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ONTOLOGY REPORT - ANNOTATIONS


Term:branching involved in ureteric bud morphogenesis
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Accession:GO:0001658 term browser browse the term
Definition:The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.
Synonyms:exact_synonym: ureteric bud branching


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branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 JBrowse link 5 5,470,841 5,651,360 RGD:9068941
G AGT angiotensinogen JBrowse link 1 206,252,141 206,263,830 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 18 56,481,212 56,679,012 RGD:9068941
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,765,161 6,777,728 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 34,542,132 34,549,286 RGD:9068941
G CD44 CD44 molecule (Indian blood group) JBrowse link 11 35,110,732 35,258,238 RGD:9068941
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 61,537,949 61,543,545 RGD:9068941
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 137,134,142 137,136,550 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,104,940 41,145,934 RGD:9068941
G CTNNBIP1 catenin beta interacting protein 1 JBrowse link 1 8,615,241 8,677,324 RGD:9068941
G DCHS1 dachsous cadherin-related 1 JBrowse link 11 6,753,383 6,787,896 RGD:9068941
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 3 194,386,263 194,648,015 RGD:9068941
G DSPP dentin sialophosphoprotein JBrowse link 4 79,903,923 79,909,836 RGD:9068941
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 8 67,728,057 68,060,069 RGD:9068941
G FAT4 FAT atypical cadherin 4 JBrowse link 4 117,494,842 117,674,382 RGD:9068941
G FGF2 fibroblast growth factor 2 JBrowse link 4 115,005,136 115,076,369 RGD:9068941
G FGF8 fibroblast growth factor 8 JBrowse link 10 98,372,251 98,378,811 RGD:9068941
G FOXD1 forkhead box D1 JBrowse link 5 41,867,118 41,870,497 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 72,539,374 72,566,918 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,004,965 42,280,772 RGD:9068941
G GPC3 glypican 3 JBrowse link X 122,677,072 123,131,511 RGD:9068941
G GREB1L GREB1 like retinoic acid receptor coactivator JBrowse link 18 14,482,493 14,763,789 RGD:9068941
G GZF1 GDNF inducible zinc finger protein 1 JBrowse link 20 23,302,958 23,316,469 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 7 27,826,003 27,829,757 RGD:9068941
G HOXD11 homeobox D11 JBrowse link 2B 63,386,806 63,398,777 RGD:9068941
G ILK integrin linked kinase JBrowse link 11 6,735,735 6,742,922 RGD:9068941
G LAMA5 laminin subunit alpha 5 JBrowse link 20 58,673,850 58,677,760 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,134,308 20,140,652 RGD:9068941
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 124,387,561 124,393,551 RGD:9068941
G NPNT nephronectin JBrowse link 4 98,365,727 98,445,746 RGD:9068941
G PAX2 paired box 2 JBrowse link 10 97,344,978 97,429,086 RGD:9068941
G PAX8 paired box 8 JBrowse link 2A 88,845,877 88,905,266 RGD:9068941
G PBX1 PBX homeobox 1 JBrowse link 1 139,985,392 140,311,845 RGD:9068941
G PGF placental growth factor JBrowse link 14 55,494,152 55,508,066 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 80,295,243 80,365,271 RGD:9068941
G PSPN persephin JBrowse link 19 5,396,022 5,398,108 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 66,542,675 66,616,820 RGD:9068941
G SALL1 spalt like transcription factor 1 JBrowse link 16 31,396,399 31,412,753 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 147,400,112 147,414,036 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 41,250,512 41,256,567 RGD:9068941
G SMAD4 SMAD family member 4 JBrowse link 18 44,402,112 44,456,779 RGD:9068941
G SOX9 SRY-box transcription factor 9 JBrowse link 17 66,028,737 66,034,122 RGD:9068941
G TCF21 transcription factor 21 JBrowse link 6 131,656,582 131,662,983 RGD:9068941
G TIMELESS timeless circadian regulator JBrowse link 12 32,465,529 32,497,581 RGD:9068941
G WNT1 Wnt family member 1 JBrowse link 12 39,767,839 39,772,460 RGD:9068941
G WNT4 Wnt family member 4 JBrowse link 1 21,310,228 21,335,985 RGD:9068941
G WNT6 Wnt family member 6 JBrowse link 2B 106,119,740 106,134,317 RGD:9068941
G WNT9B Wnt family member 9B JBrowse link 17 10,616,957 10,651,954 RGD:9068941
G WT1 WT1 transcription factor JBrowse link 11 32,349,807 32,398,494 RGD:9068941
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 5 137,949,100 138,054,553 RGD:9068941
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FOXD1 forkhead box D1 JBrowse link 5 41,867,118 41,870,497 RGD:9068941
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 34,542,132 34,549,286 RGD:9068941
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 34,542,132 34,549,286 RGD:9068941
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 1 57,838,661 57,841,444 RGD:9068941
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGT angiotensinogen JBrowse link 1 206,252,141 206,263,830 RGD:9068941
G AGTR1 angiotensin II receptor type 1 JBrowse link 3 145,722,475 145,767,550 RGD:9068941
G AGTR2 angiotensin II receptor type 2 JBrowse link X 105,252,903 105,257,171 RGD:9068941
G BMP4 bone morphogenetic protein 4 JBrowse link 14 34,542,132 34,549,286 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 72,539,374 72,566,918 RGD:9068941
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 11,213,870 11,230,619 RGD:9068941
G HOXB7 homeobox B7 JBrowse link 17 8,925,717 8,929,523 RGD:9068941
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link 11 27,330,279 27,437,201 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 17 20,134,308 20,140,652 RGD:9068941
G MAGED1 MAGE family member D1 JBrowse link X 43,999,576 44,098,848 RGD:9068941
G NOG noggin JBrowse link 17 50,669,186 50,671,081 RGD:9068941
G PAX2 paired box 2 JBrowse link 10 97,344,978 97,429,086 RGD:9068941
G PAX8 paired box 8 JBrowse link 2A 88,845,877 88,905,266 RGD:9068941
G SALL1 spalt like transcription factor 1 JBrowse link 16 31,396,399 31,412,753 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 41,250,512 41,256,567 RGD:9068941
G SIX4 SIX homeobox 4 JBrowse link 14 41,316,169 41,332,160 RGD:9068941
G SMO smoothened, frizzled class receptor JBrowse link 7 121,143,968 121,168,873 RGD:9068941
G SOX8 SRY-box transcription factor 8 RGD:9068941
G SOX9 SRY-box transcription factor 9 JBrowse link 17 66,028,737 66,034,122 RGD:9068941
G TGFB1 transforming growth factor beta 1 JBrowse link 19 38,324,009 38,347,003 RGD:9068941
G VEGFA vascular endothelial growth factor A JBrowse link 6 43,361,053 43,377,366 RGD:9068941
G WNT2B Wnt family member 2B JBrowse link 1 115,119,360 115,177,942 RGD:9068941
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 17 19,333,485 19,392,147 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 41,250,512 41,256,567 RGD:9068941
G SIX4 SIX homeobox 4 JBrowse link 14 41,316,169 41,332,160 RGD:9068941
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX2 SIX homeobox 2 JBrowse link 2A 45,109,414 45,113,887 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12490
    multicellular organismal process 6426
      morphogenesis of a branching structure 242
        morphogenesis of a branching epithelium 223
          branching morphogenesis of an epithelial tube 186
            branching involved in ureteric bud morphogenesis 66
              branch elongation involved in ureteric bud branching + 5
              canonical Wnt signaling pathway involved in ureteric bud branching 0
              dichotomous subdivision of terminal units involved in ureteric bud branching 1
              lateral sprouting involved in ureteric bud morphogenesis 0
              negative regulation of branching involved in ureteric bud morphogenesis + 2
              positive regulation of branching involved in ureteric bud morphogenesis 22
              regulation of branching involved in ureteric bud morphogenesis + 25
              trifid subdivision of terminal units involved in ureteric bud branching 0
Path 2
Term Annotations click to browse term
  biological_process 12490
    developmental process 5768
      anatomical structure development 5385
        multicellular organism development 4926
          system development 4653
            urogenital system development 413
              renal system development 367
                kidney development 353
                  nephron development 164
                    nephron epithelium development 122
                      nephron tubule development 104
                        nephron tubule morphogenesis 84
                          mesonephric tubule morphogenesis 75
                            ureteric bud morphogenesis 74
                              branching involved in ureteric bud morphogenesis 66
                                branch elongation involved in ureteric bud branching + 5
                                canonical Wnt signaling pathway involved in ureteric bud branching 0
                                dichotomous subdivision of terminal units involved in ureteric bud branching 1
                                lateral sprouting involved in ureteric bud morphogenesis 0
                                negative regulation of branching involved in ureteric bud morphogenesis + 2
                                positive regulation of branching involved in ureteric bud morphogenesis 22
                                regulation of branching involved in ureteric bud morphogenesis + 25
                                trifid subdivision of terminal units involved in ureteric bud branching 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.