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ONTOLOGY REPORT - ANNOTATIONS


Term:blastocyst growth
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Accession:GO:0001832 term browser browse the term
Definition:An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation.
Comment:See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, blastocoelic cavity ; EMAP:17', 'TS5, blastocoelic cavity ; EMAP:27' and 'TS6, blastocoelic cavity ; EMAP:36'.


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blastocyst growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 1 175,839,140 175,869,167 RGD:1624291
RGD:1600115
G Ints1 integrator complex subunit 1 JBrowse link 12 16,950,704 16,974,896 RGD:1624291
G Nbn nibrin JBrowse link 5 29,622,347 29,656,877 RGD:1600115
RGD:1624291
G Pou5f1 POU class 5 homeobox 1 JBrowse link 20 3,747,231 3,751,994 RGD:1624291
RGD:1600115
G Rad51b RAD51 paralog B JBrowse link 6 102,473,978 103,018,185 RGD:1624291
G Rln1 relaxin 1 JBrowse link 1 247,483,298 247,486,331 RGD:1624291
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) JBrowse link 3 111,478,350 111,537,941 RGD:1624291
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
G Ubtfl1 upstream binding transcription factor like 1 RGD:1624291
G Ubtfl6-p1 UBTF like 6, pseudogene 1 JBrowse link 8 17,525,070 17,530,404 RGD:1624291
G Zfp830 zinc finger protein 830 JBrowse link 10 70,118,250 70,119,714 RGD:1624291
RGD:1600115
inner cell mass cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1624291
RGD:1600115
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:1624291
G Chek1 checkpoint kinase 1 JBrowse link 8 39,181,162 39,201,588 RGD:1624291
G Cops2 COP9 signalosome subunit 2 JBrowse link 3 118,109,394 118,137,125 RGD:1624291
RGD:1600115
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
G Gins1 GINS complex subunit 1 JBrowse link 3 146,695,366 146,716,787 RGD:1624291
RGD:1600115
G Gins4 GINS complex subunit 4 JBrowse link 16 73,584,412 73,596,808 RGD:1624291
RGD:1600115
G Ints1 integrator complex subunit 1 JBrowse link 12 16,950,704 16,974,896 RGD:1624291
G Ncapg2 non-SMC condensin II complex, subunit G2 JBrowse link 6 144,291,313 144,362,454 RGD:1624291
RGD:1600115
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:1624291
RGD:1600115
G Palb2 partner and localizer of BRCA2 JBrowse link 1 192,064,586 192,088,547 RGD:1624291
RGD:1600115
G Pelo pelota mRNA surveillance and ribosome rescue factor JBrowse link 2 47,266,758 47,268,526 RGD:1624291
RGD:1600115
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
RGD:1600115
G Sall4 spalt-like transcription factor 4 JBrowse link 3 165,520,155 165,538,176 RGD:1624291
RGD:1600115
G Sbds SBDS, ribosome maturation factor JBrowse link 12 29,921,443 29,930,602 RGD:1624291
RGD:1600115
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link 2 196,495,867 196,527,412 RGD:1624291
G Taf8 TATA-box binding protein associated factor 8 JBrowse link 9 15,513,048 15,532,992 RGD:1624291
RGD:1600115
G Zpr1 ZPR1 zinc finger JBrowse link 8 50,563,047 50,572,621 RGD:1624291
RGD:1600115
positive regulation of trophectodermal cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
trophectodermal cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:1624291
G Zpr1 ZPR1 zinc finger JBrowse link 8 50,563,047 50,572,621 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18008
    developmental process 6505
      developmental growth 814
        blastocyst growth 32
          inner cell mass cell proliferation 18
          trophectodermal cell proliferation + 5
Path 2
Term Annotations click to browse term
  biological_process 18008
    developmental process 6505
      anatomical structure development 5993
        multicellular organism development 5478
          embryo development 1251
            embryo development ending in birth or egg hatching 840
              chordate embryonic development 824
                in utero embryonic development 534
                  blastocyst development 149
                    blastocyst growth 32
                      inner cell mass cell proliferation 18
                      trophectodermal cell proliferation + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.