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ONTOLOGY REPORT - ANNOTATIONS


Term:gastrulation with mouth forming second
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Accession:GO:0001702 term browser browse the term
Definition:A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.
Synonyms:exact_synonym: deuterostomic gastrulation
 alt_id: GO:0010003;   GO:0048276
 only_in_taxon: NCBITaxon:33511 ! Deuterostomia


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gastrulation with mouth forming second term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR2B activin A receptor type 2B JBrowse link 23 8,211,555 8,225,596 RGD:13508589
G AMOT angiomotin JBrowse link X 85,742,610 85,807,557 RGD:13508589
G CHRD chordin JBrowse link 34 17,255,770 17,264,776 RGD:13508589
G CTNNB1 catenin beta 1 JBrowse link 23 10,559,722 10,572,933 RGD:13508589
G FRS2 fibroblast growth factor receptor substrate 2 JBrowse link 10 11,445,843 11,552,325 RGD:13508589
G LDB1 LIM domain binding 1 JBrowse link 28 14,646,409 14,658,324 RGD:13508589
G LHX1 LIM homeobox 1 JBrowse link 9 36,760,890 36,768,345 RGD:13508589
G LRP5 LDL receptor related protein 5 JBrowse link 18 49,439,494 49,555,375 RGD:13508589
G LRP6 LDL receptor related protein 6 JBrowse link 27 34,003,334 34,166,334 RGD:13508589
G RNF2 ring finger protein 2 JBrowse link 7 18,240,672 18,283,091 RGD:13508589
G SMAD4 SMAD family member 4 JBrowse link 1 23,875,989 23,930,027 RGD:13508589
G UGDH UDP-glucose 6-dehydrogenase JBrowse link 3 72,935,532 72,964,151 RGD:13508589
G ZBTB17 zinc finger and BTB domain containing 17 JBrowse link 2 81,652,015 81,682,647 RGD:13508589
primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ETS2 ETS proto-oncogene 2, transcription factor JBrowse link 31 33,846,821 33,861,394 RGD:13508589
G FOXA2 forkhead box A2 JBrowse link 24 1,010,370 1,013,791 RGD:13508589
G GDF3 growth differentiation factor 3 JBrowse link 27 37,125,845 37,129,567 RGD:13508589
G LHX1 LIM homeobox 1 JBrowse link 9 36,760,890 36,768,345 RGD:13508589
G LRP6 LDL receptor related protein 6 JBrowse link 27 34,003,334 34,166,334 RGD:13508589
G OTX2 orthodenticle homeobox 2 JBrowse link 8 32,435,169 32,445,093 RGD:13508589
G SRF serum response factor JBrowse link 12 11,664,441 11,673,846 RGD:13508589
G WNT5A Wnt family member 5A JBrowse link 20 34,756,430 34,790,937 RGD:13508589
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NODAL nodal growth differentiation factor JBrowse link 4 21,366,828 21,374,623 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13645
    developmental process 3739
      anatomical structure morphogenesis 1692
        embryonic morphogenesis 399
          gastrulation 112
            gastrulation with mouth forming second 20
              delamination involved in gastrulation with mouth forming second 0
              epiboly involved in gastrulation with mouth forming second + 0
              ingression involved in gastrulation with mouth forming second 0
              invagination involved in gastrulation with mouth forming second 0
              involution involved in gastrulation with mouth forming second 0
              primitive streak formation + 9
Path 2
Term Annotations click to browse term
  biological_process 13645
    developmental process 3739
      anatomical structure development 3455
        multicellular organism development 3068
          embryo development 680
            embryonic morphogenesis 399
              gastrulation 112
                gastrulation with mouth forming second 20
                  delamination involved in gastrulation with mouth forming second 0
                  epiboly involved in gastrulation with mouth forming second + 0
                  ingression involved in gastrulation with mouth forming second 0
                  invagination involved in gastrulation with mouth forming second 0
                  involution involved in gastrulation with mouth forming second 0
                  primitive streak formation + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.