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ONTOLOGY REPORT - ANNOTATIONS


Term:formation of primary germ layer
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Accession:GO:0001704 term browser browse the term
Definition:The formation of the ectoderm, mesoderm and endoderm during gastrulation.


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formation of primary germ layer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO MGI:3796520 (MGI:3789431|PMID:18448678) RGD PMID:18448678 MGI:3789431 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 ISO (MGI:3798332|PMID:18560595) RGD PMID:18560595 MGI:3798332 NCBI chr 4:100,067,341...100,099,517
Ensembl chr 4:100,067,341...100,099,517
JBrowse link
G Kif16b kinesin family member 16B ISO (MGI:4889011|PMID:21238925) RGD PMID:21238925 MGI:4889011 NCBI chr 3:136,596,621...136,936,809
Ensembl chr 3:136,657,480...136,936,674
JBrowse link
axial mesoderm formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 ISO MGI:1857546 (MGI:894149|PMID:9230313) RGD PMID:9230313 MGI:894149
G Epha2 Eph receptor A2 ISO MGI:2448472 (MGI:1934524|PMID:11287184) RGD PMID:11287184 MGI:1934524 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor ISO (MGI:2677178|PMID:14511481) RGD PMID:14511481 MGI:2677178 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
BMP signaling pathway involved in mesodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etv2 ETS variant transcription factor 2 ISO (MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:4415813 NCBI chr 1:89,091,239...89,094,570
Ensembl chr 1:89,091,239...89,094,530
JBrowse link
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
ectoderm formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO MGI:99783 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO
GO_REF:0000024
MGI:1347476 (MGI:1344734|PMID:10498685)
UniProt
RGD
PMID:10498685 GO_REF:0000024, MGI:1344734 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
ectodermal cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 ISO MGI:95456 (MGI:5616945|PMID:25446535) RGD PMID:25446535 MGI:5616945 NCBI chr 3:93,333,514...93,374,454
Ensembl chr 3:93,351,619...93,371,656
JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor ISO MGI:1335079 (MGI:5616945|PMID:25446535) RGD PMID:25446535 MGI:5616945 NCBI chr11:36,075,709...36,092,495
Ensembl chr11:36,075,709...36,092,495
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:1355046|PMID:10742100) RGD PMID:10742100 MGI:1355046 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
endoderm formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO MGI:1858007|MGI:2148567|MGI:4418897 (MGI:3625553|PMID:12194849), (MGI:5498579|PMID:23824574) RGD PMID:12194849, PMID:23824574 MGI:3625553, MGI:5498579 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:4415813 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Dusp1 dual specificity phosphatase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:16,970,642...16,973,425
Ensembl chr10:16,970,626...16,973,418
JBrowse link
G Dusp2 dual specificity phosphatase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:119,776,925...119,779,110
Ensembl chr 3:119,776,925...119,779,099
JBrowse link
G Dusp4 dual specificity phosphatase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:61,080,767...61,090,973
Ensembl chr16:61,078,175...61,091,169
JBrowse link
G Dusp5 dual specificity phosphatase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:274,245,184...274,258,595
Ensembl chr 1:274,245,184...274,258,595
JBrowse link
G Eomes eomesodermin ISO MGI:3774028 (MGI:3772748|PMID:18171685), (MGI:4887279|PMID:21245162), (MGI:5293253|PMID:21822279) RGD PMID:18171685, PMID:21245162, PMID:21822279 MGI:3772748, MGI:4887279, MGI:5293253 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Gata4 GATA binding protein 4 ISO MGI:2179511 (MGI:77407|PMID:8582296) RGD PMID:8582296 MGI:77407 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO
GO_REF:0000024
MGI:1857848 (MGI:3487194|PMID:15355796)
UniProt
RGD
PMID:15355796 GO_REF:0000024, MGI:3487194 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Mixl1 Mix paired-like homeobox 1 ISO MGI:2387829 (MGI:3695524|PMID:17151016) RGD PMID:17151016 MGI:3695524 NCBI chr13:97,278,258...97,282,299
Ensembl chr13:98,973,041...98,975,426
Ensembl chr13:98,973,041...98,975,426
JBrowse link
G Nog noggin IEA
ISO
GO_REF:0000107
(MGI:4415813|PMID:18462699)
Ensembl
RGD
PMID:18462699 GO_REF:0000107, MGI:4415813 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Smad2 SMAD family member 2 ISO (MGI:5293253|PMID:21822279) RGD PMID:21822279 MGI:5293253 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (PMID:18682240) RGD PMID:18682240 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Sox7 SRY-box transcription factor 7 ISO (PMID:18682240) RGD PMID:18682240 NCBI chr15:47,293,699...47,300,460
Ensembl chr15:47,293,699...47,300,460
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C ISO MGI:4124681 (MGI:5315650|PMID:22187428) RGD PMID:22187428 MGI:5315650 NCBI chr10:106,698,359...106,763,639
Ensembl chr10:106,712,127...106,762,043
JBrowse link
endodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col12a1 collagen type XII alpha 1 chain IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:23154389)
Ensembl
RGD
PMID:23154389, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:87,042,820...87,150,701
Ensembl chr 8:87,040,799...87,158,368
JBrowse link
G Col4a2 collagen type IV alpha 2 chain ISO (PMID:23154389) RGD PMID:23154389 NCBI chr16:83,386,388...83,522,169
Ensembl chr16:83,387,364...83,438,561
JBrowse link
G Col6a1 collagen type VI alpha 1 chain ISO (PMID:23154389) RGD PMID:23154389 NCBI chr20:12,657,913...12,676,370
Ensembl chr20:12,658,065...12,675,561
JBrowse link
G Col7a1 collagen type VII alpha 1 chain ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 8:117,694,441...117,726,844
Ensembl chr 8:117,694,605...117,726,844
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain ISO (PMID:23154389) RGD PMID:23154389 NCBI chr11:44,877,690...45,006,203
Ensembl chr11:44,877,859...45,007,891
JBrowse link
G Fn1 fibronectin 1 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Gata6 GATA binding protein 6 ISO MGI:2177785 (MGI:1315079|PMID:9832509) RGD PMID:9832509 MGI:1315079 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:17624332)
GO_REF:0000024
RGD
UniProt
PMID:17624332 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hsbp1 heat shock factor binding protein 1 ISO (MGI:5553204|PMID:24380799) RGD PMID:24380799 MGI:5553204 NCBI chr19:51,985,196...51,989,528
Ensembl chr19:51,985,170...51,989,544
JBrowse link
G Inhba inhibin subunit beta A ISO (PMID:21828274) RGD PMID:21828274 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496
JBrowse link
G Itga4 integrin subunit alpha 4 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Itga5 integrin subunit alpha 5 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itga7 integrin subunit alpha 7 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 7:3,355,079...3,383,886
Ensembl chr 7:3,355,116...3,384,675
JBrowse link
G Itgav integrin subunit alpha V ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb2 integrin subunit beta 2 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G Itgb5 integrin subunit beta 5 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr11:70,056,500...70,172,164
Ensembl chr11:70,056,500...70,172,372
JBrowse link
G Lama3 laminin subunit alpha 3 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr18:3,704,866...3,941,215
Ensembl chr18:3,705,916...3,940,838
JBrowse link
G Lamb1 laminin subunit beta 1 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamb3 laminin subunit beta 3 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr13:112,031,614...112,073,187
Ensembl chr13:112,031,594...112,073,186
JBrowse link
G Mixl1 Mix paired-like homeobox 1 ISO (MGI:5447921|PMID:19038793) RGD PMID:19038793 MGI:5447921 NCBI chr13:97,278,258...97,282,299
Ensembl chr13:98,973,041...98,975,426
Ensembl chr13:98,973,041...98,975,426
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp15 matrix metallopeptidase 15 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr19:10,079,881...10,101,380
Ensembl chr19:10,079,765...10,101,451
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp8 matrix metallopeptidase 8 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 8:5,768,808...5,777,741
Ensembl chr 8:5,768,811...5,778,702
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Nodal nodal growth differentiation factor ISO (PMID:21741376) RGD PMID:21741376 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO (MGI:5908786|PMID:25242323) RGD PMID:25242323 MGI:5908786 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Vtn vitronectin ISO (PMID:23154389) RGD PMID:23154389 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
endodermal cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 IEA
ISO
ISS
GO_REF:0000107
(MGI:3849235|PMID:19345177)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19345177 GO_REF:0000024, GO_REF:0000107, MGI:3849235 NCBI chr13:60,403,771...60,496,511
Ensembl chr13:60,403,771...60,496,511
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:1858007|MGI:2148567 (MGI:3625553|PMID:12194849)
Ensembl
RGD
PMID:12194849 GO_REF:0000107, MGI:3625553 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO (MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:3849235 NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISS
ISO
GO_REF:0000024
(MGI:3849235|PMID:19345177)
UniProt
RGD
PMID:19345177 GO_REF:0000024, MGI:3849235 NCBI chr 8:82,380,906...82,405,293
Ensembl chr 8:82,380,757...82,405,644
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISS
ISO
GO_REF:0000024
(MGI:3849235|PMID:19345177)
UniProt
RGD
PMID:19345177 GO_REF:0000024, MGI:3849235 NCBI chr 1:85,362,421...85,367,999
Ensembl chr 1:85,362,268...85,368,031
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:1355046|PMID:10742100) RGD PMID:10742100 MGI:1355046 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) ISO (MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:3849235 NCBI chr 3:111,478,350...111,537,941
Ensembl chr 3:111,478,382...111,537,941
JBrowse link
endodermal cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 IEA
ISO
GO_REF:0000107
(MGI:4442295|PMID:20308546)
Ensembl
RGD
PMID:20308546 GO_REF:0000107, MGI:4442295 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:4442295|PMID:20308546) RGD PMID:20308546 MGI:4442295 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
endodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin IBA
ISO
PMID:21873635
MGI:3774028 (MGI:4887279|PMID:21245162)
RGD PMID:21245162, PMID:21873635 MGI:4887279, RGD:13792537 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:1857856 (MGI:3807614|PMID:18635606) RGD PMID:18635606 MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Nanog Nanog homeobox ISO (PMID:20713518) RGD PMID:20713518 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:20713518) RGD PMID:20713518 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (PMID:21245162) RGD PMID:21245162 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO MGI:1857254 (MGI:3580923|PMID:15677567), (MGI:3807430|PMID:18550854), (MGI:3838687|PMID:19182774) RGD PMID:15677567, PMID:18550854, PMID:19182774 MGI:3580923, MGI:3807430, MGI:3838687 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
intermediate mesodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10021330)
Ensembl
UniProt
RGD
PMID:10021330 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
lateral mesodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO MGI:1929432 (MGI:1928688|PMID:11124112) RGD PMID:11124112 MGI:1928688 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
mesoderm formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 IEA
ISO
GO_REF:0000107
MGI:1931734|MGI:3696672 (MGI:1345529|PMID:10479450), (MGI:3695845|PMID:17117439)
Ensembl
RGD
PMID:10479450, PMID:17117439 GO_REF:0000107, MGI:1345529, MGI:3695845 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Armc5 armadillo repeat containing 5 ISO MGI:6157645 (MGI:5913685|PMID:28911199) RGD PMID:28911199 MGI:5913685 NCBI chr 1:199,655,069...199,662,419
Ensembl chr 1:199,655,660...199,662,427
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:4415813|PMID:18462699), (MGI:70235|PMID:7799920) RGD PMID:7799920, PMID:18462699 MGI:4415813, MGI:70235 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO MGI:2137520 (MGI:3578079|PMID:15843411) RGD PMID:15843411 MGI:3578079 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO MGI:2158342 (MGI:3722226|PMID:17699604) RGD PMID:17699604 MGI:3722226 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO MGI:2158503 (MGI:1855789|PMID:10772805) RGD PMID:10772805 MGI:1855789 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Chrd chordin IEA
ISO
GO_REF:0000107
MGI:2157350 (MGI:2662951|PMID:12810603)
Ensembl
RGD
PMID:12810603 GO_REF:0000107, MGI:2662951 NCBI chr11:83,858,503...83,867,543
Ensembl chr11:83,858,503...83,867,203
JBrowse link
G Crb2 crumbs cell polarity complex component 2 ISS
ISO
GO_REF:0000024
(MGI:5296388|PMID:22072575), (MGI:5823085|PMID:27870829)
UniProt
RGD
PMID:22072575, PMID:27870829 GO_REF:0000024, MGI:5296388, MGI:5823085 NCBI chr 3:22,037,812...22,061,247
Ensembl chr 3:22,038,357...22,058,871
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:4415813 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Ecsit ECSIT signaling integrator ISO MGI:2683025 (MGI:2682456|PMID:14633973) RGD PMID:14633973 MGI:2682456 NCBI chr 8:23,085,598...23,099,064
Ensembl chr 8:23,085,590...23,099,042
JBrowse link
G Eomes eomesodermin IBA
ISO
PMID:21873635
MGI:2182814 (MGI:1354065|PMID:10716450)
RGD PMID:10716450, PMID:21873635 MGI:1354065, RGD:13792537 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Etv2 ETS variant transcription factor 2 ISO (MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:4415813 NCBI chr 1:89,091,239...89,094,570
Ensembl chr 1:89,091,239...89,094,530
JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO MGI:3608690 (MGI:3608483|PMID:16236767) RGD PMID:16236767 MGI:3608483 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Gpi glucose-6-phosphate isomerase ISO MGI:2177275 (MGI:84014|PMID:8922529) RGD PMID:8922529 MGI:84014 NCBI chr 1:90,063,411...90,091,287
Ensembl chr 1:90,063,411...90,091,287
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 ISO MGI:2153824 (MGI:1197801|PMID:9500550) RGD PMID:9500550 MGI:1197801 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
G Inhba inhibin subunit beta A ISO (MGI:70235|PMID:7799920) RGD PMID:7799920 MGI:70235 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496
JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 ISO MGI:3652899 (MGI:3640889|PMID:16815997) RGD PMID:16815997 MGI:3640889 NCBI chr 5:141,039,455...141,363,524
Ensembl chr 5:141,039,468...141,363,524
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:141,550,633...141,553,239
Ensembl chr 1:141,550,633...141,553,230
JBrowse link
G Msgn1 mesogenin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:36,876,165...36,876,805
Ensembl chr 6:36,876,165...36,876,805
JBrowse link
G Nf2 neurofibromin 2 IEA
ISO
GO_REF:0000107
MGI:1857941 (MGI:707944|PMID:9171370)
Ensembl
RGD
PMID:9171370 GO_REF:0000107, MGI:707944 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Nog noggin IEA
ISO
GO_REF:0000107
(MGI:4415813|PMID:18462699)
Ensembl
RGD
PMID:18462699 GO_REF:0000107, MGI:4415813 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 ISO MGI:3043761 (MGI:3042044|PMID:13129926) RGD PMID:13129926 MGI:3042044 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Pofut2 protein O-fucosyltransferase 2 ISO MGI:3604508|MGI:4127173 (MGI:4838381|PMID:20637190) RGD PMID:20637190 MGI:4838381 NCBI chr20:12,117,811...12,128,747
Ensembl chr20:12,117,811...12,128,747
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha IEA
ISO
GO_REF:0000107
MGI:97592 (MGI:2183097|PMID:12004056)
Ensembl
RGD
PMID:12004056 GO_REF:0000107, MGI:2183097 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ISO MGI:2183602 (MGI:2183097|PMID:12004056) RGD PMID:12004056 MGI:2183097 NCBI chr10:97,940,705...97,959,199
Ensembl chr10:97,940,705...97,957,336
JBrowse link
G Scx scleraxis bHLH transcription factor ISO (MGI:1343990|PMID:10477299) RGD PMID:10477299 MGI:1343990 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Smad2 SMAD family member 2 ISS
ISO
GO_REF:0000024
MGI:1857691 (MGI:3039049|PMID:15084457)
UniProt
RGD
PMID:15084457 GO_REF:0000024, MGI:3039049 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:1857696 (MGI:3039049|PMID:15084457) RGD PMID:15084457 MGI:3039049 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Snai1 snail family transcriptional repressor 1 ISO (MGI:2153695|PMID:11689706) RGD PMID:11689706 MGI:2153695 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Srf serum response factor ISO MGI:2158696 (MGI:1312998|PMID:9799237), (MGI:1927031|PMID:11060034) RGD PMID:9799237, PMID:11060034 MGI:1312998, MGI:1927031 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tbx19 T-box transcription factor 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:83,403,263...83,426,305
Ensembl chr13:83,403,264...83,425,641
JBrowse link
G Tbx6 T-box transcription factor 6 ISO MGI:2447721|MGI:3578143 (MGI:2447720|PMID:9490412), (MGI:3577662|PMID:15755804) RGD PMID:9490412, PMID:15755804 MGI:2447720, MGI:3577662 NCBI chr 1:198,214,797...198,218,706
Ensembl chr 1:198,214,797...198,218,706
JBrowse link
G Tbxt T-box transcription factor T IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
G Tlx2 T-cell leukemia homeobox 2 ISO MGI:1857514 (MGI:1267265|PMID:9550720) RGD PMID:9550720 MGI:1267265 NCBI chr 4:114,766,401...114,768,243
Ensembl chr 4:114,766,714...114,768,029
Ensembl chr 4:114,766,714...114,768,029
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO MGI:103302 (MGI:3578079|PMID:15843411) RGD PMID:15843411 MGI:3578079 NCBI chr 9:113,699,151...113,732,601
Ensembl chr 9:113,699,170...113,732,622
JBrowse link
G Txnrd1 thioredoxin reductase 1 IEA
ISO
GO_REF:0000107
MGI:3722092 (MGI:3721365|PMID:17697936)
Ensembl
RGD
PMID:17697936 GO_REF:0000107, MGI:3721365 NCBI chr 7:26,946,124...26,984,400
Ensembl chr 7:26,946,125...26,984,400
JBrowse link
G Wls Wnt ligand secretion mediator ISO (MGI:4397730|PMID:19841259) RGD PMID:19841259 MGI:4397730 NCBI chr 2:266,315,036...266,431,220
Ensembl chr 2:266,315,036...266,432,558
JBrowse link
G Wnt3 Wnt family member 3 ISO MGI:2178826 (MGI:1341483|PMID:10431240) RGD PMID:10431240 MGI:1341483 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
mesoderm migration involved in gastrulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G LOC100912649 uncharacterized LOC100912649 ISS GO_REF:0000024 UniProt GO_REF:0000024
G Tbxt T-box transcription factor T ISO MGI:1857760 (MGI:71468|PMID:7720590) RGD PMID:7720590 MGI:71468 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
mesodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (MGI:70235|PMID:7799920) RGD PMID:7799920 MGI:70235 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IEP RGD PMID:7803853 RGD:632663 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:17624332)
GO_REF:0000024
RGD
UniProt
PMID:17624332 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Inhba inhibin subunit beta A ISO (MGI:70235|PMID:7799920) RGD PMID:7799920 MGI:70235 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496
JBrowse link
G Itga2 integrin subunit alpha 2 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Itga3 integrin subunit alpha 3 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
G Itga8 integrin subunit alpha 8 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr17:79,321,893...79,676,927
Ensembl chr17:79,321,900...79,676,499
JBrowse link
G Itgb1 integrin subunit beta 1 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb3 integrin subunit beta 3 ISO (PMID:23154389) RGD PMID:23154389 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Itgb4 integrin subunit beta 4 IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
JBrowse link
G Kdm6a lysine demethylase 6A ISO MGI:5448754|MGI:5448825 (MGI:5448135|PMID:22949634) RGD PMID:22949634 MGI:5448135 NCBI chr  X:4,805,493...4,945,788
Ensembl chr  X:4,806,277...4,945,944
JBrowse link
G Kdm6b lysine demethylase 6B ISO (MGI:5574281|PMID:23856522) RGD PMID:23856522 MGI:5574281 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
mesodermal cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanog Nanog homeobox ISO MGI:109452 (MGI:3654744|PMID:16801560) RGD PMID:16801560 MGI:3654744 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:1355046|PMID:10742100) RGD PMID:10742100 MGI:1355046 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Smad1 SMAD family member 1 IEA
ISO
GO_REF:0000107
MGI:1919200 (MGI:3654744|PMID:16801560)
Ensembl
RGD
PMID:16801560 GO_REF:0000107, MGI:3654744 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
mesodermal cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:1857137 (MGI:76261|PMID:7657163)
Ensembl
RGD
PMID:7657163 GO_REF:0000107, MGI:76261 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
mesodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO (MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:3768605 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Hoxa11 homeobox A11 ISO (MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:3768605 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:3768605|PMID:17785448)
UniProt
RGD
PMID:17785448 GO_REF:0000024, MGI:3768605 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Six2 SIX homeobox 2 ISO (MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:3768605 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd7 frizzled class receptor 7 ISO (PMID:18681827) RGD PMID:18681827 NCBI chr 9:66,305,731...66,308,550
Ensembl chr 9:66,305,731...66,308,550
JBrowse link
negative regulation of endodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a2 collagen type V alpha 2 chain ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:98956 (MGI:3711603|PMID:17462603) RGD PMID:17462603 MGI:3711603 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
paraxial mesoderm formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 IEA
ISO
GO_REF:0000107
MGI:4975171 (MGI:1195048|PMID:9441674)
Ensembl
RGD
PMID:9441674 GO_REF:0000107, MGI:1195048 NCBI chr 4:60,549,128...61,358,305
Ensembl chr 4:60,549,197...61,355,994
JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1347481 (MGI:2150572|PMID:11562355), (MGI:3047050|PMID:15196959) RGD PMID:11562355, PMID:15196959 MGI:2150572, MGI:3047050 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1347466 (MGI:2150572|PMID:11562355) RGD PMID:11562355 MGI:2150572 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:96770 (MGI:1334099|PMID:10090727) RGD PMID:10090727 MGI:1334099 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Htt huntingtin ISO MGI:1857180 (MGI:3609520|PMID:16109169) RGD PMID:16109169 MGI:3609520 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
MGI:98504 (MGI:1334099|PMID:10090727)
Ensembl
RGD
PMID:10090727 GO_REF:0000107, MGI:1334099 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:98958 (MGI:5634837|PMID:25813538) RGD PMID:25813538 MGI:5634837 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
MGI:101948 (MGI:5634837|PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107, MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 ISO MGI:1857865 (MGI:86990|PMID:9106663) RGD PMID:9106663 MGI:86990 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:1857489 (MGI:86727|PMID:9126297) RGD PMID:9126297 MGI:86727 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of endodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone ISO (PMID:23595991) RGD PMID:23595991 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
positive regulation of mesodermal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 ISO (PMID:30599359) RGD PMID:30599359 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A ISO (PMID:20559569) RGD PMID:20559569 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A ISO MGI:95522 (MGI:3702797|PMID:16943278) RGD PMID:16943278 MGI:3702797 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEA
ISO
GO_REF:0000107
MGI:1338938 (MGI:3702797|PMID:16943278)
Ensembl
RGD
PMID:16943278 GO_REF:0000107, MGI:3702797 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure formation involved in morphogenesis 1214
        formation of primary germ layer 128
          cell fate commitment involved in formation of primary germ layer + 31
          ectoderm formation + 6
          endoderm formation + 56
          mesoderm formation + 75
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          embryo development 1307
            embryonic morphogenesis 690
              gastrulation 208
                formation of primary germ layer 128
                  cell fate commitment involved in formation of primary germ layer + 31
                  ectoderm formation + 6
                  endoderm formation + 56
                  mesoderm formation + 75
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.