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ONTOLOGY REPORT - ANNOTATIONS


Term:branching involved in ureteric bud morphogenesis
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Accession:GO:0001658 term browser browse the term
Definition:The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.
Synonyms:exact_synonym: ureteric bud branching


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branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts16 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 JBrowse link 13 70,727,798 70,841,845 RGD:2290270
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) JBrowse link 8 124,556,587 124,569,706 RGD:2290270
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:2290270
G Bmp2 bone morphogenetic protein 2 JBrowse link 2 133,552,159 133,562,896 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Cd44 CD44 antigen JBrowse link 2 102,811,141 102,901,669 RGD:2290270
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 JBrowse link X 102,247,378 102,252,181 RGD:2290270
RGD:9068941
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link 4 149,518,241 149,566,437 RGD:2290270
G Dchs1 dachsous cadherin related 1 JBrowse link 7 105,752,989 105,788,355 RGD:2290270
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 16 31,663,443 31,873,356 RGD:2290270
G Dspp dentin sialophosphoprotein JBrowse link 5 104,170,703 104,180,127 RGD:2290270
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 1 14,168,953 14,311,035 RGD:2290270
G Fat4 FAT atypical cadherin 4 JBrowse link 3 38,884,667 39,011,992 RGD:2290270
G Fgf2 fibroblast growth factor 2 JBrowse link 3 37,348,477 37,410,106 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,491 45,742,941 RGD:2290270
G Foxd1 forkhead box D1 JBrowse link 13 98,354,245 98,356,705 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Gli3 GLI-Kruppel family member GLI3 JBrowse link 13 15,463,723 15,730,026 RGD:2290270
G Gpc3 glypican 3 JBrowse link X 52,272,426 52,613,974 RGD:2290270
G Greb1l growth regulation by estrogen in breast cancer-like JBrowse link 18 10,324,933 10,562,945 RGD:2290270
G Gzf1 GDNF-inducible zinc finger protein 1 JBrowse link 2 148,679,384 148,692,949 RGD:2290270
G Hoxa11 homeobox A11 JBrowse link 6 52,242,105 52,245,810 RGD:2290270
G Hoxd11 homeobox D11 JBrowse link 2 74,679,558 74,687,016 RGD:2290270
G Ilk integrin linked kinase JBrowse link 7 105,736,590 105,742,925 RGD:2290270
G Lama5 laminin, alpha 5 JBrowse link 2 180,176,373 180,225,904 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,517,975 84,525,534 RGD:2290270
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:2290270
G Npnt nephronectin JBrowse link 3 132,881,745 132,950,291 RGD:2290270
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:2290270
G Pax8 paired box 8 JBrowse link 2 24,420,551 24,475,599 RGD:9068941
G Pbx1 pre B cell leukemia homeobox 1 JBrowse link 1 168,119,364 168,432,365 RGD:2290270
G Pgf placental growth factor JBrowse link 12 85,166,637 85,177,785 RGD:2290270
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link 5 104,453,982 104,505,819 RGD:9068941
G Pspn persephin JBrowse link 17 56,999,313 57,000,105 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,460 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Smad4 SMAD family member 4 JBrowse link 18 73,634,790 73,703,791 RGD:2290270
G Sox9 SRY (sex determining region Y)-box 9 JBrowse link 11 112,782,210 112,787,757 RGD:2290270
G Tcf21 transcription factor 21 JBrowse link 10 22,817,263 22,820,143 RGD:2290270
G Timeless timeless circadian clock 1 JBrowse link 10 128,232,063 128,252,941 RGD:2290270
G Wnt1 wingless-type MMTV integration site family, member 1 JBrowse link 15 98,789,857 98,793,830 RGD:2290270
G Wnt4 wingless-type MMTV integration site family, member 4 JBrowse link 4 137,277,635 137,299,501 RGD:2290270
G Wnt6 wingless-type MMTV integration site family, member 6 JBrowse link 1 74,754,342 74,785,322 RGD:2290270
G Wnt9b wingless-type MMTV integration site family, member 9B JBrowse link 11 103,727,362 103,775,272 RGD:2290270
G Wt1 Wilms tumor 1 homolog JBrowse link 2 105,126,529 105,173,614 RGD:2290270
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf1 fibroblast growth factor 1 JBrowse link 18 38,838,672 38,929,470 RGD:2290270
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxd1 forkhead box D1 JBrowse link 13 98,354,245 98,356,705 RGD:2290270
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Tacstd2 tumor-associated calcium signal transducer 2 JBrowse link 6 67,534,059 67,535,822 RGD:2290270
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) JBrowse link 8 124,556,587 124,569,706 RGD:2290270
G Agtr1a angiotensin II receptor, type 1a JBrowse link 13 30,336,356 30,382,867 RGD:2290270
G Agtr1b angiotensin II receptor, type 1b JBrowse link 3 20,314,473 20,367,177 RGD:2290270
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 21,484,624 21,488,833 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:2290270
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 2 113,748,675 113,758,648 RGD:2290270
G Hoxb7 homeobox B7 JBrowse link 11 96,285,604 96,290,163 RGD:2290270
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 JBrowse link 2 109,917,647 110,014,257 RGD:2290270
G Lhx1 LIM homeobox protein 1 JBrowse link 11 84,517,975 84,525,534 RGD:2290270
G Maged1 melanoma antigen, family D, 1 JBrowse link X 94,535,474 94,542,025 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:2290270
G Pax8 paired box 8 JBrowse link 2 24,420,551 24,475,599 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Six4 sine oculis-related homeobox 4 JBrowse link 12 73,099,609 73,114,031 RGD:2290270
G Smo smoothened, frizzled class receptor JBrowse link 6 29,735,497 29,761,366 RGD:2290270
G Sox8 SRY (sex determining region Y)-box 8 JBrowse link 17 25,565,893 25,570,686 RGD:2290270
G Sox9 SRY (sex determining region Y)-box 9 JBrowse link 11 112,782,210 112,787,757 RGD:2290270
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:2290270
G Vegfa vascular endothelial growth factor A JBrowse link 17 46,016,993 46,032,377 RGD:2290270
G Wnt2b wingless-type MMTV integration site family, member 2B JBrowse link 3 104,944,805 104,961,709 RGD:2290270
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1b HNF1 homeobox B JBrowse link 11 83,850,209 83,905,917 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Six4 sine oculis-related homeobox 4 JBrowse link 12 73,099,609 73,114,031 RGD:2290270
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Six2 sine oculis-related homeobox 2 JBrowse link 17 85,662,736 85,688,254 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23163
    multicellular organismal process 8818
      morphogenesis of a branching structure 247
        morphogenesis of a branching epithelium 228
          branching morphogenesis of an epithelial tube 191
            branching involved in ureteric bud morphogenesis 67
              branch elongation involved in ureteric bud branching + 5
              canonical Wnt signaling pathway involved in ureteric bud branching 0
              dichotomous subdivision of terminal units involved in ureteric bud branching 1
              lateral sprouting involved in ureteric bud morphogenesis 0
              negative regulation of branching involved in ureteric bud morphogenesis + 2
              positive regulation of branching involved in ureteric bud morphogenesis 23
              regulation of branching involved in ureteric bud morphogenesis + 26
              trifid subdivision of terminal units involved in ureteric bud branching 0
Path 2
Term Annotations click to browse term
  biological_process 23163
    developmental process 6947
      anatomical structure development 6420
        multicellular organism development 5888
          system development 5326
            urogenital system development 435
              renal system development 386
                kidney development 372
                  nephron development 166
                    nephron epithelium development 124
                      nephron tubule development 105
                        nephron tubule morphogenesis 85
                          mesonephric tubule morphogenesis 76
                            ureteric bud morphogenesis 75
                              branching involved in ureteric bud morphogenesis 67
                                branch elongation involved in ureteric bud branching + 5
                                canonical Wnt signaling pathway involved in ureteric bud branching 0
                                dichotomous subdivision of terminal units involved in ureteric bud branching 1
                                lateral sprouting involved in ureteric bud morphogenesis 0
                                negative regulation of branching involved in ureteric bud morphogenesis + 2
                                positive regulation of branching involved in ureteric bud morphogenesis 23
                                regulation of branching involved in ureteric bud morphogenesis + 26
                                trifid subdivision of terminal units involved in ureteric bud branching 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.