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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud development
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Accession:GO:0001657 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.


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ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg2 arginase type II JBrowse link 12 79,130,788 79,156,301 RGD:2290270
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:2290270
G Bdnf brain derived neurotrophic factor JBrowse link 2 109,674,700 109,727,043 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Bmp7 bone morphogenetic protein 7 JBrowse link 2 172,868,012 172,940,321 RGD:2290270
G Bmper BMP-binding endothelial regulator JBrowse link 9 23,223,076 23,485,215 RGD:2290270
G Cat catalase JBrowse link 2 103,453,904 103,485,153 RGD:2290270
G Cer1 cerberus 1, DAN family BMP antagonist JBrowse link 4 82,881,751 82,885,151 RGD:2290270
G Crlf1 cytokine receptor-like factor 1 JBrowse link 8 70,493,097 70,504,081 RGD:2290270
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 16 31,663,443 31,873,356 RGD:2290270
G Epcam epithelial cell adhesion molecule JBrowse link 17 87,635,979 87,651,127 RGD:2290270
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 1 14,168,953 14,311,035 RGD:2290270
G Fgfr1 fibroblast growth factor receptor 1 JBrowse link 8 25,518,759 25,575,718 RGD:2290270
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 7 130,162,451 130,266,808 RGD:2290270
G Foxc1 forkhead box C1 JBrowse link 13 31,806,646 31,810,635 RGD:2290270
G Foxc2 forkhead box C2 JBrowse link 8 121,116,171 121,118,895 RGD:2290270
G Gdf11 growth differentiation factor 11 JBrowse link 10 128,880,524 128,891,718 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Gsta3 glutathione S-transferase, alpha 3 JBrowse link 1 21,240,565 21,265,575 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,517,975 84,525,534 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Npnt nephronectin JBrowse link 3 132,881,745 132,950,291 RGD:2290270
G Osr1 odd-skipped related transcription factor 1 JBrowse link 12 9,574,442 9,581,500 RGD:2290270
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:2290270
G Rara retinoic acid receptor, alpha JBrowse link 11 98,927,800 98,974,942 RGD:2290270
G Rarb retinoic acid receptor, beta JBrowse link 14 16,430,839 17,082,331 RGD:2290270
G Ret ret proto-oncogene JBrowse link 6 118,151,748 118,197,744 RGD:2290270
G Robo2 roundabout guidance receptor 2 JBrowse link 16 73,891,976 75,447,443 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 8 23,411,383 23,449,632 RGD:2290270
G Sim1 single-minded family bHLH transcription factor 1 JBrowse link 10 50,894,698 50,989,156 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Slit2 slit guidance ligand 2 JBrowse link 5 47,981,291 48,307,735 RGD:2290270
G Smad1 SMAD family member 1 JBrowse link 8 79,338,395 79,399,428 RGD:2290270
G Smad2 SMAD family member 2 JBrowse link 18 76,241,090 76,311,748 RGD:2290270
G Smad3 SMAD family member 3 JBrowse link 9 63,646,766 63,757,994 RGD:2290270
G Smad5 SMAD family member 5 JBrowse link 13 56,703,010 56,742,378 RGD:2290270
G Smad6 SMAD family member 6 JBrowse link 9 63,953,076 64,022,085 RGD:2290270
G Smad7 SMAD family member 7 JBrowse link 18 75,367,365 75,395,935 RGD:2290270
G Smad9 SMAD family member 9 JBrowse link 3 54,755,455 54,801,662 RGD:2290270
G Spry1 sprouty RTK signaling antagonist 1 JBrowse link 3 37,639,291 37,644,599 RGD:2290270
G Tcf21 transcription factor 21 JBrowse link 10 22,817,263 22,820,143 RGD:2290270
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:2290270
G Tshz3 teashirt zinc finger family member 3 JBrowse link 7 36,698,118 36,773,553 RGD:2290270
G Vcan versican JBrowse link 13 89,655,309 89,743,027 RGD:2290270
G Wt1 Wilms tumor 1 homolog JBrowse link 2 105,126,529 105,173,614 RGD:2290270
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf1 fibroblast growth factor 1 JBrowse link 18 38,838,672 38,929,470 RGD:2290270
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts16 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 JBrowse link 13 70,727,798 70,841,845 RGD:2290270
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) JBrowse link 8 124,556,587 124,569,706 RGD:2290270
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:2290270
G Bmp2 bone morphogenetic protein 2 JBrowse link 2 133,552,159 133,562,896 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Cd44 CD44 antigen JBrowse link 2 102,811,141 102,901,669 RGD:2290270
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 JBrowse link X 102,247,378 102,252,181 RGD:2290270
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link 4 149,518,241 149,566,437 RGD:2290270
G Dchs1 dachsous cadherin related 1 JBrowse link 7 105,752,989 105,788,355 RGD:2290270
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 16 31,663,443 31,873,356 RGD:2290270
G Dspp dentin sialophosphoprotein JBrowse link 5 104,170,703 104,180,127 RGD:2290270
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 1 14,168,953 14,311,035 RGD:2290270
G Fat4 FAT atypical cadherin 4 JBrowse link 3 38,884,667 39,011,992 RGD:2290270
G Fgf2 fibroblast growth factor 2 JBrowse link 3 37,348,477 37,410,106 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,941 RGD:2290270
G Foxd1 forkhead box D1 JBrowse link 13 98,354,245 98,356,705 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Gpc3 glypican 3 JBrowse link X 52,272,426 52,613,974 RGD:2290270
G Greb1l growth regulation by estrogen in breast cancer-like JBrowse link 18 10,324,933 10,562,945 RGD:2290270
G Gzf1 GDNF-inducible zinc finger protein 1 JBrowse link 2 148,679,384 148,692,949 RGD:2290270
G Hoxa11 homeobox A11 JBrowse link 6 52,242,105 52,245,810 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Ilk integrin linked kinase JBrowse link 7 105,736,590 105,742,925 RGD:2290270
G Lama5 laminin, alpha 5 JBrowse link 2 180,176,373 180,225,904 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,517,975 84,525,534 RGD:2290270
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:2290270
G Npnt nephronectin JBrowse link 3 132,881,745 132,950,291 RGD:2290270
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:2290270
G Pbx1 pre B cell leukemia homeobox 1 JBrowse link 1 168,119,364 168,432,365 RGD:2290270
G Pgf placental growth factor JBrowse link 12 85,166,637 85,177,785 RGD:2290270
G Pspn persephin JBrowse link 17 56,999,313 57,000,105 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,460 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Smad4 SMAD family member 4 JBrowse link 18 73,634,790 73,703,791 RGD:2290270
G Sox9 SRY (sex determining region Y)-box 9 JBrowse link 11 112,782,210 112,787,757 RGD:2290270
G Tcf21 transcription factor 21 JBrowse link 10 22,817,263 22,820,143 RGD:2290270
G Timeless timeless circadian clock 1 JBrowse link 10 128,232,063 128,252,941 RGD:2290270
G Wnt1 wingless-type MMTV integration site family, member 1 JBrowse link 15 98,789,857 98,793,830 RGD:2290270
G Wnt4 wingless-type MMTV integration site family, member 4 JBrowse link 4 137,277,635 137,299,501 RGD:2290270
G Wnt6 wingless-type MMTV integration site family, member 6 JBrowse link 1 74,754,342 74,785,322 RGD:2290270
G Wnt9b wingless-type MMTV integration site family, member 9B JBrowse link 11 103,727,362 103,775,272 RGD:2290270
G Wt1 Wilms tumor 1 homolog JBrowse link 2 105,126,529 105,173,614 RGD:2290270
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxd1 forkhead box D1 JBrowse link 13 98,354,245 98,356,705 RGD:2290270
mesenchymal cell proliferation involved in ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link 2 133,552,159 133,562,896 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Gpc3 glypican 3 JBrowse link X 52,272,426 52,613,974 RGD:2290270
metanephric part of ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Calb1 calbindin 1 JBrowse link 4 15,881,264 15,906,709 RGD:2290270
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Tacstd2 tumor-associated calcium signal transducer 2 JBrowse link 6 67,534,059 67,535,822 RGD:2290270
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link 2 9,857,078 9,887,953 RGD:2290270
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link 2 9,857,078 9,887,953 RGD:2290270
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) JBrowse link 8 124,556,587 124,569,706 RGD:2290270
G Agtr1a angiotensin II receptor, type 1a JBrowse link 13 30,336,356 30,382,867 RGD:2290270
G Agtr1b angiotensin II receptor, type 1b JBrowse link 3 20,314,473 20,367,177 RGD:2290270
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 21,484,549 21,488,833 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 2 113,748,674 113,759,317 RGD:2290270
G Hoxb7 homeobox B7 JBrowse link 11 96,285,604 96,290,163 RGD:2290270
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 JBrowse link 2 109,917,647 110,014,257 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,517,975 84,525,534 RGD:2290270
G Maged1 melanoma antigen, family D, 1 JBrowse link X 94,535,474 94,542,025 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:2290270
G Pax8 paired box 8 JBrowse link 2 24,420,551 24,475,599 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Six4 sine oculis-related homeobox 4 JBrowse link 12 73,099,609 73,114,031 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Sox8 SRY (sex determining region Y)-box 8 JBrowse link 17 25,565,893 25,570,686 RGD:2290270
G Sox9 SRY (sex determining region Y)-box 9 JBrowse link 11 112,782,210 112,787,757 RGD:2290270
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:2290270
G Vegfa vascular endothelial growth factor A JBrowse link 17 46,016,993 46,032,377 RGD:2290270
G Wnt2b wingless-type MMTV integration site family, member 2B JBrowse link 3 104,944,805 104,961,709 RGD:2290270
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wt1 Wilms tumor 1 homolog JBrowse link 2 105,126,529 105,173,614 RGD:2290270
positive regulation of ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link 2 9,857,078 9,887,953 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Six4 sine oculis-related homeobox 4 JBrowse link 12 73,099,609 73,114,031 RGD:2290270
primary ureteric bud growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lzts2 leucine zipper, putative tumor suppressor 2 JBrowse link 19 45,015,176 45,027,115 RGD:2290270
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1b HNF1 homeobox B JBrowse link 11 83,850,209 83,905,917 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Six4 sine oculis-related homeobox 4 JBrowse link 12 73,099,609 73,114,031 RGD:2290270
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Six2 sine oculis-related homeobox 2 JBrowse link 17 85,662,736 85,688,254 RGD:2290270
regulation of ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
ureteric bud elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1b HNF1 homeobox B JBrowse link 11 83,850,209 83,905,917 RGD:2290270
ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link 2 9,857,078 9,887,953 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 2 113,748,674 113,759,317 RGD:2290270
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 JBrowse link 3 144,429,701 144,570,216 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
ureteric bud invasion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmn1 formin 1 JBrowse link 2 113,327,664 113,716,768 RGD:2290270
G Kif26b kinesin family member 26B JBrowse link 1 178,529,125 178,932,857 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:2290270
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 JBrowse link 3 8,663,359 8,667,038 RGD:2290270
G Tacstd2 tumor-associated calcium signal transducer 2 JBrowse link 6 67,534,059 67,535,822 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23015
    developmental process 6306
      anatomical structure development 5847
        tube development 1131
          mesonephric tubule development 106
            ureteric bud development 106
              anterior/posterior pattern specification involved in ureteric bud development + 1
              mesenchymal cell proliferation involved in ureteric bud development 3
              metanephric part of ureteric bud development + 2
              ureter part of ureteric bud development 0
              ureteric bud morphogenesis + 73
Path 2
Term Annotations click to browse term
  biological_process 23015
    developmental process 6306
      anatomical structure development 5847
        multicellular organism development 5339
          system development 4730
            urogenital system development 346
              renal system development 302
                kidney development 282
                  mesonephros development 109
                    mesonephric epithelium development 106
                      mesonephric tubule development 106
                        ureteric bud development 106
                          anterior/posterior pattern specification involved in ureteric bud development + 1
                          mesenchymal cell proliferation involved in ureteric bud development 3
                          metanephric part of ureteric bud development + 2
                          ureter part of ureteric bud development 0
                          ureteric bud morphogenesis + 73
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.