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ONTOLOGY REPORT - ANNOTATIONS


Term:neural plate development
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Accession:GO:0001840 term browser browse the term
Definition:The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.


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neural plate development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
(MGI:5302997|PMID:22102609)
Ensembl
RGD
PMID:22102609 GO_REF:0000107, MGI:5302997 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:106613 (MGI:3624185|PMID:16571627) RGD PMID:16571627 MGI:3624185 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO MGI:2135272|MGI:2429760|MGI:94941 (MGI:3624185|PMID:16571627) RGD PMID:16571627 MGI:3624185 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:106613|MGI:1857642 (MGI:3624185|PMID:16571627), (MGI:3703464|PMID:17229766) RGD PMID:16571627, PMID:17229766 MGI:3624185, MGI:3703464 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
neural plate axis specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr 1:165,382,279...165,480,088
Ensembl chr 1:165,382,690...165,479,655
JBrowse link
G Ptch1 patched 1 ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
neural plate formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin ISO MGI:2177743 (MGI:73644|PMID:7774020) RGD PMID:7774020 MGI:73644 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO MGI:3578147|MGI:3822451 (MGI:3714667|PMID:17507402), (MGI:3821807|PMID:18794329) RGD PMID:17507402, PMID:18794329 MGI:3714667, MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:1857843 (MGI:3624179|PMID:16613831) RGD PMID:16613831 MGI:3624179 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Nog noggin IEA
ISO
GO_REF:0000107
MGI:1862000 (MGI:3640733|PMID:16712836)
Ensembl
RGD
PMID:16712836 GO_REF:0000107, MGI:3640733 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Tbxt T-box transcription factor T ISO MGI:3042264 (MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:3056222 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        tissue development 2099
          epithelium development 1262
            neural plate development 11
              neural plate axis specification 2
              neural plate morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          embryo development 1307
            embryo development ending in birth or egg hatching 861
              chordate embryonic development 845
                neural plate development 11
                  neural plate axis specification 2
                  neural plate morphogenesis + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.