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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud development
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Accession:GO:0001657 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.


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ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BDNF brain derived neurotrophic factor JBrowse link 21 48,191,580 48,243,699 RGD:13508589
G BMP7 bone morphogenetic protein 7 JBrowse link 24 42,203,183 42,294,105 RGD:13508589
G BMPER BMP binding endothelial regulator JBrowse link 14 45,910,634 46,154,922 RGD:13508589
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 11 35,155,568 35,159,085 RGD:13508589
G CRLF1 cytokine receptor like factor 1 JBrowse link 20 44,466,812 44,476,055 RGD:13508589
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 16 27,029,902 27,080,514 RGD:13508589
G FOXC2 forkhead box C2 JBrowse link 5 66,234,336 66,296,007 RGD:13508589
G GDF11 growth differentiation factor 11 JBrowse link 10 142,039 152,537 RGD:13508589
G LHX1 LIM homeobox 1 JBrowse link 9 36,760,890 36,768,345 RGD:13508589
G OSR1 odd-skipped related transcription factor 1 JBrowse link 17 14,508,543 14,515,657 RGD:13508589
G RARA retinoic acid receptor alpha JBrowse link 9 22,254,803 22,298,614 RGD:13508589
G RARB retinoic acid receptor beta JBrowse link 23 18,207,253 18,931,128 RGD:13508589
G SIX1 SIX homeobox 1 JBrowse link 8 35,676,705 35,679,534 RGD:13508589
G SMAD1 SMAD family member 1 JBrowse link 15 44,093,491 44,171,177 RGD:13508589
G SMAD3 SMAD family member 3 JBrowse link 30 31,246,313 31,360,098 RGD:13508589
G SMAD5 SMAD family member 5 JBrowse link 11 24,027,603 24,082,673 RGD:13508589
G SMAD6 SMAD family member 6 JBrowse link 30 30,938,908 31,014,259 RGD:13508589
G SMAD7 SMAD family member 7 JBrowse link 7 79,706,485 79,734,673 RGD:13508589
G SPRY1 sprouty RTK signaling antagonist 1 JBrowse link 19 16,969,869 16,976,573 RGD:13508589
G TCF21 transcription factor 21 JBrowse link 1 26,856,281 26,859,654 RGD:13508589
G TGFB1 transforming growth factor beta 1 JBrowse link 1 112,629,476 112,643,885 RGD:13508589
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 2 37,467,431 37,554,770 RGD:13508589
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 8 29,997,563 30,254,307 RGD:13508589
G CTNNB1 catenin beta 1 JBrowse link 23 10,559,722 10,572,933 RGD:13508589
G DCHS1 dachsous cadherin-related 1 JBrowse link 21 29,927,713 29,955,742 RGD:13508589
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 29 20,176,306 20,595,131 RGD:13508589
G FAT4 FAT atypical cadherin 4 JBrowse link 19 15,157,595 15,332,821 RGD:13508589
G FGF8 fibroblast growth factor 8 JBrowse link 28 14,362,407 14,367,109 RGD:13508589
G GDNF glial cell derived neurotrophic factor JBrowse link 4 70,966,694 70,991,860 RGD:13508589
G GLI3 GLI family zinc finger 3 JBrowse link 18 7,800,817 8,071,531 RGD:13508589
G GPC3 glypican 3 JBrowse link X 104,313,426 104,751,215 RGD:13508589
G GREB1L GREB1 like retinoic acid receptor coactivator JBrowse link 7 66,489,124 66,758,207 RGD:13508589
G GZF1 GDNF inducible zinc finger protein 1 JBrowse link 24 260,139 268,861 RGD:13508589
G HOXA11 homeobox A11 JBrowse link 14 40,355,907 40,360,120 RGD:13508589
G ILK integrin linked kinase JBrowse link 21 29,911,326 29,917,972 RGD:13508589
G LHX1 LIM homeobox 1 JBrowse link 9 36,760,890 36,768,345 RGD:13508589
G PAX8 paired box 8 JBrowse link 17 37,307,130 37,331,729 RGD:13508589
G PBX1 PBX homeobox 1 JBrowse link 38 18,378,997 18,703,694 RGD:13508589
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 32 11,383,441 11,437,603 RGD:13508589
G SHH sonic hedgehog signaling molecule JBrowse link 16 18,650,553 18,663,571 RGD:13508589
G SIX1 SIX homeobox 1 JBrowse link 8 35,676,705 35,679,534 RGD:13508589
G SMAD4 SMAD family member 4 JBrowse link 1 23,875,989 23,930,027 RGD:13508589
G TCF21 transcription factor 21 JBrowse link 1 26,856,281 26,859,654 RGD:13508589
G WNT4 Wnt family member 4 JBrowse link 2 77,112,045 77,129,702 RGD:13508589
G WNT6 Wnt family member 6 JBrowse link 37 25,452,875 25,457,437 RGD:13508589
G WNT9B Wnt family member 9B JBrowse link 9 10,157,607 10,172,664 RGD:13508589
mesenchymal cell proliferation involved in ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 8 29,997,563 30,254,307 RGD:13508589
G GPC3 glypican 3 JBrowse link X 104,313,426 104,751,215 RGD:13508589
metanephric part of ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CALB1 calbindin 1 JBrowse link 29 35,551,836 35,572,985 RGD:13508589
G FOXJ1 forkhead box J1 JBrowse link 9 4,512,898 4,517,764 RGD:13508589
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 32 11,383,441 11,437,603 RGD:13508589
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 8 29,997,563 30,254,307 RGD:13508589
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGT angiotensinogen JBrowse link 4 8,681,192 8,694,059 RGD:13508589
G AGTR2 angiotensin II receptor type 2 JBrowse link X 88,703,551 88,708,451 RGD:13508589
G GDNF glial cell derived neurotrophic factor JBrowse link 4 70,966,694 70,991,860 RGD:13508589
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 30 2,219,535 2,231,868 RGD:13508589
G HOXB7 homeobox B7 JBrowse link 9 24,870,037 24,874,517 RGD:13508589
G LHX1 LIM homeobox 1 JBrowse link 9 36,760,890 36,768,345 RGD:13508589
G PAX8 paired box 8 JBrowse link 17 37,307,130 37,331,729 RGD:13508589
G SIX1 SIX homeobox 1 JBrowse link 8 35,676,705 35,679,534 RGD:13508589
G SIX4 SIX homeobox 4 JBrowse link 8 35,735,893 35,748,976 RGD:13508589
G SOX8 SRY-box transcription factor 8 JBrowse link 6 39,667,941 39,672,716 RGD:13508589
G SOX9 SRY-box transcription factor 9 JBrowse link 9 8,275,049 8,278,172 RGD:13508589
G WNT2B Wnt family member 2B JBrowse link 17 63,034,719 63,054,369 RGD:13508589
positive regulation of ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
G GDNF glial cell derived neurotrophic factor JBrowse link 4 70,966,694 70,991,860 RGD:13508589
G SIX1 SIX homeobox 1 JBrowse link 8 35,676,705 35,679,534 RGD:13508589
G SIX4 SIX homeobox 4 JBrowse link 8 35,735,893 35,748,976 RGD:13508589
primary ureteric bud growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LZTS2 leucine zipper tumor suppressor 2 JBrowse link 28 13,683,029 13,693,194 RGD:13508589
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 9 37,437,992 37,493,200 RGD:13508589
G SIX1 SIX homeobox 1 JBrowse link 8 35,676,705 35,679,534 RGD:13508589
G SIX4 SIX homeobox 4 JBrowse link 8 35,735,893 35,748,976 RGD:13508589
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX2 SIX homeobox 2 JBrowse link 10 47,399,152 47,403,503 RGD:13508589
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 8 29,997,563 30,254,307 RGD:13508589
ureteric bud elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 9 37,437,992 37,493,200 RGD:13508589
ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
G GDNF glial cell derived neurotrophic factor JBrowse link 4 70,966,694 70,991,860 RGD:13508589
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 30 2,219,535 2,231,868 RGD:13508589
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 JBrowse link 6 61,124,393 61,298,912 RGD:13508589
ureteric bud invasion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FMN1 formin 1 JBrowse link 30 1,782,726 2,215,449 RGD:13508589
G KIF26B kinesin family member 26B JBrowse link 7 36,087,483 36,529,334 RGD:13508589
ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WNT11 Wnt family member 11 JBrowse link 21 22,442,496 22,463,040 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13315
    developmental process 3643
      anatomical structure development 3364
        tube development 620
          mesonephric tubule development 61
            ureteric bud development 61
              anterior/posterior pattern specification involved in ureteric bud development + 1
              mesenchymal cell proliferation involved in ureteric bud development 2
              metanephric part of ureteric bud development + 3
              ureter part of ureteric bud development 0
              ureteric bud morphogenesis + 41
Path 2
Term Annotations click to browse term
  biological_process 13315
    developmental process 3643
      anatomical structure development 3364
        multicellular organism development 2982
          system development 2720
            urogenital system development 207
              renal system development 181
                kidney development 174
                  mesonephros development 64
                    mesonephric epithelium development 61
                      mesonephric tubule development 61
                        ureteric bud development 61
                          anterior/posterior pattern specification involved in ureteric bud development + 1
                          mesenchymal cell proliferation involved in ureteric bud development 2
                          metanephric part of ureteric bud development + 3
                          ureter part of ureteric bud development 0
                          ureteric bud morphogenesis + 41
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.