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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud development
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Accession:GO:0001657 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.


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ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARG2 arginase 2 JBrowse link 14 67,075,941 67,109,962 RGD:9068941
G BDNF brain derived neurotrophic factor JBrowse link 11 27,520,306 27,589,239 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G BMP7 bone morphogenetic protein 7 JBrowse link 20 54,788,974 54,885,015 RGD:9068941
G BMPER BMP binding endothelial regulator JBrowse link 7 34,903,178 35,152,110 RGD:9068941
G CAT catalase JBrowse link 11 34,289,603 34,323,160 RGD:9068941
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 9 15,063,766 15,066,776 RGD:9068941
G CRLF1 cytokine receptor like factor 1 JBrowse link 19 19,040,355 19,048,927 RGD:9068941
G EPCAM epithelial cell adhesion molecule JBrowse link 2A 48,414,791 48,432,038 RGD:9068941
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 8 34,890,147 34,948,904 RGD:9068941
G FGFR2 fibroblast growth factor receptor 2 JBrowse link 10 121,469,735 121,588,815 RGD:9068941
G FOXC2 forkhead box C2 JBrowse link 16 86,569,509 86,571,878 RGD:9068941
G GDF11 growth differentiation factor 11 JBrowse link 12 33,879,143 33,893,027 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G NPNT nephronectin JBrowse link 4 108,974,971 109,054,671 RGD:9068941
G OSR1 odd-skipped related transcription factor 1 JBrowse link 2A 19,451,067 19,458,229 RGD:9068941
G RARA retinoic acid receptor alpha JBrowse link 17 17,156,923 17,205,451 RGD:9068941
G RARB retinoic acid receptor beta JBrowse link 3 25,660,850 25,830,372 RGD:9068941
G RET ret proto-oncogene JBrowse link 10 43,256,437 43,286,340 RGD:9068941
G ROBO2 roundabout guidance receptor 2 JBrowse link 3 78,302,882 79,636,211 RGD:9068941
G SALL1 spalt like transcription factor 1 JBrowse link 16 50,274,081 50,280,239 RGD:9068941
G SDC1 syndecan 1 JBrowse link 2A 20,302,589 20,309,848 RGD:9068941
G SDC4 syndecan 4 JBrowse link 20 42,746,597 42,769,736 RGD:9068941
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 37,956,423 38,001,865 RGD:9068941
G SIM1 SIM bHLH transcription factor 1 JBrowse link 6 102,104,462 102,181,062 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SLIT2 slit guidance ligand 2 JBrowse link 4 19,946,369 20,314,656 RGD:9068941
G SMAD1 SMAD family member 1 JBrowse link 4 149,481,819 149,558,135 RGD:9068941
G SMAD2 SMAD family member 2 JBrowse link 18 44,572,213 44,669,008 RGD:9068941
G SMAD3 SMAD family member 3 JBrowse link 15 64,284,949 64,414,185 RGD:9068941
G SMAD5 SMAD family member 5 JBrowse link 5 137,663,558 137,713,130 RGD:9068941
G SMAD6 SMAD family member 6 JBrowse link 15 63,923,356 64,001,607 RGD:9068941
G SMAD7 SMAD family member 7 JBrowse link 18 45,659,375 45,689,505 RGD:9068941
G SPRY1 sprouty RTK signaling antagonist 1 JBrowse link 4 126,715,650 126,720,973 RGD:9068941
G TCF21 transcription factor 21 JBrowse link 6 135,754,896 135,761,294 RGD:9068941
G TGFB1 transforming growth factor beta 1 JBrowse link 19 46,831,659 46,852,973 RGD:9068941
G WT1 WT1 transcription factor JBrowse link 11 32,238,720 32,282,879 RGD:9068941
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 5 144,056,387 144,161,906 RGD:9068941
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 JBrowse link 5 5,147,570 5,330,721 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 18 59,797,184 59,993,298 RGD:9068941
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,546,173 6,558,627 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 71,621,785 71,627,300 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G CTNNBIP1 catenin beta interacting protein 1 JBrowse link 1 9,846,511 9,882,049 RGD:9068941
G DCHS1 dachsous cadherin-related 1 JBrowse link 11 6,436,082 6,456,464 RGD:9068941
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 3 204,319,410 204,586,232 RGD:9068941
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 8 69,387,769 69,551,829 RGD:9068941
G FAT4 FAT atypical cadherin 4 JBrowse link 4 128,637,516 128,814,413 RGD:9068941
G FGF2 fibroblast growth factor 2 JBrowse link 4 126,149,750 126,220,774 RGD:9068941
G FGF8 fibroblast growth factor 8 JBrowse link 10 101,844,792 101,849,873 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 77,573,466 77,600,478 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,056,566 42,322,865 RGD:9068941
G GPC3 glypican 3 JBrowse link X 132,979,890 133,432,266 RGD:9068941
G GREB1L GREB1 like retinoic acid receptor coactivator JBrowse link 18 18,120,919 18,402,948 RGD:9068941
G GZF1 GDNF inducible zinc finger protein 1 JBrowse link 20 23,655,293 23,666,005 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 7 27,426,602 27,429,092 RGD:9068941
G HOXD11 homeobox D11 JBrowse link 2B 181,095,347 181,098,680 RGD:9068941
G ILK integrin linked kinase JBrowse link 11 6,418,717 6,425,788 RGD:9068941
G LAMA5 laminin subunit alpha 5 JBrowse link 20 59,991,859 60,052,486 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,130,877 127,136,861 RGD:9068941
G NPNT nephronectin JBrowse link 4 108,974,971 109,054,671 RGD:9068941
G PAX2 paired box 2 JBrowse link 10 100,822,676 100,904,065 RGD:9068941
G PAX8 paired box 8 JBrowse link 2A 114,162,110 114,222,865 RGD:9068941
G PBX1 PBX homeobox 1 JBrowse link 1 143,778,426 144,104,493 RGD:9068941
G PGF placental growth factor JBrowse link 14 74,338,976 74,352,964 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 91,019,739 91,088,858 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 94,668,792 94,741,517 RGD:9068941
G SALL1 spalt like transcription factor 1 JBrowse link 16 50,274,081 50,280,239 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 159,116,966 159,126,660 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SMAD4 SMAD family member 4 JBrowse link 18 47,692,311 47,802,530 RGD:9068941
G SOX9 SRY-box transcription factor 9 JBrowse link 17 71,491,419 71,498,911 RGD:9068941
G TCF21 transcription factor 21 JBrowse link 6 135,754,896 135,761,294 RGD:9068941
G WNT1 Wnt family member 1 JBrowse link 12 40,648,413 40,652,583 RGD:9068941
G WNT4 Wnt family member 4 JBrowse link 1 22,252,344 22,264,858 RGD:9068941
G WNT6 Wnt family member 6 JBrowse link 2B 224,714,217 224,728,557 RGD:9068941
G WNT9B Wnt family member 9B JBrowse link 17 10,801,176 10,818,516 RGD:9068941
G WT1 WT1 transcription factor JBrowse link 11 32,238,720 32,282,879 RGD:9068941
mesenchymal cell proliferation involved in ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,546,173 6,558,627 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G GPC3 glypican 3 JBrowse link X 132,979,890 133,432,266 RGD:9068941
metanephric part of ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CALB1 calbindin 1 JBrowse link 8 88,699,532 88,723,814 RGD:9068941
G FOXJ1 forkhead box J1 JBrowse link 17 75,637,615 75,642,571 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 91,019,739 91,088,858 RGD:9068941
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 1 59,544,868 59,547,207 RGD:9068941
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 8,055,853 8,086,271 RGD:9068941
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 8,055,853 8,086,271 RGD:9068941
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGT angiotensinogen JBrowse link 1 211,279,015 211,291,044 RGD:9068941
G AGTR2 angiotensin II receptor type 2 JBrowse link X 115,670,022 115,674,287 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 77,573,466 77,600,478 RGD:9068941
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 30,051,483 30,068,243 RGD:9068941
G HOXB7 homeobox B7 JBrowse link 17 9,110,864 9,114,648 RGD:9068941
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link 11 27,232,801 27,291,571 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,430,618 20,437,751 RGD:9068941
G MAGED1 MAGE family member D1 JBrowse link X 51,893,306 51,992,850 RGD:9068941
G NOG noggin JBrowse link 17 55,532,208 55,533,782 RGD:9068941
G PAX2 paired box 2 JBrowse link 10 100,822,676 100,904,065 RGD:9068941
G PAX8 paired box 8 JBrowse link 2A 114,162,110 114,222,865 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SIX4 SIX homeobox 4 JBrowse link 14 59,580,587 59,592,654 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 133,668,523 133,693,048 RGD:9068941
G SOX8 SRY-box transcription factor 8 JBrowse link 16 982,054 988,955 RGD:9068941
G SOX9 SRY-box transcription factor 9 JBrowse link 17 71,491,419 71,498,911 RGD:9068941
G TGFB1 transforming growth factor beta 1 JBrowse link 19 46,831,659 46,852,973 RGD:9068941
G VEGFA vascular endothelial growth factor A JBrowse link 6 44,651,855 44,666,353 RGD:9068941
G WNT2B Wnt family member 2B JBrowse link 1 125,173,906 125,230,675 RGD:9068941
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BASP1 brain abundant membrane attached signal protein 1 JBrowse link 5 17,352,374 17,410,703 RGD:9068941
G WT1 WT1 transcription factor JBrowse link 11 32,238,720 32,282,879 RGD:9068941
positive regulation of ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 8,055,853 8,086,271 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 77,573,466 77,600,478 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SIX4 SIX homeobox 4 JBrowse link 14 59,580,587 59,592,654 RGD:9068941
primary ureteric bud growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LZTS2 leucine zipper tumor suppressor 2 JBrowse link 10 101,074,043 101,084,732 RGD:9068941
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 17 19,633,424 19,691,863 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 59,515,324 59,518,740 RGD:9068941
G SIX4 SIX homeobox 4 JBrowse link 14 59,580,587 59,592,654 RGD:9068941
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX2 SIX homeobox 2 JBrowse link 2A 46,040,067 46,044,029 RGD:9068941
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 52,821,872 52,828,781 RGD:9068941
ureteric bud elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 17 19,633,424 19,691,863 RGD:9068941
ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 8,055,853 8,086,271 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 77,573,466 77,600,478 RGD:9068941
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 30,051,483 30,068,243 RGD:9068941
G NOG noggin JBrowse link 17 55,532,208 55,533,782 RGD:9068941
ureteric bud invasion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FMN1 formin 1 JBrowse link 15 30,105,345 30,534,051 RGD:9068941
G KIF26B kinesin family member 26B JBrowse link 1 226,343,827 226,688,452 RGD:9068941
G SALL1 spalt like transcription factor 1 JBrowse link 16 50,274,081 50,280,239 RGD:9068941
ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HES1 hes family bHLH transcription factor 1 JBrowse link 3 201,749,044 201,751,591 RGD:9068941
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 1 59,544,868 59,547,207 RGD:9068941
G WNT11 Wnt family member 11 JBrowse link 11 74,540,025 74,560,024 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15679
    developmental process 6086
      anatomical structure development 5636
        tube development 1020
          mesonephric tubule development 98
            ureteric bud development 97
              anterior/posterior pattern specification involved in ureteric bud development + 1
              mesenchymal cell proliferation involved in ureteric bud development 3
              metanephric part of ureteric bud development + 6
              ureter part of ureteric bud development 0
              ureteric bud morphogenesis + 65
Path 2
Term Annotations click to browse term
  biological_process 15679
    developmental process 6086
      anatomical structure development 5636
        multicellular organism development 5165
          system development 4609
            urogenital system development 327
              renal system development 289
                kidney development 279
                  mesonephros development 102
                    mesonephric epithelium development 98
                      mesonephric tubule development 98
                        ureteric bud development 97
                          anterior/posterior pattern specification involved in ureteric bud development + 1
                          mesenchymal cell proliferation involved in ureteric bud development 3
                          metanephric part of ureteric bud development + 6
                          ureter part of ureteric bud development 0
                          ureteric bud morphogenesis + 65
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.