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ONTOLOGY REPORT - ANNOTATIONS


Term:metanephros development
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Accession:GO:0001656 term browser browse the term
Definition:The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.


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metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APH1A aph-1 homolog A, gamma-secretase subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:98,817,574...98,821,255
Ensembl chr 4:98,817,627...98,925,948
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO (MGI:81253|PMID:8623928)
(MGI:70413|PMID:7840250)
MGI PMID:7840250, PMID:8623928 MGI:70413, MGI:81253 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (MGI:2655937|PMID:12631064) MGI PMID:12631064 MGI:2655937 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G BMP7 bone morphogenetic protein 7 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,091...57,676,944
JBrowse link
G CTSH cathepsin H ISS UniProt GO_REF:0000024 NCBI chr 7:48,084,882...48,106,072
Ensembl chr 7:48,083,569...48,106,041
JBrowse link
G CTSS cathepsin S ISO PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,390,250...98,442,936
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:63,970,939...64,328,107
Ensembl chr 4:63,970,511...64,328,105
JBrowse link
G FBN1 fibrillin 1 ISO RGD PMID:9815129 RGD:632672 NCBI chr 1:123,102,011...123,359,649
Ensembl chr 1:123,102,009...123,359,649
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (PMID:18437684) UniProtKB PMID:18437684 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,210...112,814,134
JBrowse link
G FOXC2 forkhead box C2 IEA Ensembl GO_REF:0000107 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367
JBrowse link
G GDF11 growth differentiation factor 11 ISO (MGI:2661314|PMID:12729564) MGI PMID:12729564 MGI:2661314 NCBI chr 5:21,191,322...21,199,024
Ensembl chr 5:21,191,142...21,201,818
JBrowse link
G GDNF glial cell derived neurotrophic factor ISO (MGI:3714574|PMID:17537792)
(MGI:3043010|PMID:15130495)
(MGI:81285|PMID:8657308)
MGI
UniProt
PMID:8657308, PMID:15130495, PMID:17537792 MGI:3043010, MGI:3714574, MGI:81285 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,071...52,697,903
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator IEA Ensembl GO_REF:0000107 NCBI chr 6:106,545,882...106,693,711
Ensembl chr 6:106,419,943...106,691,646
JBrowse link
G HOXA11 homeobox A11 IEA Ensembl GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,574...45,392,573
JBrowse link
G HOXC11 homeobox C11 IEA Ensembl GO_REF:0000107 NCBI chr 5:19,181,580...19,189,031
Ensembl chr 5:19,185,746...19,189,023
JBrowse link
G HOXD11 homeobox D11 ISO (MGI:3036921|PMID:12050119) MGI PMID:12050119 MGI:3036921 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,910,281
JBrowse link
G ID2 inhibitor of DNA binding 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein IEA Ensembl GO_REF:0000107 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,539...81,424,075
JBrowse link
G IRX1 iroquois homeobox 1 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr16:77,695,704...77,701,089
Ensembl chr16:77,695,710...77,701,037
JBrowse link
G IRX2 iroquois homeobox 2 ISO (PMID:17875669) UniProtKB PMID:17875669 NCBI chr16:78,305,869...78,322,776
Ensembl chr16:78,305,898...78,318,071
JBrowse link
G IRX3 iroquois homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:31,044,919...31,049,067
Ensembl chr 6:31,046,098...31,048,822
JBrowse link
G ITGA8 integrin subunit alpha 8 IEA Ensembl GO_REF:0000107 NCBI chr10:46,132,887...46,303,659
Ensembl chr10:46,132,914...46,303,365
JBrowse link
G LHX1 LIM homeobox 1 ISO (PMID:7909549) UniProtKB PMID:7909549 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G NF1 neurofibromin 1 IEA Ensembl GO_REF:0000107 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,171...43,754,176
JBrowse link
G NKX3-1 NK3 homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr14:7,783,296...7,787,036
Ensembl chr14:7,782,421...7,787,034
JBrowse link
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3613210|PMID:16223478) MGI PMID:16223478 MGI:3613210 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G OSR2 odd-skipped related transciption factor 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,852,587...37,897,935
JBrowse link
G PAX2 paired box 2 ISO (MGI:77855|PMID:8575306)
(MGI:2445273|PMID:12435636)
MGI PMID:8575306, PMID:12435636 MGI:2445273, MGI:77855 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G PDS5A PDS5 cohesin associated factor A ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chr 8:30,988,366...31,134,331
Ensembl chr 8:30,988,368...31,134,320
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr 4:62,569,877...62,600,981
Ensembl chr 4:62,571,093...62,601,508
JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chr13:177,365,712...179,040,027
Ensembl chr13:177,365,717...179,013,542
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G SIX2 SIX homeobox 2 ISO (MGI:3691408|PMID:17036046) MGI PMID:17036046 MGI:3691408 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,937...95,464,066
JBrowse link
G SLC5A1 solute carrier family 5 member 1 ISO (MGI:1913165|PMID:10997927) MGI PMID:10997927 MGI:1913165 NCBI chr14:48,566,400...48,704,145
Ensembl chr14:48,566,343...48,705,841
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (MGI:3043010|PMID:15130495) MGI PMID:15130495 MGI:3043010 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
G SOX17 SRY-box transcription factor 17 IEA Ensembl GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,852,230...76,857,139
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:100,449,476...100,863,780
Ensembl chr 8:100,450,247...100,863,446
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 ISO (PMID:18776146) UniProtKB PMID:18776146 NCBI chr 6:41,345,466...41,429,239
Ensembl chr 6:41,345,468...41,423,751
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:69785|PMID:7990960) MGI PMID:7990960 MGI:69785 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WT1 WT1 transcription factor ISO (MGI:2149238|PMID:11509181)
(MGI:62488|PMID:8395349)
(MGI:1335967|PMID:10322633)
MGI
UniProt
PMID:8395349, PMID:10322633, PMID:11509181 MGI:1335967, MGI:2149238, MGI:62488 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
canonical Wnt signaling pathway involved in metanephric kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 IEA Ensembl GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,660...63,388,859
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
cell differentiation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPC3 glypican 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,495...109,973,607
JBrowse link
G PTCH1 patched 1 IEA Ensembl GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,325...26,703,225
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SALL1 spalt like transcription factor 1 ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor IEA Ensembl GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,734...19,479,374
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G GDNF glial cell derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,069...136,629,292
JBrowse link
G PAX2 paired box 2 ISO (PMID:10322633) UniProtKB PMID:10322633 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G SALL1 spalt like transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
G SIX2 SIX homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,937...95,464,066
JBrowse link
metanephric ascending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting IEA Ensembl GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
G POU3F1 POU class 3 homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 6:94,025,133...94,028,053
Ensembl chr 6:94,026,675...94,028,030
JBrowse link
G POU3F3 POU class 3 homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:49,804,112...49,807,730
Ensembl chr 3:49,806,161...49,807,666
JBrowse link
G UMOD uromodulin IEA Ensembl GO_REF:0000107 NCBI chr 3:25,473,048...25,492,286
Ensembl chr 3:25,473,162...25,492,283
JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
metanephric capsule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248
JBrowse link
metanephric capsule specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 IEA Ensembl GO_REF:0000107 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248
JBrowse link
metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B IEA Ensembl GO_REF:0000107 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,593,548...14,752,310
JBrowse link
G AQP2 aquaporin 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:15,862,739...15,868,565
Ensembl chr 5:15,863,303...15,868,565
JBrowse link
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G CALB1 calbindin 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 IEA Ensembl GO_REF:0000107 NCBI chr14:80,249,693...80,377,496
Ensembl chr14:80,249,693...80,377,505
JBrowse link
G PAX2 paired box 2 ISO (MGI:1889171|PMID:10980123) UniProt PMID:10980123 MGI:1889171 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting IEA Ensembl GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455
JBrowse link
G PTCH1 patched 1 IEA Ensembl GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,325...26,703,225
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,695...3,572,314
JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
G WT1 WT1 transcription factor ISO (PMID:18618131) UniProtKB PMID:18618131 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
metanephric cortex development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F1 POU class 3 homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 6:94,025,133...94,028,053
Ensembl chr 6:94,026,675...94,028,030
JBrowse link
G POU3F3 POU class 3 homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:49,804,112...49,807,730
Ensembl chr 3:49,806,161...49,807,666
JBrowse link
metanephric descending thin limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) IEA Ensembl GO_REF:0000107 NCBI chr18:42,063,482...42,076,741 JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G UMOD uromodulin IEA Ensembl GO_REF:0000107 NCBI chr 3:25,473,048...25,492,286
Ensembl chr 3:25,473,162...25,492,283
JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting IEA Ensembl GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455
JBrowse link
metanephric epithelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G PAX2 paired box 2 IEA Ensembl GO_REF:0000107 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,695...3,572,314
JBrowse link
G WT1 WT1 transcription factor ISO (PMID:7856737) UniProtKB PMID:7856737 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 IEA Ensembl GO_REF:0000107 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,284...31,771,220
JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRA platelet derived growth factor receptor alpha IEA Ensembl GO_REF:0000107 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,442
JBrowse link
G PDGFRB platelet derived growth factor receptor beta IEA Ensembl GO_REF:0000107 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
G TCF21 transcription factor 21 ISS UniProt GO_REF:0000024 NCBI chr 1:29,975,280...29,978,273
Ensembl chr 1:29,973,380...29,978,255
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO (PMID:9693135) UniProtKB PMID:9693135 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD34 CD34 molecule IEA Ensembl GO_REF:0000107 NCBI chr 9:134,912,793...134,937,763
Ensembl chr 9:134,913,121...134,937,762
JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
G PDGFRB platelet derived growth factor receptor beta IEA Ensembl GO_REF:0000107 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta ISO (PMID:9693135) UniProtKB PMID:9693135 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 IEA Ensembl GO_REF:0000107 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,284...31,771,220
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin IEA Ensembl GO_REF:0000107 NCBI chr 9:121,217,734...121,236,214
Ensembl chr 9:121,216,496...121,236,178
JBrowse link
metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
G LHX1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
metanephric glomerulus morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) IEA Ensembl GO_REF:0000107 NCBI chr18:42,063,482...42,076,741 JBrowse link
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F1 POU class 3 homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 6:94,025,133...94,028,053
Ensembl chr 6:94,026,675...94,028,030
JBrowse link
G POU3F3 POU class 3 homeobox 3 ISO (MGI:2669573|PMID:12925600) UniProt PMID:12925600 MGI:2669573 NCBI chr 3:49,804,112...49,807,730
Ensembl chr 3:49,806,161...49,807,666
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,695...3,572,314
JBrowse link
metanephric macula densa development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F1 POU class 3 homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 6:94,025,133...94,028,053
Ensembl chr 6:94,026,675...94,028,030
JBrowse link
G POU3F3 POU class 3 homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:49,804,112...49,807,730
Ensembl chr 3:49,806,161...49,807,666
JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G PAX2 paired box 2 ISO (MGI:3663200|PMID:16368682) UniProt PMID:16368682 MGI:3663200 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISS UniProt GO_REF:0000024 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260
JBrowse link
G TCF21 transcription factor 21 ISS UniProt GO_REF:0000024 NCBI chr 1:29,975,280...29,978,273
Ensembl chr 1:29,973,380...29,978,255
JBrowse link
metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 IEA Ensembl GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,091...57,676,944
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISS UniProt GO_REF:0000024 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260
JBrowse link
metanephric mesenchyme development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G PAX2 paired box 2 ISO (MGI:5009359|PMID:20171952) UniProt PMID:20171952 MGI:5009359 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,853...189,628,187
JBrowse link
G SIX4 SIX homeobox 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:189,670,390...189,682,378
Ensembl chr 1:189,670,390...189,682,783
JBrowse link
G WT1 WT1 transcription factor ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 IEA Ensembl GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,091...57,676,944
JBrowse link
G OSR1 odd-skipped related transcription factor 1 ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G SMAD4 SMAD family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,514,791...100,628,029
JBrowse link
metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 IEA Ensembl GO_REF:0000107 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248
JBrowse link
G TFAP2A transcription factor AP-2 alpha ISO (PMID:7555706) UniProtKB PMID:7555706 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,477
JBrowse link
G TFAP2B transcription factor AP-2 beta IEA Ensembl GO_REF:0000107 NCBI chr 7:44,745,653...44,774,563
Ensembl chr 7:44,745,422...44,770,609
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:3784679|PMID:18346943) MGI PMID:18346943 MGI:3784679 NCBI chr 6:80,110,238...80,138,165 JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 ISO (MGI:4398804|PMID:19830824) MGI PMID:19830824 MGI:4398804 NCBI chr 6:80,110,238...80,138,165 JBrowse link
metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G SOX8 SRY-box transcription factor 8 IEA Ensembl GO_REF:0000107 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,710,043...40,830,737
JBrowse link
G SOX9 SRY-box transcription factor 9 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,724...131,138,236
JBrowse link
G HES5 hes family bHLH transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,409,115...64,411,006
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
G FOXJ1 forkhead box J1 IEA Ensembl GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,383...5,311,990
JBrowse link
G LHX1 LIM homeobox 1 ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:7733320 RGD:2326090 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) IEA Ensembl GO_REF:0000107 NCBI chr18:42,063,482...42,076,741 JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) IEA Ensembl GO_REF:0000107 NCBI chr18:42,063,482...42,076,741 JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting IEA Ensembl GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455
JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
G WT1 WT1 transcription factor ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F1 POU class 3 homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 6:94,025,133...94,028,053
Ensembl chr 6:94,026,675...94,028,030
JBrowse link
G POU3F3 POU class 3 homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:49,804,112...49,807,730
Ensembl chr 3:49,806,161...49,807,666
JBrowse link
G UMOD uromodulin IEA Ensembl GO_REF:0000107 NCBI chr 3:25,473,048...25,492,286
Ensembl chr 3:25,473,162...25,492,283
JBrowse link
metanephric tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTSS1 MTSS I-BAR domain containing 1 ISO (MGI:5317250|PMID:21406566) MGI PMID:21406566 MGI:5317250 NCBI chr 4:14,933,290...15,103,256
Ensembl chr 4:14,933,324...15,105,406
JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (PMID:8787755) UniProtKB PMID:8787755 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G WNT9B Wnt family member 9B ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 ISO (MGI:4950307|PMID:21350016) MGI PMID:21350016 MGI:4950307 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT9B Wnt family member 9B IEA Ensembl GO_REF:0000107 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR2 C-X-C motif chemokine receptor 2 ISO RGD PMID:17634442 RGD:7257700 NCBI chr15:120,219,657...120,230,203 JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G FGF10 fibroblast growth factor 10 IEA Ensembl GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:73,502,368...73,959,454
Ensembl chr 8:73,502,664...73,958,083
JBrowse link
G WNT7B Wnt family member 7B ISO (MGI:3821953|PMID:19060336) MGI PMID:19060336 MGI:3821953 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,695...3,572,314
JBrowse link
negative regulation of apoptotic process involved in metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,313,511
JBrowse link
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G WT1 WT1 transcription factor ISO (MGI:62488|PMID:8395349) MGI PMID:8395349 MGI:62488 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 ISO PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:58,179,084...58,184,778
Ensembl chr  X:58,179,087...58,184,499
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
negative regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr13:124,633,906...124,646,237
Ensembl chr13:124,633,684...124,646,648
JBrowse link
negative regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 ISS UniProt GO_REF:0000024 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248
JBrowse link
G OSR1 odd-skipped related transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 ISO PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G LIF LIF interleukin 6 family cytokine IEA Ensembl GO_REF:0000107 NCBI chr14:47,221,540...47,239,513
Ensembl chr14:47,221,560...47,238,749
JBrowse link
G PAX2 paired box 2 ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr13:124,633,906...124,646,237
Ensembl chr13:124,633,684...124,646,648
JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G PAX2 paired box 2 ISO (MGI:3697544|PMID:17047028) UniProt PMID:17047028 MGI:3697544 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G RET ret proto-oncogene IEA Ensembl GO_REF:0000107 NCBI chr14:61,305,818...61,361,416
Ensembl chr14:61,305,841...61,361,415
JBrowse link
positive regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B ISO PMID:19460854
(PMID:10734101)
UniProt
UniProtKB
PMID:10734101, PMID:19460854 RGD:8554838 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A IEA Ensembl GO_REF:0000107 NCBI chr 3:296,399...322,967
Ensembl chr 3:303,311...323,036
JBrowse link
G PDGFB platelet derived growth factor subunit B IEA Ensembl GO_REF:0000107 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
G PDGFRB platelet derived growth factor receptor beta IEA Ensembl GO_REF:0000107 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,754...151,192,647
JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX1 iroquois homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr16:77,695,704...77,701,089
Ensembl chr16:77,695,710...77,701,037
JBrowse link
G IRX2 iroquois homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr16:78,305,869...78,322,776
Ensembl chr16:78,305,898...78,318,071
JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT9B Wnt family member 9B IEA Ensembl GO_REF:0000107 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT4 FAT atypical cadherin 4 ISO (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 8:99,141,967...99,312,131 JBrowse link
G LIF LIF interleukin 6 family cytokine IEA Ensembl GO_REF:0000107 NCBI chr14:47,221,540...47,239,513
Ensembl chr14:47,221,560...47,238,749
JBrowse link
G PAX2 paired box 2 ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G WWTR1 WW domain containing transcription regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr13:89,742,980...89,889,547
Ensembl chr13:89,742,893...89,889,187
JBrowse link
G YAP1 Yes1 associated transcriptional regulator IEA Ensembl GO_REF:0000107 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,416...32,925,603
JBrowse link
regulation of metanephros size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G PAX2 paired box 2 IEA Ensembl GO_REF:0000107 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN1 formin 1 ISO (MGI:65439|PMID:7517224) MGI PMID:7517224 MGI:65439 NCBI chr 1:136,696,353...137,163,532
Ensembl chr 1:136,704,090...137,008,721
JBrowse link
G KIF26B kinesin family member 26B IEA Ensembl GO_REF:0000107 NCBI chr10:17,708,365...18,220,052
Ensembl chr10:17,711,443...18,219,870
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:2149437|PMID:11688560)
(MGI:3665498|PMID:16839447)
UniProt
MGI
PMID:11688560, PMID:16839447 MGI:2149437, MGI:3665498 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16548
    developmental process 6302
      anatomical structure development 5842
        animal organ development 3800
          kidney development 360
            metanephros development 99
              cell differentiation involved in metanephros development + 25
              cell migration involved in metanephros development + 4
              cell proliferation involved in metanephros development + 11
              cell-cell signaling involved in metanephros development + 2
              mesenchymal cell apoptotic process involved in metanephros development + 3
              metanephric capsule development + 1
              metanephric collecting duct development + 10
              metanephric cortex development 1
              metanephric epithelium development + 30
              metanephric juxtaglomerular apparatus development + 2
              metanephric mesenchyme development + 13
              metanephric nephron development + 41
              metanephric pyramids development 0
              metanephric smooth muscle tissue development 2
              metanephros morphogenesis + 30
              negative regulation of metanephros development + 1
              pattern specification involved in metanephros development + 4
              positive regulation of metanephros development + 3
              regulation of metanephric glomerulus development + 3
              regulation of metanephros development + 5
              regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
Path 2
Term Annotations click to browse term
  biological_process 16548
    developmental process 6302
      anatomical structure development 5842
        multicellular organism development 5340
          system development 4963
            urogenital system development 423
              renal system development 373
                kidney development 360
                  metanephros development 99
                    cell differentiation involved in metanephros development + 25
                    cell migration involved in metanephros development + 4
                    cell proliferation involved in metanephros development + 11
                    cell-cell signaling involved in metanephros development + 2
                    mesenchymal cell apoptotic process involved in metanephros development + 3
                    metanephric capsule development + 1
                    metanephric collecting duct development + 10
                    metanephric cortex development 1
                    metanephric epithelium development + 30
                    metanephric juxtaglomerular apparatus development + 2
                    metanephric mesenchyme development + 13
                    metanephric nephron development + 41
                    metanephric pyramids development 0
                    metanephric smooth muscle tissue development 2
                    metanephros morphogenesis + 30
                    negative regulation of metanephros development + 1
                    pattern specification involved in metanephros development + 4
                    positive regulation of metanephros development + 3
                    regulation of metanephric glomerulus development + 3
                    regulation of metanephros development + 5
                    regulation of transcription from RNA polymerase II promoter involved in metanephros development 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.