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ONTOLOGY REPORT - ANNOTATIONS


Term:branching involved in ureteric bud morphogenesis
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Accession:GO:0001658 term browser browse the term
Definition:The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.
Synonyms:exact_synonym: ureteric bud branching


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branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 JBrowse link 16 76,326,718 76,491,050 RGD:14298760
G AGT angiotensinogen JBrowse link 14 59,643,030 59,656,835 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 1 158,337,403 158,518,214 RGD:9068941
G BMP2 bone morphogenetic protein 2 JBrowse link 17 15,750,487 15,762,982 RGD:14298760
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:14298760
G CD44 CD44 molecule JBrowse link 2 25,788,699 25,884,209 RGD:9068941
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 58,179,084 58,184,778 RGD:9068941
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 1 25,155,652 25,158,517 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 13 25,163,550 25,208,314 RGD:9068941
G CTNNBIP1 catenin beta interacting protein 1 JBrowse link 6 70,184,935 70,241,560 RGD:14298760
G DCHS1 dachsous cadherin-related 1 JBrowse link 9 3,099,525 3,134,825 RGD:14298760
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 13 132,819,931 133,084,880 RGD:14298760
G DSPP dentin sialophosphoprotein JBrowse link 8 131,318,187 131,444,274 RGD:9068941
G EYA1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 4 63,970,939 64,328,107 RGD:14298760
G FAT4 FAT atypical cadherin 4 JBrowse link 8 99,141,967 99,312,131 RGD:9068941
G FGF2 fibroblast growth factor 2 JBrowse link 8 101,278,877 101,344,084 RGD:9068941
G FGF8 fibroblast growth factor 8 JBrowse link 14 112,808,215 112,814,225 RGD:9068941
G FOXD1 forkhead box D1 JBrowse link 2 82,607,113 82,612,005 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 16 22,936,602 22,965,929 RGD:14298760
G GLI3 GLI family zinc finger 3 JBrowse link 18 52,403,463 52,697,906 RGD:14298760
G GPC3 glypican 3 JBrowse link X 109,536,495 109,973,605 RGD:14298760
G GREB1L GREB1 like retinoic acid receptor coactivator JBrowse link 6 106,545,882 106,693,711 RGD:14298760
G GZF1 GDNF inducible zinc finger protein 1 JBrowse link 17 30,351,433 30,360,245 RGD:9068941
G HOXA11 homeobox A11 JBrowse link 18 45,388,523 45,392,190 RGD:14298760
G HOXD11 homeobox D11 JBrowse link 15 81,906,654 81,910,765 RGD:9068941
G ILK integrin linked kinase JBrowse link 9 3,145,647 3,152,097 RGD:14298760
G LAMA5 laminin subunit alpha 5 JBrowse link 17 61,698,370 61,747,795 RGD:9068941
G LHX1 LIM homeobox 1 JBrowse link 12 38,450,708 38,457,583 RGD:14298760
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 4 12,455,141 12,460,360 RGD:9068941
G NPNT nephronectin JBrowse link 8 115,768,963 115,861,170 RGD:9068941
G PAX2 paired box 2 JBrowse link 14 111,822,334 111,914,950 RGD:14298760
G PBX1 PBX homeobox 1 JBrowse link 4 85,824,590 86,170,328 RGD:9068941
G PGF placental growth factor JBrowse link 7 98,149,510 98,162,784 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 8 131,002,973 131,058,932 RGD:14298760
G PSPN persephin JBrowse link 2 72,698,413 72,701,974 RGD:9068941
G PTCH1 patched 1 JBrowse link 10 26,627,165 26,703,225 RGD:14298760
G SALL1 spalt like transcription factor 1 JBrowse link 6 33,731,666 33,748,698 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 18 2,546,202 2,555,484 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SMAD4 SMAD family member 4 JBrowse link 1 100,521,843 100,633,501 RGD:14298760
G SOX9 SRY-box transcription factor 9 JBrowse link 12 8,642,154 8,647,315 RGD:14298760
G TCF21 transcription factor 21 JBrowse link 1 29,975,280 29,978,273 RGD:14298760
G WNT1 Wnt family member 1 JBrowse link 5 15,010,607 15,015,007 RGD:14298760
G WNT4 Wnt family member 4 JBrowse link 6 80,110,238 80,138,165 RGD:9068941
G WNT6 Wnt family member 6 JBrowse link 15 120,901,471 120,917,359 RGD:14298760
G WNT9B Wnt family member 9B JBrowse link 12 17,709,046 17,733,434 RGD:14298760
G WT1 WT1 transcription factor JBrowse link 2 28,411,467 28,456,007 RGD:14298760
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FGF1 fibroblast growth factor 1 JBrowse link 2 144,133,846 144,241,345 RGD:14298760
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FOXD1 forkhead box D1 JBrowse link 2 82,607,113 82,612,005 RGD:14298760
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:14298760
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:9068941
G TACSTD2 tumor associated calcium signal transducer 2 JBrowse link 6 153,859,488 153,861,508 RGD:14298760
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGT angiotensinogen JBrowse link 14 59,643,030 59,656,835 RGD:14298760
G AGTR1 angiotensin II receptor type 1 JBrowse link 13 88,934,873 88,980,317 RGD:9068941
G AGTR2 angiotensin II receptor type 2 JBrowse link X 95,267,709 95,272,237 RGD:14298760
G BMP4 bone morphogenetic protein 4 JBrowse link 1 183,415,989 183,422,888 RGD:9068941
G GDNF glial cell derived neurotrophic factor JBrowse link 16 22,936,602 22,965,929 RGD:14298760
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 1 136,617,041 136,629,293 RGD:14298760
G HOXB7 homeobox B7 JBrowse link 12 24,861,165 24,864,675 RGD:14298760
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link 2 32,871,837 32,979,150 RGD:14298760
G LHX1 LIM homeobox 1 JBrowse link 12 38,450,708 38,457,583 RGD:14298760
G MAGED1 MAGE family member D1 JBrowse link X 45,258,761 45,329,282 RGD:9068941
G NOG noggin JBrowse link 12 32,891,321 32,892,206 RGD:14298760
G PAX2 paired box 2 JBrowse link 14 111,822,334 111,914,950 RGD:9068941
G SALL1 spalt like transcription factor 1 JBrowse link 6 33,731,666 33,748,698 RGD:9068941
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SIX4 SIX homeobox 4 JBrowse link 1 189,670,390 189,682,378 RGD:14298760
G SMO smoothened, frizzled class receptor JBrowse link 18 19,450,730 19,478,796 RGD:14298760
G SOX8 SRY-box transcription factor 8 JBrowse link 3 40,825,151 40,830,085 RGD:14298760
G SOX9 SRY-box transcription factor 9 JBrowse link 12 8,642,154 8,647,315 RGD:14298760
G TGFB1 transforming growth factor beta 1 JBrowse link 6 49,332,169 49,348,642 RGD:9068941
G VEGFA vascular endothelial growth factor A JBrowse link 7 38,746,393 38,762,282 RGD:9068941
G WNT2B Wnt family member 2B JBrowse link 4 107,906,141 107,923,343 RGD:14298760
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1B HNF1 homeobox B JBrowse link 12 39,143,119 39,201,631 RGD:14298760
G SIX1 SIX homeobox 1 JBrowse link 1 189,620,430 189,624,652 RGD:14298760
G SIX4 SIX homeobox 4 JBrowse link 1 189,670,390 189,682,378 RGD:14298760
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX2 SIX homeobox 2 JBrowse link 3 95,460,046 95,463,428 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16412
    multicellular organismal process 7967
      morphogenesis of a branching structure 242
        morphogenesis of a branching epithelium 223
          branching morphogenesis of an epithelial tube 186
            branching involved in ureteric bud morphogenesis 64
              branch elongation involved in ureteric bud branching + 5
              canonical Wnt signaling pathway involved in ureteric bud branching 0
              dichotomous subdivision of terminal units involved in ureteric bud branching 1
              lateral sprouting involved in ureteric bud morphogenesis 0
              negative regulation of branching involved in ureteric bud morphogenesis + 2
              positive regulation of branching involved in ureteric bud morphogenesis 21
              regulation of branching involved in ureteric bud morphogenesis + 24
              trifid subdivision of terminal units involved in ureteric bud branching 0
Path 2
Term Annotations click to browse term
  biological_process 16412
    developmental process 6233
      anatomical structure development 5774
        multicellular organism development 5261
          system development 4908
            urogenital system development 421
              renal system development 371
                kidney development 358
                  nephron development 165
                    nephron epithelium development 123
                      nephron tubule development 104
                        nephron tubule morphogenesis 82
                          mesonephric tubule morphogenesis 73
                            ureteric bud morphogenesis 72
                              branching involved in ureteric bud morphogenesis 64
                                branch elongation involved in ureteric bud branching + 5
                                canonical Wnt signaling pathway involved in ureteric bud branching 0
                                dichotomous subdivision of terminal units involved in ureteric bud branching 1
                                lateral sprouting involved in ureteric bud morphogenesis 0
                                negative regulation of branching involved in ureteric bud morphogenesis + 2
                                positive regulation of branching involved in ureteric bud morphogenesis 21
                                regulation of branching involved in ureteric bud morphogenesis + 24
                                trifid subdivision of terminal units involved in ureteric bud branching 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.