Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:metanephros development
go back to main search page
Accession:GO:0001656 term browser browse the term
Definition:The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.


GViewer not supported for chinchilla.
show annotations for term's descendants           Sort by:
 
metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aph1a aph-1 homolog A, gamma-secretase subunit ISO (MGI:2675249|PMID:12952904) MGI PMID:12952904 MGI:2675249 NCBI chrNW_004955413:506,297...509,787
Ensembl chrNW_004955413:506,297...509,787
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:81253|PMID:8623928)
(MGI:70413|PMID:7840250)
MGI PMID:7840250, PMID:8623928 MGI:70413, MGI:81253 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:2655937|PMID:12631064) MGI PMID:12631064 MGI:2655937 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Ctsh cathepsin H ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chrNW_004955533:39,237...54,881
Ensembl chrNW_004955533:39,284...54,837
JBrowse link
G Ctss cathepsin S ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chrNW_004955413:99,279...124,793
Ensembl chrNW_004955413:99,159...124,042
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO (MGI:3588889|PMID:16018995)
(MGI:1335261|PMID:10072433)
MGI PMID:10072433, PMID:16018995 MGI:1335261, MGI:3588889 NCBI chrNW_004955444:8,336,071...8,655,041
Ensembl chrNW_004955444:8,495,530...8,655,100
JBrowse link
G Fbn1 fibrillin 1 ISO RGD PMID:9815129 RGD:632672 NCBI chrNW_004955409:5,281,603...5,502,547
Ensembl chrNW_004955409:5,281,603...5,504,761
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chrNW_004955446:18,163,117...18,244,840
Ensembl chrNW_004955446:18,163,117...18,245,199
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770
JBrowse link
G Gdf11 growth differentiation factor 11 ISO (MGI:2661314|PMID:12729564) MGI PMID:12729564 MGI:2661314 NCBI chrNW_004955458:3,388,402...3,398,040
Ensembl chrNW_004955458:3,388,402...3,398,040
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO (MGI:3714574|PMID:17537792)
(MGI:3043010|PMID:15130495)
(MGI:81285|PMID:8657308)
MGI
UniProt
PMID:8657308, PMID:15130495, PMID:17537792 MGI:3043010, MGI:3714574, MGI:81285 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:3611729|PMID:16396903) MGI PMID:16396903 MGI:3611729 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator ISO (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chrNW_004955402:9,865,934...10,204,990
Ensembl chrNW_004955402:10,104,225...10,201,479
JBrowse link
G Hoxa11 homeobox A11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
JBrowse link
G Hoxc11 homeobox C11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chrNW_004955458:1,231,625...1,234,785
Ensembl chrNW_004955458:1,231,445...1,234,798
JBrowse link
G Hoxd11 homeobox D11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chrNW_004955403:20,541,870...20,556,574 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:3603100|PMID:15569159) MGI PMID:15569159 MGI:3603100 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO (PMID:7655079) UniProtKB PMID:7655079 NCBI chrNW_004955452:3,537,352...3,538,921
Ensembl chrNW_004955452:3,537,021...3,560,954
JBrowse link
G Irx1 iroquois homeobox 1 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chrNW_004955504:2,072,540...2,099,781 JBrowse link
G Irx2 iroquois homeobox 2 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996
JBrowse link
G Irx3 iroquois homeobox 3 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369
JBrowse link
G Itga8 integrin subunit alpha 8 ISO (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chrNW_004955429:11,932,764...12,120,757
Ensembl chrNW_004955429:11,932,570...12,120,821
JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:7909549) UniProtKB PMID:7909549 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Nf1 neurofibromin 1 ISO (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO (PMID:9142502) UniProtKB PMID:9142502 NCBI chrNW_004955403:46,807,846...46,809,924
Ensembl chrNW_004955403:46,806,178...46,836,310
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3613210|PMID:16223478) MGI PMID:16223478 MGI:3613210 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO (PMID:11520675) UniProtKB PMID:11520675 NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160
JBrowse link
G Pax2 paired box 2 ISO (MGI:2445273|PMID:12435636)
(MGI:77855|PMID:8575306)
MGI PMID:8575306, PMID:12435636 MGI:2445273, MGI:77855 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (PMID:1723950)
(MGI:2445273|PMID:12435636)
UniProtKB
MGI
PMID:1723950, PMID:12435636 MGI:2445273 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Pds5a PDS5 cohesin associated factor A ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chrNW_004955443:7,475,434...7,603,548
Ensembl chrNW_004955443:7,475,385...7,604,714
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chrNW_004955444:6,878,722...6,909,421
Ensembl chrNW_004955444:6,878,722...6,909,421
JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Six2 SIX homeobox 2 ISO (MGI:3691408|PMID:17036046) MGI PMID:17036046 MGI:3691408 NCBI chrNW_004955441:12,029,530...12,033,214
Ensembl chrNW_004955441:12,029,480...12,033,214
JBrowse link
G Slc5a1 solute carrier family 5 member 1 ISO (MGI:1913165|PMID:10997927) MGI PMID:10997927 MGI:1913165 NCBI chrNW_004955455:6,158,773...6,236,950
Ensembl chrNW_004955455:6,158,959...6,236,189
JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (PMID:20960469) BHF-UCL PMID:20960469 NCBI chrNW_004955454:13,689,403...13,690,019 JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chrNW_004955428:17,451,703...17,455,695
Ensembl chrNW_004955428:17,451,703...17,455,695
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 ISO (PMID:18776146) UniProtKB PMID:18776146 NCBI chrNW_004955468:6,448,167...6,669,706
Ensembl chrNW_004955468:6,448,167...6,519,391
JBrowse link
G Wnt4 Wnt family member 4 ISO (MGI:69785|PMID:7990960) MGI PMID:7990960 MGI:69785 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:62488|PMID:8395349)
(MGI:1335967|PMID:10322633)
(MGI:2149238|PMID:11509181)
UniProt
MGI
PMID:8395349, PMID:10322633, PMID:11509181 MGI:1335967, MGI:2149238, MGI:62488 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
canonical Wnt signaling pathway involved in metanephric kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
cell differentiation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 ISO (MGI:2156986|PMID:10402475) MGI PMID:10402475 MGI:2156986 NCBI chrNW_004955473:969,627...1,431,706
Ensembl chrNW_004955473:969,800...1,431,483
JBrowse link
G Ptch1 patched 1 ISO (MGI:4367286|PMID:19809516) MGI PMID:19809516 MGI:4367286 NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt like transcription factor 1 ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor ISO (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:10706139) UniProtKB PMID:10706139 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO (PMID:10322633)
PMID:17522159
UniProtKB
UniProt
PMID:10322633, PMID:17522159 RGD:8656002 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
JBrowse link
G Pax2 paired box 2 ISO (PMID:10322633) UniProtKB PMID:10322633 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (PMID:8861958) UniProtKB PMID:8861958 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Sall1 spalt like transcription factor 1 ISO (PMID:11511981)
(MGI:2149437|PMID:11688560)
UniProtKB
UniProt
PMID:11511981, PMID:11688560 MGI:2149437 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link
G Six2 SIX homeobox 2 ISO (PMID:10322633) UniProtKB PMID:10322633 NCBI chrNW_004955441:12,029,530...12,033,214
Ensembl chrNW_004955441:12,029,480...12,033,214
JBrowse link
metanephric ascending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Umod uromodulin ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955442:3,986,936...4,001,155
Ensembl chrNW_004955442:3,985,308...3,999,598
JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
metanephric capsule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
metanephric capsule specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955547:547,770...555,764
Ensembl chrNW_004955547:547,064...555,958
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:3710018|PMID:17442697) UniProt PMID:17442697 MGI:3710018 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Calb1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 ISO (MGI:3722974|PMID:17765678) MGI PMID:17765678 MGI:3722974 NCBI chrNW_004955437:14,510,488...14,628,768
Ensembl chrNW_004955437:14,510,488...14,628,768
JBrowse link
G Pax2 paired box 2 ISO (MGI:1889171|PMID:10980123) UniProt PMID:10980123 MGI:1889171 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
G Ptch1 patched 1 ISO (PMID:17850284) UniProt PMID:17850284 NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (PMID:17850284) UniProt PMID:17850284 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
metanephric cortex development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
metanephric descending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955410:32,066,196...32,078,661 JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Umod uromodulin ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955442:3,986,936...4,001,155
Ensembl chrNW_004955442:3,985,308...3,999,598
JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
metanephric epithelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Pax2 paired box 2 ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 ISO (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489) MGI PMID:7670489, PMID:16886065 MGI:3664526, MGI:75217 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfra platelet derived growth factor receptor alpha ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chrNW_004955447:16,570,652...16,613,410
Ensembl chrNW_004955447:16,569,909...16,612,373
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
G Tcf21 transcription factor 21 ISO (MGI:2651771|PMID:12619136) UniProt PMID:12619136 MGI:2651771 NCBI chrNW_004955439:2,617,562...2,620,613
Ensembl chrNW_004955439:2,617,492...2,620,644
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B ISO (PMID:9693135) UniProtKB PMID:9693135 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule ISO (PMID:1868864) UniProtKB PMID:1868864 NCBI chrNW_004955406:43,116,688...43,130,405
Ensembl chrNW_004955406:43,117,816...43,130,463
JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta ISO (PMID:9693135) UniProtKB PMID:9693135 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 ISO (MGI:3664526|PMID:16886065) MGI PMID:16886065 MGI:3664526 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin ISO (PMID:11786407) UniProtKB PMID:11786407 NCBI chrNW_004955406:18,862,054...18,885,214
Ensembl chrNW_004955406:18,863,446...18,885,279
JBrowse link
metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
G Lhx1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
metanephric glomerulus morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955410:32,066,196...32,078,661 JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt7b Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Pax2 paired box 2 ISO (MGI:3663200|PMID:16368682) UniProt PMID:16368682 MGI:3663200 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Tcf21 transcription factor 21 ISO (MGI:2651771|PMID:12619136) UniProt PMID:12619136 MGI:2651771 NCBI chrNW_004955439:2,617,562...2,620,613
Ensembl chrNW_004955439:2,617,492...2,620,644
JBrowse link
metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
metanephric mesenchyme development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Pax2 paired box 2 ISO (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chrNW_004955466:8,902,728...8,915,685
Ensembl chrNW_004955466:8,902,517...8,915,723
JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Smad4 SMAD family member 4 ISO (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (PMID:7555706) UniProtKB PMID:7555706 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Tfap2b transcription factor AP-2 beta ISO (PMID:7555706) UniProtKB PMID:7555706 NCBI chrNW_004955411:7,143,095...7,171,285
Ensembl chrNW_004955411:7,142,607...7,170,467
JBrowse link
G Wnt4 Wnt family member 4 ISO (MGI:3784679|PMID:18346943) MGI PMID:18346943 MGI:3784679 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 ISO (MGI:4398804|PMID:19830824) MGI PMID:19830824 MGI:4398804 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 ISO (PMID:15465493) UniProtKB PMID:15465493 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO (PMID:15465493) UniProtKB PMID:15465493 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
G Foxj1 forkhead box J1 ISO (PMID:9530170) BHF-UCL PMID:9530170 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302
JBrowse link
G Lhx1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:7733320 RGD:2326090 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955410:32,066,196...32,078,661 JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955410:32,066,196...32,078,661 JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO (PMID:7909549) UniProtKB PMID:7909549 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO PMID:9496787
(PMID:7909549)
UniProt
UniProtKB
PMID:7909549, PMID:9496787 RGD:8553921 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:18618131)
(MGI:1333093|PMID:10101119)
(PMID:10101119)
UniProtKB
UniProt
PMID:10101119, PMID:18618131 MGI:1333093 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umod uromodulin ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chrNW_004955442:3,986,936...4,001,155
Ensembl chrNW_004955442:3,985,308...3,999,598
JBrowse link
metanephric tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtss1 MTSS I-BAR domain containing 1 ISO (MGI:5317250|PMID:21406566) MGI PMID:21406566 MGI:5317250 NCBI chrNW_004955540:3,204,357...3,346,026
Ensembl chrNW_004955540:3,204,367...3,346,026
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:8787755) UniProtKB PMID:8787755 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Wnt9b Wnt family member 9B ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chrNW_004955478:10,816,405...10,841,416
Ensembl chrNW_004955478:10,816,405...10,841,416
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 ISO (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
G Wnt9b Wnt family member 9B ISO (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chrNW_004955478:10,816,405...10,841,416
Ensembl chrNW_004955478:10,816,405...10,841,416
JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (MGI:3688470|PMID:11062007) MGI PMID:11062007 MGI:3688470 NCBI chrNW_004955446:18,163,117...18,244,840
Ensembl chrNW_004955446:18,163,117...18,245,199
JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 ISO (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chrNW_004955433:2,547,228...2,957,294
Ensembl chrNW_004955433:2,547,323...2,957,495
JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
negative regulation of apoptotic process involved in metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO (MGI:4430439|PMID:20040500) MGI PMID:20040500 MGI:4430439 NCBI chrNW_004955451:320,283...371,420
Ensembl chrNW_004955451:320,283...371,420
JBrowse link
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) MGI PMID:8395349 MGI:62488 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 ISO PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chrNW_004955475:11,722,514...11,725,067 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:3714576|PMID:17537789) MGI PMID:17537789 MGI:3714576 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:12141440) UniProtKB PMID:12141440 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor ISO (MGI:1332959|PMID:10077614) UniProt PMID:10077614 MGI:1332959 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
negative regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO (MGI:4943654|PMID:19460854) UniProt PMID:19460854 MGI:4943654 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:12141440) UniProtKB PMID:12141440 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 ISO PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor ISO (MGI:81286|PMID:8657306) UniProt PMID:8657306 MGI:81286 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO (PMID:20624457) BHF-UCL PMID:20624457 NCBI chrNW_004955455:4,489,515...4,505,439
Ensembl chrNW_004955455:4,489,421...4,497,940
JBrowse link
G Pax2 paired box 2 ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO (MGI:3795840|PMID:18431508) UniProt PMID:18431508 MGI:3795840 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor type 2 ISO (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Pax2 paired box 2 ISO (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Ret ret proto-oncogene ISO (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chrNW_004955546:1,221,995...1,252,147
Ensembl chrNW_004955546:1,221,995...1,253,946
JBrowse link
positive regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B ISO (PMID:10734101)
PMID:19460854
UniProtKB
UniProt
PMID:10734101, PMID:19460854 RGD:8554838 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A ISO (PMID:19019919) UniProtKB PMID:19019919 NCBI chrNW_004955460:8,328,400...8,346,755
Ensembl chrNW_004955460:8,326,891...8,346,550
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (PMID:19019919) UniProtKB PMID:19019919 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO (MGI:5284758|PMID:19019919) UniProt PMID:19019919 MGI:5284758 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx1 iroquois homeobox 1 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chrNW_004955504:2,072,540...2,099,781 JBrowse link
G Irx2 iroquois homeobox 2 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996
JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chrNW_004955478:10,816,405...10,841,416
Ensembl chrNW_004955478:10,816,405...10,841,416
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chrNW_004955428:15,621,333...15,812,167
Ensembl chrNW_004955428:15,622,498...15,810,896
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO (PMID:20624457) BHF-UCL PMID:20624457 NCBI chrNW_004955455:4,489,515...4,505,439
Ensembl chrNW_004955455:4,489,421...4,497,940
JBrowse link
G Pax2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chrNW_004955448:745,419...868,313
Ensembl chrNW_004955448:745,419...868,602
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408
JBrowse link
regulation of metanephros size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor type 2 ISO (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Pax2 paired box 2 ISO (PMID:17513325)
(MGI:3833510|PMID:17881463)
UniProtKB
UniProt
PMID:17513325, PMID:17881463 MGI:3833510 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 ISO (MGI:65439|PMID:7517224) MGI PMID:7517224 MGI:65439 NCBI chrNW_004955416:1,365,797...1,774,025
Ensembl chrNW_004955416:1,365,765...1,774,027
JBrowse link
G Kif26b kinesin family member 26B ISO (MGI:4454194|PMID:20439720) MGI PMID:20439720 MGI:4454194 NCBI chrNW_004955406:8,289,774...8,738,131
Ensembl chrNW_004955406:8,290,046...8,731,226
JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:3665498|PMID:16839447)
(MGI:2149437|PMID:11688560)
MGI
UniProt
PMID:11688560, PMID:16839447 MGI:2149437, MGI:3665498 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    developmental process 5616
      anatomical structure development 5254
        animal organ development 3490
          kidney development 340
            metanephros development 94
              cell differentiation involved in metanephros development + 23
              cell migration involved in metanephros development + 4
              cell proliferation involved in metanephros development + 10
              cell-cell signaling involved in metanephros development + 2
              mesenchymal cell apoptotic process involved in metanephros development + 4
              metanephric capsule development + 1
              metanephric collecting duct development + 10
              metanephric cortex development 1
              metanephric epithelium development + 27
              metanephric juxtaglomerular apparatus development + 0
              metanephric mesenchyme development + 12
              metanephric nephron development + 42
              metanephric pyramids development 0
              metanephric smooth muscle tissue development 2
              metanephros morphogenesis + 31
              negative regulation of metanephros development + 1
              pattern specification involved in metanephros development + 4
              positive regulation of metanephros development + 3
              regulation of metanephric glomerulus development + 3
              regulation of metanephros development + 5
              regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
Path 2
Term Annotations click to browse term
  biological_process 11892
    developmental process 5616
      anatomical structure development 5254
        multicellular organism development 4812
          system development 4532
            urogenital system development 401
              renal system development 354
                kidney development 340
                  metanephros development 94
                    cell differentiation involved in metanephros development + 23
                    cell migration involved in metanephros development + 4
                    cell proliferation involved in metanephros development + 10
                    cell-cell signaling involved in metanephros development + 2
                    mesenchymal cell apoptotic process involved in metanephros development + 4
                    metanephric capsule development + 1
                    metanephric collecting duct development + 10
                    metanephric cortex development 1
                    metanephric epithelium development + 27
                    metanephric juxtaglomerular apparatus development + 0
                    metanephric mesenchyme development + 12
                    metanephric nephron development + 42
                    metanephric pyramids development 0
                    metanephric smooth muscle tissue development 2
                    metanephros morphogenesis + 31
                    negative regulation of metanephros development + 1
                    pattern specification involved in metanephros development + 4
                    positive regulation of metanephros development + 3
                    regulation of metanephric glomerulus development + 3
                    regulation of metanephros development + 5
                    regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.