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ONTOLOGY REPORT - ANNOTATIONS


Term:branching involved in ureteric bud morphogenesis
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Accession:GO:0001658 term browser browse the term
Definition:The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.
Synonyms:exact_synonym: ureteric bud branching


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branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 JBrowse link 5 5,140,330 5,320,304 RGD:2290271
G AGT angiotensinogen JBrowse link 1 230,702,523 230,745,583 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:2290271
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,767,686 6,780,246 RGD:2290271
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:2290271
G CD44 CD44 molecule (Indian blood group) JBrowse link 11 35,139,168 35,232,402 RGD:9068941
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 72,301,638 72,307,157 RGD:2290271
RGD:9068941
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 139,371,807 139,374,648 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:2290271
G CTNNBIP1 catenin beta interacting protein 1 JBrowse link 1 9,848,276 9,910,322 RGD:2290271
G DCHS1 dachsous cadherin-related 1 JBrowse link 11 6,621,330 6,655,809 RGD:2290271
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 3 197,042,560 197,299,321 RGD:2290271
G DSPP dentin sialophosphoprotein JBrowse link 4 87,608,529 87,616,873 RGD:9068941
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 8 71,197,433 71,548,104 RGD:2290271
G FAT4 FAT atypical cadherin 4 JBrowse link 4 125,314,918 125,492,932 RGD:2290271
G FGF2 fibroblast growth factor 2 JBrowse link 4 122,826,708 122,898,236 RGD:2290271
G FGF8 fibroblast growth factor 8 JBrowse link 10 101,770,109 101,780,369 RGD:2290271
G FOXD1 forkhead box D1 JBrowse link 5 73,446,266 73,448,777 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 37,812,677 37,840,044 RGD:2290271
G GLI3 GLI family zinc finger 3 JBrowse link 7 41,960,949 42,237,209 RGD:2290271
G GPC3 glypican 3 JBrowse link X 133,535,745 133,985,616 RGD:2290271
G GREB1L GREB1 like retinoic acid receptor coactivator JBrowse link 18 21,242,225 21,528,503 RGD:2290271
G GZF1 GDNF inducible zinc finger protein 1 JBrowse link 20 23,361,585 23,375,399 RGD:2290271
G HOXA11 homeobox A11 JBrowse link 7 27,181,157 27,185,232 RGD:2290271
G HOXD11 homeobox D11 JBrowse link 2 176,107,280 176,109,754 RGD:2290271
G ILK integrin linked kinase JBrowse link 11 6,603,708 6,610,874 RGD:2290271
G LAMA5 laminin subunit alpha 5 JBrowse link 20 62,309,060 62,367,318 RGD:2290271
G LHX1 LIM homeobox 1 JBrowse link 17 36,937,475 36,944,612 RGD:2290271
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:2290271
G NPNT nephronectin JBrowse link 4 105,895,453 105,971,671 RGD:2290271
G PAX2 paired box 2 JBrowse link 10 100,735,396 100,829,944 RGD:2290271
G PAX8 paired box 8 JBrowse link 2 113,215,997 113,278,921 RGD:2290271
G PBX1 PBX homeobox 1 JBrowse link 1 164,559,184 164,886,047 RGD:2290271
G PGF placental growth factor JBrowse link 14 74,941,830 74,955,764 RGD:2290271
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 4 88,007,635 88,077,779 RGD:2290271
G PSPN persephin JBrowse link 19 6,375,148 6,375,916 RGD:9068941
G PTCH1 patched 1 JBrowse link 9 95,442,980 95,516,971 RGD:2290271
G SALL1 spalt like transcription factor 1 JBrowse link 16 51,135,975 51,151,270 RGD:2290271
G SHH sonic hedgehog signaling molecule JBrowse link 7 155,799,980 155,812,463 RGD:2290271
G SIX1 SIX homeobox 1 JBrowse link 14 60,643,421 60,649,489 RGD:2290271
G SMAD4 SMAD family member 4 JBrowse link 18 51,030,213 51,085,042 RGD:2290271
G SOX9 SRY-box transcription factor 9 JBrowse link 17 72,121,020 72,126,416 RGD:2290271
G TCF21 transcription factor 21 JBrowse link 6 133,889,113 133,895,537 RGD:2290271
G TIMELESS timeless circadian regulator JBrowse link 12 56,416,363 56,449,426 RGD:9068941
G WNT1 Wnt family member 1 JBrowse link 12 48,978,322 48,982,620 RGD:2290271
G WNT4 Wnt family member 4 JBrowse link 1 22,117,308 22,143,981 RGD:2290271
G WNT6 Wnt family member 6 JBrowse link 2 218,859,805 218,874,233 RGD:2290271
G WNT9B Wnt family member 9B JBrowse link 17 46,833,201 46,886,738 RGD:2290271
G WT1 WT1 transcription factor JBrowse link 11 32,387,775 32,435,539 RGD:2290271
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 5 142,592,178 142,698,070 RGD:2290271
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FOXD1 forkhead box D1 JBrowse link 5 73,446,266 73,448,777 RGD:2290271
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:2290271
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:2290271
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 1 58,575,433 58,577,252 RGD:2290271
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGT angiotensinogen JBrowse link 1 230,702,523 230,745,583 RGD:2290271
G AGTR1 angiotensin II receptor type 1 JBrowse link 3 148,697,871 148,743,003 RGD:9068941
G AGTR2 angiotensin II receptor type 2 JBrowse link X 116,170,744 116,174,974 RGD:2290271
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 5 37,812,677 37,840,044 RGD:2290271
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 32,718,004 32,745,106 RGD:2290271
G HOXB7 homeobox B7 JBrowse link 17 48,607,232 48,611,017 RGD:2290271
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link 11 27,365,961 27,472,790 RGD:2290271
G LHX1 LIM homeobox 1 JBrowse link 17 36,937,475 36,944,612 RGD:2290271
G MAGED1 MAGE family member D1 JBrowse link X 51,802,998 51,902,354 RGD:2290271
G NOG noggin JBrowse link 17 56,593,699 56,595,611 RGD:2290271
G PAX2 paired box 2 JBrowse link 10 100,735,396 100,829,944 RGD:2290271
G PAX8 paired box 8 JBrowse link 2 113,215,997 113,278,921 RGD:2290271
G SALL1 spalt like transcription factor 1 JBrowse link 16 51,135,975 51,151,270 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 14 60,643,421 60,649,489 RGD:2290271
G SIX4 SIX homeobox 4 JBrowse link 14 60,709,539 60,724,351 RGD:2290271
G SMO smoothened, frizzled class receptor JBrowse link 7 129,188,633 129,213,548 RGD:2290271
G SOX8 SRY-box transcription factor 8 JBrowse link 16 981,770 986,979 RGD:2290271
G SOX9 SRY-box transcription factor 9 JBrowse link 17 72,121,020 72,126,416 RGD:2290271
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:2290271
G VEGFA vascular endothelial growth factor A JBrowse link 6 43,770,209 43,786,487 RGD:2290271
G WNT2B Wnt family member 2B JBrowse link 1 112,466,541 112,530,165 RGD:2290271
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 17 37,686,431 37,745,059 RGD:2290271
G SIX1 SIX homeobox 1 JBrowse link 14 60,643,421 60,649,489 RGD:2290271
G SIX4 SIX homeobox 4 JBrowse link 14 60,709,539 60,724,351 RGD:2290271
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX2 SIX homeobox 2 JBrowse link 2 45,005,182 45,009,645 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    multicellular organismal process 8722
      morphogenesis of a branching structure 244
        morphogenesis of a branching epithelium 225
          branching morphogenesis of an epithelial tube 188
            branching involved in ureteric bud morphogenesis 66
              branch elongation involved in ureteric bud branching + 5
              canonical Wnt signaling pathway involved in ureteric bud branching 0
              dichotomous subdivision of terminal units involved in ureteric bud branching 1
              lateral sprouting involved in ureteric bud morphogenesis 0
              negative regulation of branching involved in ureteric bud morphogenesis + 2
              positive regulation of branching involved in ureteric bud morphogenesis 22
              regulation of branching involved in ureteric bud morphogenesis + 25
              trifid subdivision of terminal units involved in ureteric bud branching 0
Path 2
Term Annotations click to browse term
  biological_process 18539
    developmental process 7413
      anatomical structure development 6817
        multicellular organism development 6287
          system development 5703
            urogenital system development 429
              renal system development 379
                kidney development 366
                  nephron development 167
                    nephron epithelium development 125
                      nephron tubule development 105
                        nephron tubule morphogenesis 84
                          mesonephric tubule morphogenesis 75
                            ureteric bud morphogenesis 74
                              branching involved in ureteric bud morphogenesis 66
                                branch elongation involved in ureteric bud branching + 5
                                canonical Wnt signaling pathway involved in ureteric bud branching 0
                                dichotomous subdivision of terminal units involved in ureteric bud branching 1
                                lateral sprouting involved in ureteric bud morphogenesis 0
                                negative regulation of branching involved in ureteric bud morphogenesis + 2
                                positive regulation of branching involved in ureteric bud morphogenesis 22
                                regulation of branching involved in ureteric bud morphogenesis + 25
                                trifid subdivision of terminal units involved in ureteric bud branching 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.