ONTOLOGY REPORT - ANNOTATIONS


Term:trophectodermal cell differentiation
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Accession:GO:0001829 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires the specialized features of a trophectoderm cell.
Comment:See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, trophectoderm ; EMAP:19'.
Synonyms:exact_synonym: trophectoderm cell differentiation
 xref: MIPS_funcat:41.05.03.03.01


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trophectodermal cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1624291
RGD:1600115
G Bysl bystin-like JBrowse link 9 15,393,461 15,403,212 RGD:1624291
RGD:1600115
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:1624291
G Cdx2 caudal type homeo box 2 JBrowse link 12 9,464,026 9,470,565 RGD:1624291
RGD:1600115
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 1 12,823,363 12,825,806 RGD:1624291
RGD:1600115
G Cnot1 CCR4-NOT transcription complex, subunit 1 JBrowse link 19 9,668,186 9,761,605 RGD:1624291
G Cnot2 CCR4-NOT transcription complex, subunit 2 JBrowse link 7 59,526,105 59,617,307 RGD:1624291
RGD:1600115
G Cnot3 CCR4-NOT transcription complex, subunit 3 JBrowse link 1 64,130,823 64,147,066 RGD:1624291
RGD:1600115
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 1 175,839,140 175,869,167 RGD:1624291
RGD:1600115
G Eomes eomesodermin JBrowse link 8 127,144,367 127,152,618 RGD:1624291
G Foxd3 forkhead box D3 JBrowse link 5 118,346,283 118,349,120 RGD:1624291
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link 10 43,250,729 43,253,296 RGD:1624291
RGD:1600115
G Hopx HOP homeobox JBrowse link 14 33,354,803 33,362,547 RGD:1624291
RGD:1600115
G Junb JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 19 26,092,972 26,094,756 RGD:1600115
RGD:1624291
G Nodal nodal growth differentiation factor JBrowse link 20 31,035,729 31,044,096 RGD:1624291
G Pou5f1 POU class 5 homeobox 1 JBrowse link 20 3,747,231 3,751,994 RGD:1624291
RGD:1600115
G Rbm46 RNA binding motif protein 46 JBrowse link 2 181,828,931 181,874,223 RGD:1624291
RGD:1600115
G Sp1 Sp1 transcription factor JBrowse link 7 144,014,173 144,044,635 RGD:1624291
G Sp3 Sp3 transcription factor JBrowse link 3 59,644,579 59,689,011 RGD:1624291
RGD:1600115
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
RGD:1600115
G Tfap2c transcription factor AP-2 gamma JBrowse link 3 170,550,314 170,558,197 RGD:1624291
trophectodermal cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prickle2 prickle planar cell polarity protein 2 JBrowse link 4 124,238,167 124,584,176 RGD:1624291
G Tead4 TEA domain transcription factor 4 JBrowse link 4 161,542,566 161,619,848 RGD:1624291
trophectodermal cellular morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:1624291
RGD:1600115
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:1624291
G Nodal nodal growth differentiation factor JBrowse link 20 31,035,729 31,044,096 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17942
    developmental process 6375
      cellular developmental process 4346
        cell differentiation 4130
          trophectodermal cell differentiation 25
            trophectodermal cell fate commitment 2
            trophectodermal cellular morphogenesis 3
Path 2
Term Annotations click to browse term
  biological_process 17942
    developmental process 6375
      anatomical structure development 5982
        multicellular organism development 5475
          embryo development 1247
            embryo development ending in birth or egg hatching 839
              chordate embryonic development 823
                in utero embryonic development 534
                  blastocyst development 149
                    blastocyst formation 57
                      trophectodermal cell differentiation 25
                        trophectodermal cell fate commitment 2
                        trophectodermal cellular morphogenesis 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.