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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud development
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Accession:GO:0001657 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.


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ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARG2 arginase 2 JBrowse link 7 91,343,987 91,385,911 RGD:14298760
G BDNF brain derived neurotrophic factor JBrowse link 2 32,623,668 32,679,293 RGD:14298760
G BMPER BMP binding endothelial regulator JBrowse link 18 39,417,830 39,664,010 RGD:14298760
G CER1 cerberus 1, DAN family BMP antagonist JBrowse link 1 207,817,095 207,821,800 RGD:14298760
G CRLF1 cytokine receptor like factor 1 JBrowse link 2 59,222,551 59,233,723 RGD:14298760
G EPCAM epithelial cell adhesion molecule JBrowse link 3 93,169,800 93,185,221 RGD:14298760
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 15 48,053,895 48,106,634 RGD:14298760
G FOXC1 forkhead box C1 JBrowse link 7 837,088 840,593 RGD:14298760
G FOXC2 forkhead box C2 JBrowse link 6 2,552,141 2,555,041 RGD:14298760
G GDF11 growth differentiation factor 11 JBrowse link 5 21,191,322 21,199,024 RGD:14298760
G OSR1 odd-skipped related transcription factor 1 JBrowse link 3 118,368,471 118,765,107 RGD:14298760
G RARA retinoic acid receptor alpha JBrowse link 12 22,047,449 22,085,759 RGD:14298760
G RET ret proto-oncogene JBrowse link 14 61,305,818 61,361,416 RGD:14298760
G ROBO2 roundabout guidance receptor 2 JBrowse link 13 177,365,712 179,040,027 RGD:14298760
G SFRP1 secreted frizzled related protein 1 JBrowse link 17 10,436,414 10,489,773 RGD:14298760
G SIM1 SIM bHLH transcription factor 1 JBrowse link 1 67,213,685 67,294,455 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SLIT2 slit guidance ligand 2 JBrowse link 8 14,758,426 15,149,515 RGD:14298760
G SMAD1 SMAD family member 1 JBrowse link 8 82,907,557 82,987,909 RGD:14298760
G SMAD2 SMAD family member 2 JBrowse link 1 97,415,360 97,511,388 RGD:14298760
G SMAD5 SMAD family member 5 JBrowse link 2 138,287,635 138,344,092 RGD:14298760
G SMAD6 SMAD family member 6 JBrowse link 1 164,652,602 164,735,084 RGD:14298760
G SMAD7 SMAD family member 7 JBrowse link 1 98,512,800 98,543,924 RGD:14298760
G SPRY1 sprouty RTK signaling antagonist 1 JBrowse link 8 100,449,476 100,863,780 RGD:14298760
G TCF21 transcription factor 21 JBrowse link 1 29,975,280 29,978,273 RGD:14298760
G TGFB1 transforming growth factor beta 1 JBrowse link 6 49,332,169 49,348,642 RGD:14298760
G WT1 WT1 transcription factor JBrowse link 2 28,411,467 28,456,007 RGD:14298760
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 2 144,133,846 144,241,345 RGD:14298760
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 JBrowse link 16 76,326,718 76,491,050 RGD:14298760
G BMP2 bone morphogenetic protein 2 JBrowse link 17 15,750,487 15,762,982 RGD:14298760
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:14298760
G CTNNBIP1 catenin beta interacting protein 1 JBrowse link 6 70,184,935 70,241,560 RGD:14298760
G DCHS1 dachsous cadherin-related 1 JBrowse link 9 3,099,525 3,134,825 RGD:14298760
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 13 132,819,931 133,084,880 RGD:14298760
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 4 63,970,939 64,328,107 RGD:14298760
G GDNF glial cell derived neurotrophic factor JBrowse link 16 22,936,602 22,965,929 RGD:14298760
G GLI3 GLI family zinc finger 3 JBrowse link 18 52,403,463 52,697,906 RGD:14298760
G GPC3 glypican 3 JBrowse link X 109,536,495 109,973,605 RGD:14298760
G GREB1L GREB1 like retinoic acid receptor coactivator JBrowse link 6 106,545,882 106,693,711 RGD:14298760
G HOXA11 homeobox A11 JBrowse link 18 45,388,523 45,392,190 RGD:14298760
G ILK integrin linked kinase JBrowse link 9 3,145,647 3,152,097 RGD:14298760
G LHX1 LIM homeobox 1 JBrowse link 12 38,450,708 38,457,583 RGD:14298760
G PAX2 paired box 2 JBrowse link 14 111,822,334 111,914,950 RGD:14298760
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 8 131,002,973 131,058,932 RGD:14298760
G PTCH1 patched 1 JBrowse link 10 26,627,165 26,703,225 RGD:14298760
G SHH sonic hedgehog signaling molecule JBrowse link 18 2,546,202 2,555,484 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SMAD4 SMAD family member 4 JBrowse link 1 100,521,843 100,633,501 RGD:14298760
G SOX9 SRY-box transcription factor 9 JBrowse link 12 8,642,154 8,647,315 RGD:14298760
G TCF21 transcription factor 21 JBrowse link 1 29,975,280 29,978,273 RGD:14298760
G WNT1 Wnt family member 1 JBrowse link 5 15,010,607 15,015,007 RGD:14298760
G WNT6 Wnt family member 6 JBrowse link 15 120,901,471 120,917,359 RGD:14298760
G WNT9B Wnt family member 9B JBrowse link 12 17,709,046 17,733,434 RGD:14298760
G WT1 WT1 transcription factor JBrowse link 2 28,411,467 28,456,007 RGD:14298760
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FOXD1 forkhead box D1 JBrowse link 2 82,607,113 82,612,005 RGD:14298760
mesenchymal cell proliferation involved in ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP2 bone morphogenetic protein 2 JBrowse link 17 15,750,487 15,762,982 RGD:14298760
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:14298760
G GPC3 glypican 3 JBrowse link X 109,536,495 109,973,605 RGD:14298760
metanephric part of ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CALB1 calbindin 1 JBrowse link 4 46,701,276 46,723,548 RGD:14298760
G FOXJ1 forkhead box J1 JBrowse link 12 5,307,370 5,312,117 RGD:14298760
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 8 131,002,973 131,058,932 RGD:14298760
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:14298760
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 6 153,859,488 153,861,508 RGD:14298760
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 63,367,684 63,397,977 RGD:14298760
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 63,367,684 63,397,977 RGD:14298760
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGT angiotensinogen JBrowse link 14 59,643,030 59,656,835 RGD:14298760
G AGTR2 angiotensin II receptor type 2 JBrowse link X 95,267,709 95,272,237 RGD:14298760
G GDNF glial cell derived neurotrophic factor JBrowse link 16 22,936,602 22,965,929 RGD:14298760
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 1 136,617,041 136,629,293 RGD:14298760
G HOXB7 homeobox B7 JBrowse link 12 24,861,165 24,864,675 RGD:14298760
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link 2 32,871,837 32,979,150 RGD:14298760
G LHX1 LIM homeobox 1 JBrowse link 12 38,450,708 38,457,583 RGD:14298760
G NOG noggin JBrowse link 12 32,891,321 32,892,206 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SIX4 SIX homeobox 4 JBrowse link 1 189,670,390 189,682,378 RGD:14298760
G SMO smoothened, frizzled class receptor JBrowse link 18 19,450,730 19,478,796 RGD:14298760
G SOX8 SRY-box transcription factor 8 JBrowse link 3 40,825,151 40,830,085 RGD:14298760
G SOX9 SRY-box transcription factor 9 JBrowse link 12 8,642,154 8,647,315 RGD:14298760
G WNT2B Wnt family member 2B JBrowse link 4 107,906,141 107,923,343 RGD:14298760
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WT1 WT1 transcription factor JBrowse link 2 28,411,467 28,456,007 RGD:14298760
positive regulation of ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 63,367,684 63,397,977 RGD:14298760
G GDNF glial cell derived neurotrophic factor JBrowse link 16 22,936,602 22,965,929 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SIX4 SIX homeobox 4 JBrowse link 1 189,670,390 189,682,378 RGD:14298760
primary ureteric bud growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LZTS2 leucine zipper tumor suppressor 2 JBrowse link 14 112,078,211 112,088,484 RGD:14298760
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 12 39,143,119 39,201,631 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SIX4 SIX homeobox 4 JBrowse link 1 189,670,390 189,682,378 RGD:14298760
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX2 SIX homeobox 2 JBrowse link 3 95,460,046 95,463,428 RGD:14298760
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:14298760
ureteric bud elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 12 39,143,119 39,201,631 RGD:14298760
ureteric bud formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 10 63,367,684 63,397,977 RGD:14298760
G GDNF glial cell derived neurotrophic factor JBrowse link 16 22,936,602 22,965,929 RGD:14298760
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 1 136,617,041 136,629,293 RGD:14298760
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 JBrowse link 4 129,101,900 129,258,372 RGD:14298760
G NOG noggin JBrowse link 12 32,891,321 32,892,206 RGD:14298760
ureteric bud invasion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIF26B kinesin family member 26B JBrowse link 10 17,708,365 18,220,052 RGD:14298760
ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HES1 hes family bHLH transcription factor 1 JBrowse link 13 131,135,970 131,137,865 RGD:14298760
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 6 153,859,488 153,861,508 RGD:14298760
G WNT11 Wnt family member 11 JBrowse link 9 10,413,182 10,435,158 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14320
    developmental process 4164
      anatomical structure development 3865
        tube development 721
          mesonephric tubule development 73
            ureteric bud development 73
              anterior/posterior pattern specification involved in ureteric bud development + 1
              mesenchymal cell proliferation involved in ureteric bud development 3
              metanephric part of ureteric bud development + 4
              ureter part of ureteric bud development 0
              ureteric bud morphogenesis + 47
Path 2
Term Annotations click to browse term
  biological_process 14320
    developmental process 4164
      anatomical structure development 3865
        multicellular organism development 3430
          system development 3132
            urogenital system development 236
              renal system development 201
                kidney development 194
                  mesonephros development 77
                    mesonephric epithelium development 73
                      mesonephric tubule development 73
                        ureteric bud development 73
                          anterior/posterior pattern specification involved in ureteric bud development + 1
                          mesenchymal cell proliferation involved in ureteric bud development 3
                          metanephric part of ureteric bud development + 4
                          ureter part of ureteric bud development 0
                          ureteric bud morphogenesis + 47
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.