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ONTOLOGY REPORT - ANNOTATIONS


Term:branching involved in ureteric bud morphogenesis
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Accession:GO:0001658 term browser browse the term
Definition:The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.
Synonyms:exact_synonym: ureteric bud branching


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branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 JBrowse link NW_004936634 1,830,252 1,925,622 RGD:9068941
G Agt angiotensinogen JBrowse link NW_004936484 19,713,299 19,721,144 RGD:9068941
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004936497 2,209,136 2,373,580 RGD:9068941
G Bmp2 bone morphogenetic protein 2 JBrowse link NW_004936485 12,428,765 12,439,570 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004936697 1,054,237 1,061,468 RGD:9068941
G Cd44 CD44 molecule (Indian blood group) JBrowse link NW_004936533 2,949,026 3,033,166 RGD:9068941
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link NW_004936762 1,387,354 1,392,955 RGD:9068941
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link NW_004936560 6,353,901 6,356,749 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004936473 29,999,542 30,034,610 RGD:9068941
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link NW_004936623 3,782,005 3,806,616 RGD:9068941
G Dchs1 dachsous cadherin-related 1 JBrowse link NW_004936842 677,416 697,013 RGD:9068941
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link NW_004936833 551,989 843,064 RGD:9068941
G Dspp dentin sialophosphoprotein JBrowse link NW_004936905 458,062 463,359 RGD:9068941
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link NW_004936648 395,526 546,705 RGD:9068941
G Fat4 FAT atypical cadherin 4 JBrowse link NW_004936662 3,537,917 3,704,012 RGD:9068941
G Fgf2 fibroblast growth factor 2 JBrowse link NW_004936662 1,886,176 1,928,998 RGD:9068941
G Fgf8 fibroblast growth factor 8 JBrowse link NW_004936600 4,004,847 4,010,626 RGD:9068941
G Gdnf glial cell derived neurotrophic factor JBrowse link NW_004936518 4,291,391 4,310,752 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004936478 17,129,922 17,403,630 RGD:9068941
G Gpc3 glypican 3 JBrowse link NW_004936691 1,060,013 1,459,736 RGD:9068941
G Greb1l GREB1 like retinoic acid receptor coactivator JBrowse link NW_004936550 1,110,679 1,240,463 RGD:9068941
G Gzf1 GDNF inducible zinc finger protein 1 JBrowse link NW_004936620 2,208,185 2,223,651 RGD:9068941
G Hoxa11 homeobox A11 JBrowse link NW_004936478 3,809,288 3,813,014 RGD:9068941
G Ilk integrin linked kinase JBrowse link NW_004936842 661,961 667,993 RGD:9068941
G Lama5 laminin subunit alpha 5 JBrowse link NW_004936514 9,928,234 9,973,425 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004936490 1,324,378 1,332,177 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004936470 20,480,844 20,485,955 RGD:9068941
G Npnt nephronectin JBrowse link NW_004936814 1,096,604 1,165,755 RGD:9068941
G Pax2 paired box 2 JBrowse link NW_004936600 4,850,594 4,939,010 RGD:9068941
G Pax8 paired box 8 JBrowse link NW_004936783 1,523,658 1,553,464 RGD:9068941
G Pbx1 PBX homeobox 1 JBrowse link NW_004936481 20,200,236 20,440,623 RGD:9068941
G Pgf placental growth factor JBrowse link NW_004936488 4,098,187 4,111,108 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004936905 76,781 128,995 RGD:9068941
G Pspn persephin JBrowse link NW_004936588 3,734,821 3,735,766 RGD:9068941
G Ptch1 patched 1 JBrowse link NW_004936626 4,241,993 4,301,919 RGD:9068941
G Sall1 spalt like transcription factor 1 JBrowse link NW_004936475 4,106,663 4,121,356 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004936527 10,033,095 10,042,713 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004936495 4,839,496 4,842,906 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004936497 12,242,869 12,278,012 RGD:9068941
G Sox9 SRY-box transcription factor 9 JBrowse link NW_004936655 1,849,044 1,852,648 RGD:9068941
G Tcf21 transcription factor 21 JBrowse link NW_004936560 1,733,903 1,736,895 RGD:9068941
G Timeless timeless circadian regulator JBrowse link NW_004936646 780,021 792,856 RGD:9068941
G Wnt1 Wnt family member 1 JBrowse link NW_004936512 6,781,001 6,785,358 RGD:9068941
G Wnt4 Wnt family member 4 JBrowse link NW_004936474 7,623,462 7,635,416 RGD:9068941
G Wnt6 Wnt family member 6 JBrowse link NW_004936569 1,290,061 1,302,672 RGD:9068941
G Wnt9b Wnt family member 9B JBrowse link NW_004936541 1,899,039 1,939,561 RGD:9068941
G Wt1 WT1 transcription factor JBrowse link NW_004936533 5,411,949 5,459,693 RGD:9068941
branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf1 fibroblast growth factor 1 JBrowse link NW_004936504 11,590,687 11,684,410 RGD:9068941
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004936697 1,054,237 1,061,468 RGD:9068941
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004936697 1,054,237 1,061,468 RGD:9068941
G Tacstd2 tumor associated calcium signal transducer 2 JBrowse link NW_004936522 3,206,826 3,208,675 RGD:9068941
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen JBrowse link NW_004936484 19,713,299 19,721,144 RGD:9068941
G Agtr1 angiotensin II receptor type 1 JBrowse link NW_004936519 6,831,096 6,873,977 RGD:9068941
G Agtr2 angiotensin II receptor type 2 JBrowse link NW_004936479 13,252,678 13,255,570 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004936697 1,054,237 1,061,468 RGD:9068941
G Gdnf glial cell derived neurotrophic factor JBrowse link NW_004936518 4,291,391 4,310,752 RGD:9068941
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link NW_004936673 1,394,743 1,399,726 RGD:9068941
G Hoxb7 homeobox B7 JBrowse link NW_004936490 12,777,005 12,780,515 RGD:9068941
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 JBrowse link NW_004936540 5,752,319 5,846,074 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004936490 1,324,378 1,332,177 RGD:9068941
G Maged1 MAGE family member D1 JBrowse link NW_004936909 493,998 592,649 RGD:9068941
G Nog noggin JBrowse link NW_004936490 6,262,651 6,264,069 RGD:9068941
G Pax2 paired box 2 JBrowse link NW_004936600 4,850,594 4,939,010 RGD:9068941
G Pax8 paired box 8 JBrowse link NW_004936783 1,523,658 1,553,464 RGD:9068941
G Sall1 spalt like transcription factor 1 JBrowse link NW_004936475 4,106,663 4,121,356 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004936495 4,839,496 4,842,906 RGD:9068941
G Six4 SIX homeobox 4 JBrowse link NW_004936495 4,887,718 4,900,198 RGD:9068941
G Smo smoothened, frizzled class receptor JBrowse link NW_004936579 5,893,064 5,917,021 RGD:9068941
G Sox8 SRY-box transcription factor 8 JBrowse link NW_004936501 128,386 132,648 RGD:9068941
G Sox9 SRY-box transcription factor 9 JBrowse link NW_004936655 1,849,044 1,852,648 RGD:9068941
G Tgfb1 transforming growth factor beta 1 JBrowse link NW_004936661 3,742,080 3,758,266 RGD:9068941
G Vegfa vascular endothelial growth factor A JBrowse link NW_004936476 16,245,134 16,261,180 RGD:9068941
G Wnt2b Wnt family member 2B JBrowse link NW_004936690 1,077,538 1,094,005 RGD:9068941
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1b HNF1 homeobox B JBrowse link NW_004936490 649,551 702,448 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004936495 4,839,496 4,842,906 RGD:9068941
G Six4 SIX homeobox 4 JBrowse link NW_004936495 4,887,718 4,900,198 RGD:9068941
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Six2 SIX homeobox 2 JBrowse link NW_004936508 7,047,563 7,051,129 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11930
    multicellular organismal process 6174
      morphogenesis of a branching structure 239
        morphogenesis of a branching epithelium 220
          branching morphogenesis of an epithelial tube 185
            branching involved in ureteric bud morphogenesis 64
              branch elongation involved in ureteric bud branching + 5
              canonical Wnt signaling pathway involved in ureteric bud branching 0
              dichotomous subdivision of terminal units involved in ureteric bud branching 0
              lateral sprouting involved in ureteric bud morphogenesis 0
              negative regulation of branching involved in ureteric bud morphogenesis + 2
              positive regulation of branching involved in ureteric bud morphogenesis 22
              regulation of branching involved in ureteric bud morphogenesis + 25
              trifid subdivision of terminal units involved in ureteric bud branching 0
Path 2
Term Annotations click to browse term
  biological_process 11930
    developmental process 5576
      anatomical structure development 5218
        multicellular organism development 4786
          system development 4532
            urogenital system development 402
              renal system development 357
                kidney development 343
                  nephron development 160
                    nephron epithelium development 119
                      nephron tubule development 101
                        nephron tubule morphogenesis 82
                          mesonephric tubule morphogenesis 73
                            ureteric bud morphogenesis 72
                              branching involved in ureteric bud morphogenesis 64
                                branch elongation involved in ureteric bud branching + 5
                                canonical Wnt signaling pathway involved in ureteric bud branching 0
                                dichotomous subdivision of terminal units involved in ureteric bud branching 0
                                lateral sprouting involved in ureteric bud morphogenesis 0
                                negative regulation of branching involved in ureteric bud morphogenesis + 2
                                positive regulation of branching involved in ureteric bud morphogenesis 22
                                regulation of branching involved in ureteric bud morphogenesis + 25
                                trifid subdivision of terminal units involved in ureteric bud branching 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.