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ONTOLOGY REPORT - ANNOTATIONS


Term:gastrulation with mouth forming second
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Accession:GO:0001702 term browser browse the term
Definition:A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.
Synonyms:exact_synonym: deuterostomic gastrulation
 alt_id: GO:0010003;   GO:0048276
 only_in_taxon: NCBITaxon:33511 ! Deuterostomia


show annotations for term's descendants       view all columns           Sort by:
 
gastrulation with mouth forming second term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07034833.1 RGD:13792537
G AABR07071701.1 RGD:13792537
G Acvr1 activin A receptor type 1 JBrowse link 3 44,432,476 44,539,680 RGD:1624291
RGD:1600115
G Acvr2a activin A receptor type 2A JBrowse link 3 32,947,901 33,034,598 RGD:1624291
RGD:1600115
G Acvr2b activin A receptor type 2B JBrowse link 8 128,087,308 128,126,776 RGD:1624291
RGD:1600115
G Amot angiomotin JBrowse link X 116,751,231 116,810,238 RGD:1624291
G Chrd chordin JBrowse link 11 83,858,503 83,867,543 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Dact1 dishevelled-binding antagonist of beta-catenin 1 JBrowse link 6 93,740,440 93,751,003 RGD:1624291
G Frs2 fibroblast growth factor receptor substrate 2 JBrowse link 7 60,128,506 60,210,482 RGD:1624291
G Gata4 GATA binding protein 4 JBrowse link 15 46,386,703 46,458,679 RGD:1624291
G Ldb1 LIM domain binding 1 JBrowse link 1 265,772,729 265,798,442 RGD:1624291
G Lhx1 LIM homeobox 1 JBrowse link 10 71,843,991 71,849,293 RGD:1624291
RGD:1600115
G LOC102554748 nidogen-2-like JBrowse link 7 380,313 427,615 RGD:13792537
G LOC103690139 probable N-acetyltransferase CML6 JBrowse link 4 117,788,998 117,793,806 RGD:632468
G Lrp5 LDL receptor related protein 5 JBrowse link 1 218,816,833 218,920,147 RGD:1624291
RGD:13792537
G Lrp6 LDL receptor related protein 6 JBrowse link 4 168,194,054 168,323,962 RGD:1624291
RGD:13792537
G Nat8 N-acetyltransferase 8 JBrowse link 4 117,525,963 117,527,443 RGD:1624291
RGD:1600115
G Nat8b N-acetyltransferase 8B JBrowse link 4 117,606,022 117,607,366 RGD:632468
G Nat8f1 N-acetyltransferase 8 (GCN5-related) family member 1 JBrowse link 4 117,582,779 117,589,464 RGD:632468
G Nat8f3 N-acetyltransferase 8 (GCN5-related) family member 3 JBrowse link 4 117,488,089 117,492,315 RGD:632468
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 JBrowse link 4 117,506,731 117,531,480 RGD:632468
G Nodal nodal growth differentiation factor JBrowse link 20 31,035,729 31,044,096 RGD:1624291
G Nsd1 nuclear receptor binding SET domain protein 1 JBrowse link 17 9,840,859 9,955,391 RGD:1624291
G Plpp3 phospholipid phosphatase 3 JBrowse link 5 124,690,214 124,765,499 RGD:1624291
RGD:1600115
G Rnf2 ring finger protein 2 JBrowse link 13 68,829,714 68,859,920 RGD:1624291
RGD:1600115
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:1624291
RGD:1600115
G Tenm4 teneurin transmembrane protein 4 JBrowse link 1 161,183,858 161,885,094 RGD:1624291
G Ugdh UDP-glucose 6-dehydrogenase JBrowse link 14 44,479,614 44,502,845 RGD:1600115
RGD:1624291
G Zbtb17 zinc finger and BTB domain containing 17 JBrowse link 5 159,993,799 160,014,899 RGD:1624291
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Megf8 multiple EGF-like-domains 8 JBrowse link 1 82,184,671 82,234,045 RGD:1600115
RGD:1624291
ingression involved in gastrulation with mouth forming second term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crb2 crumbs cell polarity complex component 2 JBrowse link 3 22,037,812 22,061,247 RGD:1624291
primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ets2 ETS proto-oncogene 2, transcription factor JBrowse link 11 36,075,709 36,092,495 RGD:1624291
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
RGD:1600115
G Gdf3 growth differentiation factor 3 JBrowse link 4 155,417,667 155,422,014 RGD:1624291
G Hhex hematopoietically expressed homeobox JBrowse link 1 256,101,994 256,107,581 RGD:1624291
G Lhx1 LIM homeobox 1 JBrowse link 10 71,843,991 71,849,293 RGD:1624291
RGD:1600115
G Lrp6 LDL receptor related protein 6 JBrowse link 4 168,194,054 168,323,962 RGD:1624291
RGD:13792537
G Nodal nodal growth differentiation factor JBrowse link 20 31,035,729 31,044,096 RGD:1624291
G Otx2 orthodenticle homeobox 2 JBrowse link 15 25,500,037 25,511,619 RGD:1624291
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:1624291
RGD:1600115
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nodal nodal growth differentiation factor JBrowse link 20 31,035,729 31,044,096 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19336
    developmental process 6638
      anatomical structure morphogenesis 2821
        embryonic morphogenesis 683
          gastrulation 204
            gastrulation with mouth forming second 39
              delamination involved in gastrulation with mouth forming second 0
              epiboly involved in gastrulation with mouth forming second + 1
              ingression involved in gastrulation with mouth forming second 1
              invagination involved in gastrulation with mouth forming second 0
              involution involved in gastrulation with mouth forming second 0
              primitive streak formation + 10
Path 2
Term Annotations click to browse term
  biological_process 19336
    developmental process 6638
      anatomical structure development 6107
        multicellular organism development 5579
          embryo development 1300
            embryonic morphogenesis 683
              gastrulation 204
                gastrulation with mouth forming second 39
                  delamination involved in gastrulation with mouth forming second 0
                  epiboly involved in gastrulation with mouth forming second + 1
                  ingression involved in gastrulation with mouth forming second 1
                  invagination involved in gastrulation with mouth forming second 0
                  involution involved in gastrulation with mouth forming second 0
                  primitive streak formation + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.