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ONTOLOGY REPORT - ANNOTATIONS


Term:metanephros development
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Accession:GO:0001656 term browser browse the term
Definition:The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.


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metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aph1a aph1 homolog A, gamma secretase subunit IMP (MGI:2675249|PMID:12952904) MGI PMID:12952904 MGI:2675249 NCBI chr 3:95,893,921...95,898,592
Ensembl chr 3:95,893,969...95,898,288
JBrowse link
G Aph1c aph1 homolog C, gamma secretase subunit IMP (MGI:2675249|PMID:12952904) MGI PMID:12952904 MGI:2675249 NCBI chr 9:66,814,991...66,834,706
Ensembl chr 9:66,814,994...66,834,726
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IMP (MGI:70413|PMID:7840250)
(MGI:81253|PMID:8623928)
MGI PMID:7840250, PMID:8623928 MGI:70413, MGI:81253 NCBI chr 1:106,538,176...106,714,290
Ensembl chr 1:106,538,178...106,714,274
JBrowse link
G Bmp4 bone morphogenetic protein 4 IDA
IMP
(MGI:2655937|PMID:12631064) MGI PMID:12631064 MGI:2655937 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr 2:172,868,012...172,940,321
Ensembl chr 2:172,868,012...172,940,321
JBrowse link
G Ctsh cathepsin H ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr 9:90,054,267...90,076,095
Ensembl chr 9:90,054,152...90,076,089
JBrowse link
G Ctss cathepsin S ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr 3:95,526,786...95,556,405
Ensembl chr 3:95,526,786...95,556,403
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IMP (MGI:1335261|PMID:10072433)
(MGI:3588889|PMID:16018995)
MGI PMID:10072433, PMID:16018995 MGI:1335261, MGI:3588889 NCBI chr 1:14,168,953...14,311,035
Ensembl chr 1:14,168,954...14,310,235
JBrowse link
G Fbn1 fibrillin 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 2:125,300,594...125,506,485
Ensembl chr 2:125,300,594...125,507,993
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr13:118,714,699...118,792,573
Ensembl chr13:118,669,791...118,792,115
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr19:45,736,491...45,742,941
Ensembl chr19:45,736,798...45,742,915
JBrowse link
G Foxc2 forkhead box C2 IMP (MGI:3619287|PMID:16498405) MGI PMID:16498405 MGI:3619287 NCBI chr 8:121,116,171...121,118,895
Ensembl chr 8:121,116,171...121,118,895
JBrowse link
G Gdf11 growth differentiation factor 11 IDA (MGI:2661314|PMID:12729564) MGI PMID:12729564 MGI:2661314 NCBI chr10:128,880,524...128,891,718
Ensembl chr10:128,882,295...128,891,718
JBrowse link
G Gdnf glial cell line derived neurotrophic factor IMP
IGI
(MGI:3714574|PMID:17537792)
(MGI:81285|PMID:8657308)
(MGI:3043010|PMID:15130495)
MGI
UniProt
PMID:8657308, PMID:15130495, PMID:17537792 MGI:3043010, MGI:3714574, MGI:81285 NCBI chr15:7,810,048...7,837,580
Ensembl chr15:7,810,846...7,837,575
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IGI (MGI:3611729|PMID:16396903) MGI PMID:16396903 MGI:3611729 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Greb1l growth regulation by estrogen in breast cancer-like IMP (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chr18:10,324,933...10,562,945
Ensembl chr18:10,325,177...10,562,940
JBrowse link
G Hoxa11 homeobox A11 IGI (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr 6:52,242,105...52,245,810
Ensembl chr 6:52,242,106...52,245,810
JBrowse link
G Hoxc11 homeobox C11 IGI (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr15:102,954,526...102,956,701
Ensembl chr15:102,954,427...102,957,708
JBrowse link
G Hoxd11 homeobox D11 IGI (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr 2:74,679,558...74,687,016
Ensembl chr 2:74,679,557...74,687,016
JBrowse link
G Id2 inhibitor of DNA binding 2 IMP (MGI:3603100|PMID:15569159) MGI PMID:15569159 MGI:3603100 NCBI chr12:25,093,799...25,096,092
Ensembl chr12:25,093,799...25,097,140
JBrowse link
G Id3 inhibitor of DNA binding 3 IEP (PMID:7655079) UniProtKB PMID:7655079 NCBI chr 4:136,143,822...136,145,392
Ensembl chr 4:136,143,497...136,145,755
JBrowse link
G Irx1 Iroquois homeobox 1 IEP (PMID:17875669) UniProtKB PMID:17875669 NCBI chr13:71,958,232...71,963,723
Ensembl chr13:71,957,921...71,963,723
JBrowse link
G Irx2 Iroquois homeobox 2 IEP (PMID:17875669) UniProtKB PMID:17875669 NCBI chr13:72,624,430...72,634,196
Ensembl chr13:72,628,820...72,634,198
JBrowse link
G Irx3 Iroquois related homeobox 3 IEP (PMID:17875669) UniProtKB PMID:17875669 NCBI chr 8:91,798,511...91,801,654
Ensembl chr 8:91,798,525...91,802,067
JBrowse link
G Itga8 integrin alpha 8 IGI
IMP
(MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chr 2:12,106,632...12,301,985
Ensembl chr 2:12,106,632...12,301,922
JBrowse link
G Lhx1 LIM homeobox protein 1 IEP (PMID:7909549) UniProtKB PMID:7909549 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Nf1 neurofibromin 1 IMP (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chr11:79,339,590...79,581,609
Ensembl chr11:79,339,693...79,581,612
JBrowse link
G Nkx3-1 NK3 homeobox 1 IEP (PMID:9142502) UniProtKB PMID:9142502 NCBI chr14:69,190,692...69,194,658
Ensembl chr14:69,190,638...69,194,662
JBrowse link
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3613210|PMID:16223478) MGI PMID:16223478 MGI:3613210 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Osr2 odd-skipped related 2 IEP (PMID:11520675) UniProtKB PMID:11520675 NCBI chr15:35,296,098...35,303,305
Ensembl chr15:35,296,098...35,303,305
JBrowse link
G Pax2 paired box 2 IGI
IMP
(MGI:2445273|PMID:12435636)
(MGI:77855|PMID:8575306)
MGI PMID:8575306, PMID:12435636 MGI:2445273, MGI:77855 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IEP
IGI
(PMID:1723950)
(MGI:2445273|PMID:12435636)
UniProtKB
MGI
PMID:1723950, PMID:12435636 MGI:2445273 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Pds5a PDS5 cohesin associated factor A IMP (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chr 5:65,605,719...65,698,236
Ensembl chr 5:65,605,721...65,698,273
JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) IMP (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chr 1:16,105,882...16,132,550
Ensembl chr 1:16,105,774...16,133,734
JBrowse link
G Robo2 roundabout guidance receptor 2 IMP (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chr16:73,891,976...75,447,443
Ensembl chr16:73,891,839...74,411,825
JBrowse link
G Shh sonic hedgehog IMP (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Six2 sine oculis-related homeobox 2 IMP (MGI:3691408|PMID:17036046) MGI PMID:17036046 MGI:3691408 NCBI chr17:85,662,736...85,688,254
Ensembl chr17:85,684,277...85,688,274
JBrowse link
G Slc5a1 solute carrier family 5 (sodium/glucose cotransporter), member 1 IMP (MGI:1913165|PMID:10997927) MGI PMID:10997927 MGI:1913165 NCBI chr 5:33,104,219...33,162,699
Ensembl chr 5:33,104,219...33,162,870
JBrowse link
G Slit2 slit guidance ligand 2 IMP (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chr 5:47,981,291...48,307,735
Ensembl chr 5:47,983,138...48,307,733
JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 1:4,490,928...4,497,426
Ensembl chr 1:4,490,931...4,497,354
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 IGI (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chr 3:37,639,947...37,644,599
Ensembl chr 3:37,639,947...37,644,598
JBrowse link
G Tshz3 teashirt zinc finger family member 3 IEP (PMID:18776146) UniProtKB PMID:18776146 NCBI chr 7:36,698,118...36,773,553
Ensembl chr 7:36,698,118...36,773,553
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 TAS
IMP
(MGI:1327700|PMID:9889131)
(MGI:69785|PMID:7990960)
MGI PMID:7990960, PMID:9889131 MGI:1327700, MGI:69785 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
G Wt1 Wilms tumor 1 homolog IMP (MGI:2149238|PMID:11509181)
(MGI:62488|PMID:8395349)
(MGI:1335967|PMID:10322633)
MGI
UniProt
PMID:8395349, PMID:10322633, PMID:11509181 MGI:1335967, MGI:2149238, MGI:62488 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
canonical Wnt signaling pathway involved in metanephric kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 IMP (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr 2:9,857,078...9,887,953
Ensembl chr 2:9,857,078...9,890,034
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IMP (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr 2:109,917,647...110,014,257
Ensembl chr 2:109,917,647...110,014,257
JBrowse link
cell differentiation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IMP (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr 2:109,917,647...110,014,257
Ensembl chr 2:109,917,647...110,014,257
JBrowse link
cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 IMP (MGI:2156986|PMID:10402475) MGI PMID:10402475 MGI:2156986 NCBI chr  X:52,272,426...52,613,974
Ensembl chr  X:52,272,426...52,613,950
JBrowse link
G Ptch1 patched 1 IMP (MGI:4367286|PMID:19809516) MGI PMID:19809516 MGI:4367286 NCBI chr13:63,508,328...63,573,460
Ensembl chr13:63,508,328...63,573,598
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt like transcription factor 1 IMP (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor IMP (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 6:29,735,497...29,761,366
Ensembl chr 6:29,735,503...29,761,365
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Gdnf glial cell line derived neurotrophic factor IEP
ISO
(PMID:10322633) UniProtKB
MGI
PMID:10322633 GO_REF:0000096, MGI:4417868 NCBI chr15:7,810,048...7,837,580
Ensembl chr15:7,810,846...7,837,575
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist IDA (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chr 2:113,748,675...113,758,648
Ensembl chr 2:113,746,164...113,758,646
JBrowse link
G Pax2 paired box 2 IEP (PMID:10322633) UniProtKB PMID:10322633 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 ISO (PMID:8861958) UniProtKB PMID:8861958 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Sall1 spalt like transcription factor 1 IMP (MGI:2149437|PMID:11688560) UniProt PMID:11688560 MGI:2149437 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link
G Six2 sine oculis-related homeobox 2 IEP (PMID:10322633) UniProtKB PMID:10322633 NCBI chr17:85,662,736...85,688,254
Ensembl chr17:85,684,277...85,688,274
JBrowse link
metanephric ascending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor poteintial channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr17:24,548,689...24,596,514
Ensembl chr17:24,549,834...24,596,508
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 IMP (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr 1:42,695,768...42,700,210
Ensembl chr 1:42,694,925...42,703,176
Ensembl chr 1:42,694,925...42,703,176
JBrowse link
G Umod uromodulin IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:119,462,708...119,479,262
Ensembl chr 7:119,462,711...119,479,282
JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
metanephric capsule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 IMP (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr13:98,354,245...98,356,705
Ensembl chr13:98,354,242...98,359,305
JBrowse link
metanephric capsule specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 IMP (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr13:98,354,245...98,356,705
Ensembl chr13:98,354,242...98,359,305
JBrowse link
metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b3 aldo-keto reductase family 1, member B3 (aldose reductase) IMP (MGI:3628967|PMID:16449351) MGI PMID:16449351 MGI:3628967 NCBI chr 6:34,303,930...34,317,489
Ensembl chr 6:34,302,434...34,317,478
JBrowse link
G Aqp2 aquaporin 2 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr15:99,579,056...99,584,545
Ensembl chr15:99,579,055...99,584,547
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP (MGI:3710018|PMID:17442697) UniProt PMID:17442697 MGI:3710018 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Calb1 calbindin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 IMP (MGI:3722974|PMID:17765678) MGI PMID:17765678 MGI:3722974 NCBI chr14:24,133,953...24,245,920
Ensembl chr14:24,133,953...24,245,920
JBrowse link
G Pax2 paired box 2 IMP (MGI:1889171|PMID:10980123) UniProt PMID:10980123 MGI:1889171 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pkd1 polycystin 1, transient receptor poteintial channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr17:24,548,689...24,596,514
Ensembl chr17:24,549,834...24,596,508
JBrowse link
G Ptch1 patched 1 ISO (PMID:17850284) UniProt PMID:17850284 NCBI chr13:63,508,328...63,573,460
Ensembl chr13:63,508,328...63,573,598
JBrowse link
G Shh sonic hedgehog ISO (PMID:17850284) UniProt PMID:17850284 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B IMP (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr15:85,535,437...85,581,821
Ensembl chr15:85,535,437...85,582,473
JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
G Wt1 Wilms tumor 1 homolog IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064
JBrowse link
metanephric cortex development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU domain, class 3, transcription factor 3 IMP (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr 1:42,695,768...42,700,210
Ensembl chr 1:42,694,925...42,703,176
Ensembl chr 1:42,694,925...42,703,176
JBrowse link
metanephric descending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 6:55,336,299...55,348,555
Ensembl chr 6:55,336,432...55,348,555
JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064
JBrowse link
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Umod uromodulin IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:119,462,708...119,479,262
Ensembl chr 7:119,462,711...119,479,282
JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor poteintial channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr17:24,548,689...24,596,514
Ensembl chr17:24,549,834...24,596,508
JBrowse link
metanephric epithelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Pax2 paired box 2 IEP (PMID:7856737) UniProtKB PMID:7856737 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B IMP (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr15:85,535,437...85,581,821
Ensembl chr15:85,535,437...85,582,473
JBrowse link
G Wt1 Wilms tumor 1 homolog ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin, beta 2 IMP (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489) MGI PMID:7670489, PMID:16886065 MGI:3664526, MGI:75217 NCBI chr 9:108,479,847...108,490,530
Ensembl chr 9:108,479,736...108,490,530
JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfra platelet derived growth factor receptor, alpha polypeptide IGI (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr 5:75,151,322...75,198,206
Ensembl chr 5:75,152,292...75,198,215
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide IGI (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
G Tcf21 transcription factor 21 IMP (MGI:2651771|PMID:12619136) UniProt PMID:12619136 MGI:2651771 NCBI chr10:22,817,263...22,820,143
Ensembl chr10:22,817,281...22,820,174
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor, B polypeptide IEP (PMID:9693135) UniProtKB PMID:9693135 NCBI chr15:79,995,865...80,024,614
Ensembl chr15:79,995,874...80,014,977
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor, B polypeptide IMP (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 NCBI chr15:79,995,865...80,024,614
Ensembl chr15:79,995,874...80,014,977
JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 antigen ISO (PMID:1868864) UniProtKB PMID:1868864 NCBI chr 1:194,938,821...194,961,292
Ensembl chr 1:194,938,819...194,961,279
JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor, B polypeptide IMP (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chr15:79,995,865...80,024,614
Ensembl chr15:79,995,874...80,014,977
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide IMP (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor, beta polypeptide IEP (PMID:9693135) UniProtKB PMID:9693135 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin, beta 2 IMP (MGI:3664526|PMID:16886065) MGI PMID:16886065 MGI:3664526 NCBI chr 9:108,479,847...108,490,530
Ensembl chr 9:108,479,736...108,490,530
JBrowse link
G Nphs2 nephrosis 2, podocin ISO (PMID:11786407) UniProtKB PMID:11786407 NCBI chr 1:156,310,535...156,328,035
Ensembl chr 1:156,310,727...156,328,035
JBrowse link
metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IMP (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr 2:109,917,647...110,014,257
Ensembl chr 2:109,917,647...110,014,257
JBrowse link
G Lhx1 LIM homeobox protein 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
metanephric glomerulus morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor, beta polypeptide ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 6:55,336,299...55,348,555
Ensembl chr 6:55,336,432...55,348,555
JBrowse link
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU domain, class 3, transcription factor 3 IMP (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr 1:42,695,768...42,700,210
Ensembl chr 1:42,694,925...42,703,176
Ensembl chr 1:42,694,925...42,703,176
JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B IMP (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr15:85,535,437...85,581,821
Ensembl chr15:85,535,437...85,582,473
JBrowse link
metanephric macula densa development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU domain, class 3, transcription factor 3 IMP (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr 1:42,695,768...42,700,210
Ensembl chr 1:42,694,925...42,703,176
Ensembl chr 1:42,694,925...42,703,176
JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Pax2 paired box 2 IMP (MGI:3663200|PMID:16368682) UniProt PMID:16368682 MGI:3663200 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Tcf21 transcription factor 21 IMP (MGI:2651771|PMID:12619136) UniProt PMID:12619136 MGI:2651771 NCBI chr10:22,817,263...22,820,143
Ensembl chr10:22,817,281...22,820,174
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 NAS (MGI:3663200|PMID:16368682) UniProt PMID:16368682 MGI:3663200 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor, beta polypeptide ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 IGI (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr 2:172,868,012...172,940,321
Ensembl chr 2:172,868,012...172,940,321
JBrowse link
G Shh sonic hedgehog IMP (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
metanephric mesenchyme development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IDA (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Pax2 paired box 2 IDA (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
G Six1 sine oculis-related homeobox 1 IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,041,827...73,046,712
Ensembl chr12:73,040,015...73,053,887
JBrowse link
G Six4 sine oculis-related homeobox 4 IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,099,609...73,114,031
Ensembl chr12:73,099,609...73,113,456
JBrowse link
G Wt1 Wilms tumor 1 homolog IMP (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 IGI (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr 2:172,868,012...172,940,321
Ensembl chr 2:172,868,012...172,940,321
JBrowse link
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Smad4 SMAD family member 4 IMP (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr18:73,634,790...73,703,791
Ensembl chr18:73,639,009...73,703,780
JBrowse link
metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 IMP (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr13:98,354,245...98,356,705
Ensembl chr13:98,354,242...98,359,305
JBrowse link
G Tfap2a transcription factor AP-2, alpha IEP (PMID:7555706) UniProtKB PMID:7555706 NCBI chr13:40,713,802...40,738,238
Ensembl chr13:40,715,302...40,738,376
JBrowse link
G Tfap2b transcription factor AP-2 beta IEP (PMID:7555706) UniProtKB PMID:7555706 NCBI chr 1:19,208,908...19,238,845
Ensembl chr 1:19,208,914...19,238,576
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 IMP (MGI:3784679|PMID:18346943) MGI PMID:18346943 MGI:3784679 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 wingless-type MMTV integration site family, member 4 IMP (MGI:4398804|PMID:19830824) MGI PMID:19830824 MGI:4398804 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 IGI (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090 NCBI chr17:25,565,893...25,570,686
Ensembl chr17:25,565,892...25,570,686
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IGI (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090 NCBI chr11:112,782,210...112,787,757
Ensembl chr11:112,782,224...112,787,760
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 IEP (PMID:15465493) UniProtKB PMID:15465493 NCBI chr16:30,065,357...30,067,796
Ensembl chr16:30,064,384...30,067,796
JBrowse link
G Hes5 hes family bHLH transcription factor 5 IEP (PMID:15465493) UniProtKB PMID:15465493 NCBI chr 4:154,960,626...154,962,372
Ensembl chr 4:154,960,923...154,962,371
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IMP (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr 2:109,917,647...110,014,257
Ensembl chr 2:109,917,647...110,014,257
JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064
JBrowse link
G Foxj1 forkhead box J1 ISO (PMID:9530170) BHF-UCL PMID:9530170 NCBI chr11:116,330,704...116,335,499
Ensembl chr11:116,330,704...116,335,399
JBrowse link
G Lhx1 LIM homeobox protein 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-Coenzyme A acetyltransferase 1 ISO RGD PMID:7733320 RGD:2326090 NCBI chr 9:53,580,522...53,610,350
Ensembl chr 9:53,580,522...53,610,382
JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 6:55,336,299...55,348,555
Ensembl chr 6:55,336,432...55,348,555
JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 6:55,336,299...55,348,555
Ensembl chr 6:55,336,432...55,348,555
JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor poteintial channel interacting ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr17:24,548,689...24,596,514
Ensembl chr17:24,549,834...24,596,508
JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 IEP (PMID:7909549) UniProtKB PMID:7909549 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 IEP (PMID:7909549) UniProtKB PMID:7909549 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
G Wt1 Wilms tumor 1 homolog IEP
ISO
IMP
(PMID:18618131)
(MGI:1333093|PMID:10101119)
UniProtKB
MGI
UniProt
PMID:10101119, PMID:18618131 GO_REF:0000096, MGI:1333093, MGI:4834177 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU domain, class 3, transcription factor 3 IMP (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr 1:42,695,768...42,700,210
Ensembl chr 1:42,694,925...42,703,176
Ensembl chr 1:42,694,925...42,703,176
JBrowse link
G Umod uromodulin IEP (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 7:119,462,708...119,479,262
Ensembl chr 7:119,462,711...119,479,282
JBrowse link
metanephric tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtss1 MTSS I-BAR domain containing 1 IMP (MGI:5317250|PMID:21406566) MGI PMID:21406566 MGI:5317250 NCBI chr15:58,941,234...59,083,956
Ensembl chr15:58,941,234...59,082,005
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IEP (PMID:8787755) UniProtKB PMID:8787755 NCBI chr11:112,782,210...112,787,757
Ensembl chr11:112,782,224...112,787,760
JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B IMP (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr11:103,727,362...103,775,272
Ensembl chr11:103,727,364...103,749,821
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 wingless-type MMTV integration site family, member 4 IMP (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B IMP (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chr11:103,727,362...103,775,272
Ensembl chr11:103,727,364...103,749,821
JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr2 chemokine (C-X-C motif) receptor 2 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:74,153,994...74,161,246
Ensembl chr 1:74,153,989...74,161,246
JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 IMP (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Fgf10 fibroblast growth factor 10 IMP (MGI:3688470|PMID:11062007) MGI PMID:11062007 MGI:3688470 NCBI chr13:118,714,699...118,792,573
Ensembl chr13:118,669,791...118,792,115
JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 IMP (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr 5:96,373,777...96,784,733
Ensembl chr 5:96,373,955...96,784,728
JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B IMP (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr15:85,535,437...85,581,821
Ensembl chr15:85,535,437...85,582,473
JBrowse link
negative regulation of apoptotic process involved in metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B IMP (MGI:4430439|PMID:20040500) MGI PMID:20040500 MGI:4430439 NCBI chr11:83,850,209...83,905,917
Ensembl chr11:83,850,063...83,905,819
JBrowse link
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Wt1 Wilms tumor 1 homolog IMP (MGI:62488|PMID:8395349) MGI PMID:8395349 MGI:62488 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr  X:102,247,378...102,252,181
Ensembl chr  X:102,247,381...102,252,181
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 IDA (MGI:3714576|PMID:17537789) MGI PMID:17537789 MGI:3714576 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Sall1 spalt like transcription factor 1 IMP (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 Wilms tumor 1 homolog IMP (MGI:1332959|PMID:10077614) UniProt PMID:10077614 MGI:1332959 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
negative regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing IDA (MGI:4943654|PMID:19460854) UniProt PMID:19460854 MGI:4943654 NCBI chr16:23,146,536...23,157,968
Ensembl chr16:23,146,536...23,158,028
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 IMP (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr13:98,354,245...98,356,705
Ensembl chr13:98,354,242...98,359,305
JBrowse link
G Osr1 odd-skipped related transcription factor 1 IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr18:34,861,207...34,864,956
Ensembl chr18:34,859,823...34,864,984
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell line derived neurotrophic factor IMP (MGI:81286|PMID:8657306) UniProt PMID:8657306 MGI:81286 NCBI chr15:7,810,048...7,837,580
Ensembl chr15:7,810,846...7,837,575
JBrowse link
G Lif leukemia inhibitory factor ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr11:4,257,568...4,272,514
Ensembl chr11:4,257,557...4,272,514
JBrowse link
G Pax2 paired box 2 IGI (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc myelocytomatosis oncogene IMP (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr15:61,985,341...61,990,361
Ensembl chr15:61,985,391...61,990,374
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing IMP (MGI:3795840|PMID:18431508) UniProt PMID:18431508 MGI:3795840 NCBI chr16:23,146,536...23,157,968
Ensembl chr16:23,146,536...23,158,028
JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chr  X:21,484,624...21,488,833
Ensembl chr  X:21,484,544...21,489,164
JBrowse link
G Pax2 paired box 2 IMP (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Ret ret proto-oncogene IMP (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chr 6:118,151,748...118,197,744
Ensembl chr 6:118,151,745...118,197,718
JBrowse link
positive regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor, B polypeptide ISO MGI GO_REF:0000096, MGI:4417868, MGI:4834177 NCBI chr15:79,995,865...80,024,614
Ensembl chr15:79,995,874...80,014,977
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor, alpha ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 5:138,976,014...139,000,792
Ensembl chr 5:138,976,014...138,997,370
JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr15:79,995,865...80,024,614
Ensembl chr15:79,995,874...80,014,977
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide IMP (MGI:5284758|PMID:19019919) UniProt PMID:19019919 MGI:5284758 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 Wilms tumor 1 homolog IMP (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx1 Iroquois homeobox 1 IEP (PMID:17875669) UniProtKB PMID:17875669 NCBI chr13:71,958,232...71,963,723
Ensembl chr13:71,957,921...71,963,723
JBrowse link
G Irx2 Iroquois homeobox 2 IEP (PMID:17875669) UniProtKB PMID:17875669 NCBI chr13:72,624,430...72,634,196
Ensembl chr13:72,628,820...72,634,198
JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b wingless-type MMTV integration site family, member 9B IDA
IMP
(MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr11:103,727,362...103,775,272
Ensembl chr11:103,727,364...103,749,821
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 IMP (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 3:38,884,667...39,011,992
Ensembl chr 3:38,886,940...39,011,985
JBrowse link
G Lif leukemia inhibitory factor ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr11:4,257,568...4,272,514
Ensembl chr11:4,257,557...4,272,514
JBrowse link
G Pax2 paired box 2 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 IGI (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 3:57,455,644...57,575,910
Ensembl chr 3:57,455,649...57,575,910
JBrowse link
G Yap1 yes-associated protein 1 IGI (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 9:7,931,999...8,004,638
Ensembl chr 9:7,931,999...8,004,596
JBrowse link
regulation of metanephros size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chr  X:21,484,624...21,488,833
Ensembl chr  X:21,484,544...21,489,164
JBrowse link
G Pax2 paired box 2 IMP
ISO
(MGI:3833510|PMID:17881463) UniProt
MGI
PMID:17881463 GO_REF:0000096, MGI:3833510, MGI:4834177 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 IMP (MGI:65439|PMID:7517224) MGI PMID:7517224 MGI:65439 NCBI chr 2:113,327,664...113,716,768
Ensembl chr 2:113,327,736...113,716,767
JBrowse link
G Kif26b kinesin family member 26B IMP (MGI:4454194|PMID:20439720) MGI PMID:20439720 MGI:4454194 NCBI chr 1:178,529,125...178,932,857
Ensembl chr 1:178,529,125...178,939,200
JBrowse link
G Sall1 spalt like transcription factor 1 IMP (MGI:3665498|PMID:16839447)
(MGI:2149437|PMID:11688560)
MGI
UniProt
PMID:11688560, PMID:16839447 MGI:2149437, MGI:3665498 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    developmental process 7030
      anatomical structure development 6504
        animal organ development 4134
          kidney development 373
            metanephros development 99
              cell differentiation involved in metanephros development + 25
              cell migration involved in metanephros development + 4
              cell proliferation involved in metanephros development + 10
              cell-cell signaling involved in metanephros development + 2
              mesenchymal cell apoptotic process involved in metanephros development + 4
              metanephric capsule development + 1
              metanephric collecting duct development + 11
              metanephric cortex development 1
              metanephric epithelium development + 29
              metanephric juxtaglomerular apparatus development + 1
              metanephric mesenchyme development + 13
              metanephric nephron development + 42
              metanephric pyramids development 0
              metanephric smooth muscle tissue development 2
              metanephros morphogenesis + 31
              negative regulation of metanephros development + 1
              pattern specification involved in metanephros development + 4
              positive regulation of metanephros development + 3
              regulation of metanephric glomerulus development + 3
              regulation of metanephros development + 5
              regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
Path 2
Term Annotations click to browse term
  biological_process 23386
    developmental process 7030
      anatomical structure development 6504
        multicellular organism development 5968
          system development 5380
            urogenital system development 436
              renal system development 387
                kidney development 373
                  metanephros development 99
                    cell differentiation involved in metanephros development + 25
                    cell migration involved in metanephros development + 4
                    cell proliferation involved in metanephros development + 10
                    cell-cell signaling involved in metanephros development + 2
                    mesenchymal cell apoptotic process involved in metanephros development + 4
                    metanephric capsule development + 1
                    metanephric collecting duct development + 11
                    metanephric cortex development 1
                    metanephric epithelium development + 29
                    metanephric juxtaglomerular apparatus development + 1
                    metanephric mesenchyme development + 13
                    metanephric nephron development + 42
                    metanephric pyramids development 0
                    metanephric smooth muscle tissue development 2
                    metanephros morphogenesis + 31
                    negative regulation of metanephros development + 1
                    pattern specification involved in metanephros development + 4
                    positive regulation of metanephros development + 3
                    regulation of metanephric glomerulus development + 3
                    regulation of metanephros development + 5
                    regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.