO (PMID:1868864) UniProtKB PMID:1868864 NCBI chr 1:183,459,028...183,489,583
Ensembl chr 1:188,272,551...188,297,384
JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta ISO (PMID:9693135) UniProtKB PMID:9693135 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 ISO (MGI:3664526|PMID:16886065) MGI PMID:16886065 MGI:3664526 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin ISO (PMID:11786407) UniProtKB PMID:11786407 NCBI chr 1:155,038,753...155,064,332 JBrowse link
metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G LHX1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
metanephric glomerulus morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:31,524,933...31,538,602 JBrowse link
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 ISO (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 Ensembl chr22:44,988,647...45,044,841 JBrowse link
metanephric macula densa development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 ISO (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr2A:96,967,943...96,972,378 JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G PAX2 paired box 2 ISO (MGI:3663200|PMID:16368682) UniProt PMID:16368682 MGI:3663200 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G TCF21 transcription factor 21 ISO (MGI:2651771|PMID:12619136) UniProt PMID:12619136 MGI:2651771 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 ISO (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
metanephric mesenchyme development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G PAX2 paired box 2 ISO (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G SIX1 SIX homeobox 1 ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SIX4 SIX homeobox 4 ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G WT1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr11:32,349,807...32,398,494 JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 ISO (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G SMAD4 SMAD family member 4 ISO (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
JBrowse link
metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G TFAP2A transcription factor AP-2 alpha ISO (PMID:7555706) UniProtKB PMID:7555706 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TFAP2B transcription factor AP-2 beta ISO (PMID:7555706) UniProtKB PMID:7555706 NCBI chr 6:50,376,157...50,406,740
Ensembl chr 6:51,635,899...51,664,691
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:3784679|PMID:18346943) MGI PMID:18346943 MGI:3784679 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 ISO (MGI:4398804|PMID:19830824) MGI PMID:19830824 MGI:4398804 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G SOX8 SRY-box transcription factor 8 ISO (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090
G SOX9 SRY-box transcription factor 9 ISO (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090 NCBI chr17:66,028,737...66,034,122 JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 ISO (PMID:15465493) UniProtKB PMID:15465493 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HES5 hes family bHLH transcription factor 5 ISO (PMID:15465493) UniProtKB PMID:15465493 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
JBrowse link
G FOXJ1 forkhead box J1 ISO (PMID:9530170) BHF-UCL PMID:9530170 NCBI chr17:70,084,920...70,089,865
Ensembl chr17:75,638,634...75,641,666
JBrowse link
G LHX1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:7733320 RGD:2326090 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:31,524,933...31,538,602 JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:31,524,933...31,538,602 JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100972297 polycystin-1 ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr16:604,927...1,697,831 JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 ISO (PMID:7909549) UniProtKB PMID:7909549 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 ISO PMID:9496787
(PMID:7909549)
UniProt
UniProtKB
PMID:7909549, PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G WT1 WT1 transcription factor ISO (PMID:18618131)
(MGI:1333093|PMID:10101119)
(PMID:10101119)
UniProtKB
UniProt
PMID:10101119, PMID:18618131 MGI:1333093 NCBI chr11:32,349,807...32,398,494 JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 ISO (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G UMOD uromodulin ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
metanephric tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTSS1 MTSS I-BAR domain containing 1 ISO (MGI:5317250|PMID:21406566) MGI PMID:21406566 MGI:5317250 NCBI chr 8:121,235,545...121,413,037
Ensembl chr 8:123,987,577...124,032,339
JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (PMID:8787755) UniProtKB PMID:8787755 NCBI chr17:66,028,737...66,034,122 JBrowse link
G WNT9B Wnt family member 9B ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr17:10,616,957...10,651,954 JBrowse link
metanephric tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 ISO (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
G WNT9B Wnt family member 9B ISO (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chr17:10,616,957...10,651,954 JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR2 C-X-C motif chemokine receptor 2 ISO RGD PMID:17634442 RGD:7257700 NCBI chr2B:105,387,198...105,400,533
Ensembl chr2B:223,997,066...223,998,148
JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (MGI:3688470|PMID:11062007) MGI PMID:11062007 MGI:3688470 NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706
JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 ISO (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr 4:45,650,346...46,138,222
Ensembl chr 4:51,500,396...51,981,476
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 Ensembl chr22:44,988,647...45,044,841 JBrowse link
negative regulation of apoptotic process involved in metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B ISO (MGI:4430439|PMID:20040500) MGI PMID:20040500 MGI:4430439 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G WT1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) MGI PMID:8395349 MGI:62488 NCBI chr11:32,349,807...32,398,494 JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 ISO PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:61,537,949...61,543,545
Ensembl chr  X:71,621,785...71,625,702
JBrowse link
G CTNNB1 catenin beta 1 ISO (MGI:3714576|PMID:17537789) MGI PMID:17537789 MGI:3714576 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (PMID:12141440) UniProtKB PMID:12141440 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor ISO (MGI:1332959|PMID:10077614) UniProt PMID:10077614 MGI:1332959 NCBI chr11:32,349,807...32,398,494 JBrowse link
negative regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO (MGI:4943654|PMID:19460854) UniProt PMID:19460854 MGI:4943654 NCBI chr 3:183,876,051...183,889,723
Ensembl chr 3:192,341,320...192,354,885
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (PMID:12141440) UniProtKB PMID:12141440 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 ISO PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor ISO (MGI:81286|PMID:8657306) UniProt PMID:8657306 MGI:81286 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G LIF LIF interleukin 6 family cytokine ISO (PMID:20624457) BHF-UCL PMID:20624457 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608
JBrowse link
G PAX2 paired box 2 ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO (MGI:3795840|PMID:18431508) UniProt PMID:18431508 MGI:3795840 NCBI chr 3:183,876,051...183,889,723
Ensembl chr 3:192,341,320...192,354,885
JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G PAX2 paired box 2 ISO (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G RET ret proto-oncogene ISO (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
JBrowse link
positive regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO PMID:19460854
(PMID:10734101)
UniProt
UniProtKB
PMID:10734101, PMID:19460854 RGD:8554838 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A ISO (PMID:19019919) UniProtKB PMID:19019919 NCBI chr 7:648,722...672,023 JBrowse link
G PDGFB platelet derived growth factor subunit B ISO (PMID:19019919) UniProtKB PMID:19019919 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO (MGI:5284758|PMID:19019919) UniProt PMID:19019919 MGI:5284758 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr11:32,349,807...32,398,494 JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX1 iroquois homeobox 1 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279
JBrowse link
G IRX2 iroquois homeobox 2 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr 5:3,081,361...3,087,014 JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT9B Wnt family member 9B ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr17:10,616,957...10,651,954 JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT4 FAT atypical cadherin 4 ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407
JBrowse link
G LIF LIF interleukin 6 family cytokine ISO (PMID:20624457) BHF-UCL PMID:20624457 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608
JBrowse link
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G WWTR1 WW domain containing transcription regulator 1 ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 3:146,536,564...146,678,847
Ensembl chr 3:154,114,034...154,254,490
JBrowse link
G YAP1 Yes1 associated transcriptional regulator ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301
JBrowse link
regulation of metanephros size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G PAX2 paired box 2 ISO (PMID:17513325)
(MGI:3833510|PMID:17881463)
UniProtKB
UniProt
PMID:17513325, PMID:17881463 MGI:3833510 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN1 formin 1 ISO (MGI:65439|PMID:7517224) MGI PMID:7517224 MGI:65439 NCBI chr15:11,271,794...11,698,539
Ensembl chr15:30,114,113...30,495,909
JBrowse link
G KIF26B kinesin family member 26B ISO (MGI:4454194|PMID:20439720) MGI PMID:20439720 MGI:4454194 NCBI chr 1:220,756,171...221,321,969
Ensembl chr 1:226,343,821...226,681,669
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:3665498|PMID:16839447)
(MGI:2149437|PMID:11688560)
MGI
UniProt
PMID:11688560, PMID:16839447 MGI:2149437, MGI:3665498 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    developmental process 5839
      anatomical structure development 5452
        animal organ development 3618
          kidney development 355
            metanephros development 98
              cell differentiation involved in metanephros development + 24
              cell migration involved in metanephros development + 4
              cell proliferation involved in metanephros development + 10
              cell-cell signaling involved in metanephros development + 2
              mesenchymal cell apoptotic process involved in metanephros development + 4
              metanephric capsule development + 1
              metanephric collecting duct development + 11
              metanephric cortex development 1
              metanephric epithelium development + 29
              metanephric juxtaglomerular apparatus development + 1
              metanephric mesenchyme development + 12
              metanephric nephron development + 42
              metanephric pyramids development 0
              metanephric smooth muscle tissue development 2
              metanephros morphogenesis + 31
              negative regulation of metanephros development + 1
              pattern specification involved in metanephros development + 4
              positive regulation of metanephros development + 3
              regulation of metanephric glomerulus development + 3
              regulation of metanephros development + 5
              regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
Path 2
Term Annotations click to browse term
  biological_process 12566
    developmental process 5839
      anatomical structure development 5452
        multicellular organism development 4984
          system development 4688
            urogenital system development 415
              renal system development 369
                kidney development 355
                  metanephros development 98
                    cell differentiation involved in metanephros development + 24
                    cell migration involved in metanephros development + 4
                    cell proliferation involved in metanephros development + 10
                    cell-cell signaling involved in metanephros development + 2
                    mesenchymal cell apoptotic process involved in metanephros development + 4
                    metanephric capsule development + 1
                    metanephric collecting duct development + 11
                    metanephric cortex development 1
                    metanephric epithelium development + 29
                    metanephric juxtaglomerular apparatus development + 1
                    metanephric mesenchyme development + 12
                    metanephric nephron development + 42
                    metanephric pyramids development 0
                    metanephric smooth muscle tissue development 2
                    metanephros morphogenesis + 31
                    negative regulation of metanephros development + 1
                    pattern specification involved in metanephros development + 4
                    positive regulation of metanephros development + 3
                    regulation of metanephric glomerulus development + 3
                    regulation of metanephros development + 5
                    regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.