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ONTOLOGY REPORT - ANNOTATIONS


Term:tissue homeostasis
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Accession:GO:0001894 term browser browse the term
Definition:A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.
Synonyms:narrow_synonym: tissue maintenance


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tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha IEA
ISO
GO_REF:0000107
MGI:3700954|MGI:3700955 (MGI:3700580|PMID:17210641)
Ensembl
RGD
PMID:17210641 GO_REF:0000107, MGI:3700580 NCBI chr10:71,519,392...71,719,910
Ensembl chr10:71,536,533...71,719,910
JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B IMP lens opacification RGD PMID:21376710 RGD:8548687 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Ankrd11 ankyrin repeat domain 11 ISO MGI:3797584 (MGI:3796348|PMID:17986521) RGD PMID:17986521 MGI:3796348 NCBI chr19:55,703,831...55,862,446
Ensembl chr19:55,703,824...55,737,500
JBrowse link
G Ccn2 cellular communication network factor 2 ISO MGI:4949916 (MGI:5520132|PMID:23839921) RGD PMID:23839921 MGI:5520132 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Cd34 CD34 molecule ISO
ISS
(PMID:12939361)
GO_REF:0000024
RGD
UniProt
PMID:12939361 GO_REF:0000024 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
G Col11a2 collagen type XI alpha 2 chain ISO MGI:2154689 (MGI:3691874|PMID:11237662) RGD PMID:11237662 MGI:3691874 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEA
ISO
GO_REF:0000107
MGI:2152978 (MGI:3691874|PMID:11237662)
Ensembl
RGD
PMID:11237662 GO_REF:0000107, MGI:3691874 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col9a1 collagen type IX alpha 1 chain ISO MGI:2152964 (MGI:67050|PMID:8197187) RGD PMID:8197187 MGI:67050 NCBI chr 9:30,419,001...30,502,307
Ensembl chr 9:30,419,001...30,502,298
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:1858008 (MGI:3807613|PMID:18635608) RGD PMID:18635608 MGI:3807613 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Gnas GNAS complex locus ISO MGI:4459474 (MGI:4454202|PMID:20427744) RGD PMID:20427744 MGI:4454202 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hoxa13 homeo box A13 ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:17118629 RGD:1625131 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 ISO MGI:2388372 (MGI:2387900|PMID:12122007) RGD PMID:12122007 MGI:2387900 NCBI chr 8:33,490,280...33,519,127
Ensembl chr 8:33,514,042...33,518,165
JBrowse link
G Mir140 microRNA 140 ISO MGI:4461000 (MGI:4454342|PMID:20466812) RGD PMID:20466812 MGI:4454342 NCBI chr19:39,608,951...39,609,049
Ensembl chr19:39,608,951...39,609,049
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 ISO MGI:97874 (MGI:5607667|PMID:25100735) RGD PMID:25100735 MGI:5607667 NCBI chr 1:282,134,676...282,140,370
Ensembl chr 1:282,134,981...282,135,772
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO MGI:2135508 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Prlh prolactin releasing hormone ISO MGI:3832409 (MGI:3831610|PMID:19033670) RGD PMID:19033670 MGI:3831610 NCBI chr 9:98,111,391...98,114,831
Ensembl chr 9:98,113,346...98,114,248
JBrowse link
G Rb1 RB transcriptional corepressor 1 IEA
ISO
GO_REF:0000107
MGI:2669254 (MGI:5607667|PMID:25100735)
Ensembl
RGD
PMID:25100735 GO_REF:0000107, MGI:5607667 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Scx scleraxis bHLH transcription factor ISO (MGI:4413438|PMID:18802027) RGD PMID:18802027 MGI:4413438 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:4947506|PMID:20056916)
UniProt
RGD
PMID:20056916 GO_REF:0000024, MGI:4947506 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Stk11 serine/threonine kinase 11 IEA
ISO
GO_REF:0000107
MGI:3579498 (MGI:3778268|PMID:18381428)
Ensembl
RGD
PMID:18381428 GO_REF:0000107, MGI:3778268 NCBI chr 7:12,440,751...12,457,513
Ensembl chr 7:12,440,751...12,457,513
JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 IEA
ISO
GO_REF:0000107
MGI:1931135|MGI:5637673 (MGI:5582129|PMID:24713655)
Ensembl
RGD
PMID:24713655 GO_REF:0000107, MGI:5582129 NCBI chr 3:150,910,398...150,918,525
Ensembl chr 3:150,910,398...150,918,525
JBrowse link
G Trim32 tripartite motif-containing 32 ISO MGI:3837468 (MGI:3836840|PMID:19155210) RGD PMID:19155210 MGI:3836840 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO (MGI:5509071|PMID:23918388) RGD PMID:23918388 MGI:5509071 NCBI chr 2:147,577,149...147,693,033
Ensembl chr 2:147,577,089...147,693,082
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (MGI:5509071|PMID:23918388) RGD PMID:23918388 MGI:5509071 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant TAS
ISO
IBA
IEA
IEP
MGI:2180086 (MGI:83673|PMID:8898228)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:8898228, PMID:1722212, PMID:21873635, PMID:20069278 GO_REF:0000107, MGI:83673, RGD:1298628, RGD:13792537, RGD:2315871 NCBI chr 8:23,142,733...23,149,067
Ensembl chr 8:23,142,734...23,148,396
JBrowse link
G Adrb2 adrenoceptor beta 2 IEA
ISO
GO_REF:0000107
MGI:1859675 (MGI:3575849|PMID:15724149)
Ensembl
RGD
PMID:15724149 GO_REF:0000107, MGI:3575849 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Ccdc154 coiled-coil domain containing 154 ISO MGI:5702426 (MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:5697796 NCBI chr10:14,518,240...14,529,920
Ensembl chr10:14,519,164...14,528,277
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:1858008|MGI:2148567|MGI:3041864|MGI:98504 (MGI:3578468|PMID:15866165)
Ensembl
RGD
PMID:15866165 GO_REF:0000107, MGI:3578468 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctsk cathepsin K IMP
ISO
MGI:2182131 (MGI:4397742|PMID:19834056) RGD PMID:19834056, PMID:10430032 MGI:4397742, RGD:1601030 NCBI chr 2:196,655,469...196,666,447
Ensembl chr 2:196,655,469...196,666,446
JBrowse link
G Ctss cathepsin S IMP RGD PMID:10470376 RGD:5687153 NCBI chr 2:197,655,780...197,679,768
Ensembl chr 2:197,655,786...197,679,458
JBrowse link
G Gpr55 G protein-coupled receptor 55 ISO (PMID:19805329) RGD PMID:19805329 NCBI chr 9:92,961,431...93,011,157
Ensembl chr 9:92,962,738...92,963,697
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:88276 (MGI:3578468|PMID:15866165) RGD PMID:15866165 MGI:3578468 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:1335697|PMID:10208865) RGD PMID:10208865 MGI:1335697 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Il7 interleukin 7 IEA
ISO
ISS
GO_REF:0000107
(MGI:2448204|PMID:12490655)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12490655 GO_REF:0000024, GO_REF:0000107, MGI:2448204 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 ISO MGI:5568128 (MGI:5564766|PMID:23526378) RGD PMID:23526378 MGI:5564766 NCBI chr 1:127,166,866...127,301,053
Ensembl chr 1:127,166,431...127,292,090
JBrowse link
G Mir34a microRNA 34a ISO (MGI:5613071|PMID:25043055) RGD PMID:25043055 MGI:5613071 NCBI chr 5:167,092,491...167,092,592
Ensembl chr 5:167,092,491...167,092,592
JBrowse link
G Ncdn neurochondrin ISO (MGI:1336772|PMID:10231559) RGD PMID:10231559 MGI:1336772 NCBI chr 5:144,769,452...144,779,271
Ensembl chr 5:144,769,452...144,779,212
JBrowse link
G Nox4 NADPH oxidase 4 ISO (MGI:1930898|PMID:11098048) RGD PMID:11098048 MGI:1930898 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
G Pth parathyroid hormone TAS RGD PMID:11145578 RGD:61525 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO MGI:2154519 (MGI:3624906|PMID:9832460) RGD PMID:9832460 MGI:3624906 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISS
ISO
GO_REF:0000024
(MGI:3040548|PMID:14739300)
UniProt
RGD
PMID:14739300 GO_REF:0000024, MGI:3040548 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rab3d RAB3D, member RAS oncogene family ISO (PMID:21262767) RGD PMID:21262767 NCBI chr 8:22,920,238...22,929,368
Ensembl chr 8:22,918,699...22,929,294
JBrowse link
G Rab7a RAB7A, member RAS oncogene family IMP RGD PMID:11514537 RGD:729760 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rac1 Rac family small GTPase 1 IDA RGD PMID:10350213 RGD:1599401 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac2 Rac family small GTPase 2 IDA RGD PMID:10350213 RGD:1599401 NCBI chr 7:119,769,708...119,797,111
Ensembl chr 7:119,783,849...119,797,098
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:5690193 (MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISS
ISO
IBA
GO_REF:0000024
MGI:1857247 (MGI:3040548|PMID:14739300), (MGI:4353464|PMID:19448635)
PMID:21873635
UniProt
RGD
PMID:14739300, PMID:19448635, PMID:21873635 GO_REF:0000024, MGI:3040548, MGI:4353464, RGD:13792537 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:1856973|MGI:5496553 (MGI:3829104|PMID:18768394), (MGI:5308498|PMID:22087326), (MGI:5470331|PMID:23166162), (MGI:5488585|PMID:21305608), (MGI:6296816|PMID:23908015) RGD PMID:18768394, PMID:21305608, PMID:22087326, PMID:23166162, PMID:23908015 MGI:3829104, MGI:5308498, MGI:5470331, MGI:5488585, MGI:6296816 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO (MGI:2448204|PMID:12490655) RGD PMID:12490655 MGI:2448204 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
G Tpp1 tripeptidyl peptidase 1 IEA
ISS
ISO
GO_REF:0000107
PMID:14609438
(PMID:8215436)
Ensembl
RGD
PMID:8215436, PMID:14609438 GO_REF:0000107, RGD:8554137 NCBI chr 1:170,588,036...170,594,159
Ensembl chr 1:170,588,035...170,594,168
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (MGI:1335941|PMID:10215628) RGD PMID:10215628 MGI:1335941 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
cartilage homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cytl1 cytokine like 1 ISO MGI:5291960 (MGI:5285461|PMID:21652695) RGD PMID:21652695 MGI:5285461 NCBI chr14:77,805,137...77,810,147
Ensembl chr14:77,805,130...77,810,147
JBrowse link
G Idua alpha-L-iduronidase ISO MGI:2176236 (MGI:4397742|PMID:19834056) RGD PMID:19834056 MGI:4397742 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 ISO (MGI:5577232|PMID:24529376) RGD PMID:24529376 MGI:5577232 NCBI chr 5:142,797,340...142,843,896
Ensembl chr 5:142,797,366...142,842,122
JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISS
ISO
GO_REF:0000024
(MGI:5577232|PMID:24529376)
UniProt
RGD
PMID:24529376 GO_REF:0000024, MGI:5577232 NCBI chr 2:241,028,851...241,092,584
Ensembl chr 2:241,029,693...241,092,582
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 ISO (PMID:24474754) RGD PMID:24474754 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
chemical homeostasis within a tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Homer1 homer scaffold protein 1 ISO MGI:3526529 (MGI:3530962|PMID:15294147) RGD PMID:15294147 MGI:3530962 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Homer2 homer scaffold protein 2 ISO MGI:3526530 (MGI:3530962|PMID:15294147) RGD PMID:15294147 MGI:3530962 NCBI chr 1:143,443,300...143,535,579
Ensembl chr 1:143,443,300...143,535,583
JBrowse link
epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics ISO (MGI:6271776|PMID:30361697) RGD PMID:30361697 MGI:6271776 NCBI chr14:33,649,989...33,783,794
Ensembl chr14:33,649,637...33,677,031
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin ISO MGI:3580447 (MGI:3580205|PMID:15870283) RGD PMID:15870283 MGI:3580205 NCBI chr 5:159,540,453...159,583,194
Ensembl chr 5:159,540,421...159,583,049
JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule ISO
ISS
(PMID:15304526)
GO_REF:0000024
RGD
UniProt
PMID:15304526 GO_REF:0000024 NCBI chr11:16,826,269...16,873,564
Ensembl chr11:16,826,399...16,873,562
JBrowse link
G Ldb1 LIM domain binding 1 ISO MGI:894670 (MGI:3768693|PMID:17991461) RGD PMID:17991461 MGI:3768693 NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167
JBrowse link
G Ldb2 LIM domain binding 2 ISO MGI:894762 (MGI:3768693|PMID:17991461) RGD PMID:17991461 MGI:3768693 NCBI chr14:70,780,605...71,112,857
Ensembl chr14:70,780,623...71,112,552
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
MGI:4410614|MGI:4433029|MGI:4887578 (MGI:4367169|PMID:19776033), (MGI:4868517|PMID:21045211), (MGI:5487695|PMID:23454480)
Ensembl
RGD
PMID:19776033, PMID:21045211, PMID:23454480 GO_REF:0000107, MGI:4367169, MGI:4868517, MGI:5487695 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 ISS
ISO
IEA
GO_REF:0000024
(PMID:28025795)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28025795 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:13,208,774...13,251,970
Ensembl chr 8:13,208,774...13,251,812
JBrowse link
G Srf serum response factor ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
homeostasis of number of cells within a tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 IEA
ISO
GO_REF:0000107
MGI:3799499 (MGI:3806792|PMID:18723693)
Ensembl
RGD
PMID:18723693 GO_REF:0000107, MGI:3806792 NCBI chr14:81,367,466...81,426,610
Ensembl chr14:81,367,468...81,426,496
JBrowse link
G Akt3 AKT serine/threonine kinase 3 IEA
ISO
GO_REF:0000107
MGI:3574346 (MGI:3531618|PMID:15713641)
Ensembl
RGD
PMID:15713641 GO_REF:0000107, MGI:3531618 NCBI chr13:95,076,308...95,348,913
Ensembl chr13:95,081,390...95,348,913
JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857249|MGI:1857429 (MGI:3054131|PMID:15342910), (MGI:3653046|PMID:11413548)
Ensembl
RGD
PMID:11413548, PMID:15342910 GO_REF:0000107, MGI:3054131, MGI:3653046 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857134|MGI:2158305 (MGI:3618415|PMID:16427619), (MGI:894988|PMID:9241272)
Ensembl
RGD
PMID:9241272, PMID:16427619 GO_REF:0000107, MGI:3618415, MGI:894988 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 ISO MGI:2158345 (MGI:1100445|PMID:9342361) RGD PMID:9342361 MGI:1100445
G Cd7 Cd7 molecule ISO MGI:2180804 (MGI:1274973|PMID:9637484) RGD PMID:9637484 MGI:1274973 NCBI chr10:110,229,931...110,232,812
Ensembl chr10:110,229,922...110,232,843
JBrowse link
G Col14a1 collagen type XIV alpha 1 chain ISO MGI:3846440 (MGI:5444801|PMID:22906538) RGD PMID:22906538 MGI:5444801 NCBI chr 7:95,054,877...95,274,073
Ensembl chr 7:95,074,236...95,273,298
JBrowse link
G Coro1a coronin 1A ISO MGI:3818509 (MGI:3818245|PMID:18836449) RGD PMID:18836449 MGI:3818245 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Csf1 colony stimulating factor 1 ISO MGI:1856333 (MGI:893319|PMID:9215625) RGD PMID:9215625 MGI:893319 NCBI chr 2:210,522,370...210,550,546
Ensembl chr 2:210,522,375...210,550,560
JBrowse link
G F2r coagulation factor II (thrombin) receptor ISS
ISO
IEA
GO_REF:0000024
MGI:3038377 (MGI:3784647|PMID:18305483)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18305483 GO_REF:0000024, GO_REF:0000107, MGI:3784647 NCBI chr 2:26,118,760...26,135,340
Ensembl chr 2:26,118,760...26,135,340
JBrowse link
G Fh fumarate hydratase ISO MGI:2665300|MGI:3710112 (MGI:3708434|PMID:17418408) RGD PMID:17418408 MGI:3708434 NCBI chr13:93,651,486...93,677,371
Ensembl chr13:93,651,484...93,677,377
JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 ISO MGI:3628823|MGI:96995 (MGI:4452060|PMID:20457904), (MGI:5444341|PMID:22674806) RGD PMID:20457904, PMID:22674806 MGI:4452060, MGI:5444341 NCBI chr12:9,360,439...9,437,004
Ensembl chr12:9,360,672...9,436,570
JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand ISO MGI:97799 (MGI:4849322|PMID:21048959) RGD PMID:21048959 MGI:4849322 NCBI chr 1:101,126,006...101,131,413
Ensembl chr 1:101,124,479...101,131,413
JBrowse link
G Gata1 GATA binding protein 1 ISO MGI:95662 (MGI:3027433|PMID:14504093) RGD PMID:14504093 MGI:3027433 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:1857743|MGI:95661 (MGI:3027433|PMID:14504093), (MGI:3621261|PMID:15811962) RGD PMID:14504093, PMID:15811962 MGI:3027433, MGI:3621261 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 ISO MGI:4126459 (MGI:4366664|PMID:19744960) RGD PMID:19744960 MGI:4366664 NCBI chr 9:94,425,191...94,550,431
Ensembl chr 9:94,425,252...94,550,431
JBrowse link
G Il20rb interleukin 20 receptor subunit beta ISO MGI:3830304 (MGI:3827040|PMID:19124723) RGD PMID:19124723 MGI:3827040 NCBI chr 8:108,745,906...108,778,561
Ensembl chr 8:108,747,204...108,777,717
JBrowse link
G Il7 interleukin 7 IEA
ISO
GO_REF:0000107
MGI:1857652 (MGI:894974|PMID:9252127)
Ensembl
RGD
PMID:9252127 GO_REF:0000107, MGI:894974 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Ildr2 immunoglobulin-like domain containing receptor 2 ISO MGI:3820395 (MGI:3804573|PMID:18654634) RGD PMID:18654634 MGI:3804573 NCBI chr13:84,474,191...84,532,347
Ensembl chr13:84,474,319...84,530,031
JBrowse link
G Klhl10 kelch-like family member 10 ISO MGI:3040869 (MGI:3040865|PMID:15136734) RGD PMID:15136734 MGI:3040865 NCBI chr10:88,356,652...88,372,929
Ensembl chr10:88,356,615...88,372,899
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO MGI:95559 (MGI:5444341|PMID:22674806) RGD PMID:22674806 MGI:5444341 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO MGI:99511 (MGI:5588640|PMID:24675817) RGD PMID:24675817 MGI:5588640 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lipa lipase A, lysosomal acid type ISO MGI:2451080 (MGI:3603471|PMID:14644759) RGD PMID:14644759 MGI:3603471 NCBI chr 1:252,816,536...252,959,348
Ensembl chr 1:252,816,527...252,849,904
JBrowse link
G Nos3 nitric oxide synthase 3 IEA
ISO
GO_REF:0000107
UniProtKB:Q01705 (MGI:6158784|PMID:27107132)
Ensembl
RGD
PMID:27107132 GO_REF:0000107, MGI:6158784 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Notch1 notch receptor 1 ISO UniProtKB:P70313 (MGI:6158784|PMID:27107132) RGD PMID:27107132 MGI:6158784 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:3796378|PMID:16969386) RGD PMID:16969386 MGI:3796378 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Prdm14 PR/SET domain 14 ISO MGI:3805889 (MGI:3805418|PMID:18622394) RGD PMID:18622394 MGI:3805418 NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560
JBrowse link
G Pth parathyroid hormone ISO MGI:95560 (MGI:4849322|PMID:21048959) RGD PMID:21048959 MGI:4849322 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO MGI:3690333|MGI:96680 (MGI:5588640|PMID:24675817) RGD PMID:24675817 MGI:5588640 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:2180784 (MGI:5569596|PMID:23258346) RGD PMID:23258346 MGI:5569596 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac3 Rac family small GTPase 3 ISO MGI:97845 (MGI:5569596|PMID:23258346) RGD PMID:23258346 MGI:5569596 NCBI chr10:109,903,920...109,906,596
Ensembl chr10:109,904,259...109,906,232
JBrowse link
G Rpa1 replication protein A1 ISO MGI:3582609 (MGI:3581950|PMID:15965476) RGD PMID:15965476 MGI:3581950 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Sash3 SAM and SH3 domain containing 3 ISO MGI:3716944 (MGI:3607020|PMID:16227612) RGD PMID:16227612 MGI:3607020 NCBI chr  X:134,979,637...134,994,351
Ensembl chr  X:134,979,646...134,994,349
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISO
GO_REF:0000107
(MGI:5510940|PMID:23680462)
Ensembl
RGD
PMID:23680462 GO_REF:0000107, MGI:5510940 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:2429649 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tarp TCR gamma alternate reading frame protein ISO MGI:3046956 (MGI:3046412|PMID:15345225) RGD PMID:15345225 MGI:3046412 NCBI chr17:47,701,268...47,703,634 JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated ISO MGI:3526165 (MGI:3794139|PMID:18283110) RGD PMID:18283110 MGI:3794139 NCBI chr16:62,313,284...62,373,288
Ensembl chr16:62,313,263...62,373,253
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931048 (MGI:5461755|PMID:22886301) RGD PMID:22886301 MGI:5461755 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vps54 VPS54 subunit of GARP complex IEA
ISO
GO_REF:0000107
MGI:1857091 (MGI:82936|PMID:8815872)
Ensembl
RGD
PMID:8815872 GO_REF:0000107, MGI:82936 NCBI chr14:106,153,407...106,207,715
Ensembl chr14:106,153,575...106,207,658
JBrowse link
homeostasis of number of retina cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il17a interleukin 17A IEA
ISO
GO_REF:0000107
(MGI:5788042|PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107, MGI:5788042 NCBI chr 9:26,841,299...26,844,786
Ensembl chr 9:26,841,299...26,844,786
JBrowse link
G Inava innate immunity activator ISO (MGI:6119883|PMID:29420262) RGD PMID:29420262 MGI:6119883 NCBI chr13:53,088,438...53,108,713
Ensembl chr13:53,088,439...53,108,713
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
MGI:2429649 (MGI:3766658|PMID:17681175)
UniProt
RGD
PMID:17681175 GO_REF:0000024, MGI:3766658 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tlr4 toll-like receptor 4 IEA
ISO
GO_REF:0000107
(MGI:4421230|PMID:20051628)
Ensembl
RGD
PMID:20051628 GO_REF:0000107, MGI:4421230 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Zfp830 zinc finger protein 830 ISO MGI:4950703 (MGI:5428139|PMID:23213458) RGD PMID:23213458 MGI:5428139 NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
JBrowse link
maintenance of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:26830080 RGD:11041002 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Bdkrb2 bradykinin receptor B2 IDA RGD PMID:20080302 RGD:4891047 NCBI chr 6:129,399,468...129,429,676
Ensembl chr 6:129,399,468...129,429,676
JBrowse link
G Cldn5 claudin 5 ISO (PMID:28961379) RGD PMID:28961379 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Mbp myelin basic protein IEA
ISO
GO_REF:0000107
(PMID:22524708)
Ensembl
RGD
PMID:22524708 GO_REF:0000107 NCBI chr18:79,326,738...79,437,310
Ensembl chr18:79,326,738...79,437,310
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:6196220|PMID:30074985) RGD PMID:30074985 MGI:6196220 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IMP RGD PMID:17704356 RGD:2325928 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:17704356 RGD:2325928 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:6392927|PMID:28577991) RGD PMID:28577991 MGI:6392927 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (MGI:6393184|PMID:25350110) RGD PMID:25350110 MGI:6393184 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 ISO (MGI:6221361|PMID:27782176) RGD PMID:27782176 MGI:6221361 NCBI chr  X:20,316,081...20,459,245
Ensembl chr  X:20,316,893...20,454,357
JBrowse link
maintenance of gastrointestinal epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics IBA
ISO
PMID:21873635
(MGI:6271776|PMID:30361697)
RGD PMID:30361697, PMID:21873635 MGI:6271776, RGD:13792537 NCBI chr14:33,649,989...33,783,794
Ensembl chr14:33,649,637...33,677,031
JBrowse link
G Muc13 mucin 13, cell surface associated ISO (PMID:17058067) RGD PMID:17058067 NCBI chr11:70,185,757...70,223,012
Ensembl chr11:70,185,757...70,211,701
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming ISO (PMID:17058067) RGD PMID:17058067 NCBI chr 1:214,663,929...214,693,197 JBrowse link
G Muc4 mucin 4, cell surface associated ISO (PMID:17058067) RGD PMID:17058067 NCBI chr11:71,242,973...71,285,217
Ensembl chr11:71,243,334...71,284,939
JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:214,608,453...214,630,524
Ensembl chr 1:214,608,704...214,629,938
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (PMID:17058067) RGD PMID:17058067 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Pbld1 phenazine biosynthesis-like protein domain containing 1 ISO (PMID:17929853) RGD PMID:17929853 NCBI chr20:27,103,300...27,118,650
Ensembl chr20:27,103,317...27,117,663
JBrowse link
G Rbp4 retinol binding protein 4 ISO (PMID:10944490) RGD PMID:10944490 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Strap serine/threonine kinase receptor associated protein ISO (PMID:17929853) RGD PMID:17929853 NCBI chr 4:171,730,629...171,744,877
Ensembl chr 4:171,730,635...171,745,377
JBrowse link
G Tff1 trefoil factor 1 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:8836141, PMID:21873635 RGD:625375, RGD:13792537 NCBI chr20:9,892,124...9,895,984
Ensembl chr20:9,892,124...9,895,984
JBrowse link
G Tff2 trefoil factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,872,669...9,876,008
Ensembl chr20:9,872,680...9,876,008
JBrowse link
G Tff3 trefoil factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,850,800...9,855,481
Ensembl chr20:9,850,803...9,855,481
JBrowse link
G Tlr9 toll-like receptor 9 ISO (MGI:4399015|PMID:17128265) RGD PMID:17128265 MGI:4399015 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 IEA
ISO
IBA
GO_REF:0000002
MGI:5297726 (MGI:5297312|PMID:21991385)
PMID:21873635
InterPro
RGD
PMID:21991385, PMID:21873635 GO_REF:0000002, MGI:5297312, RGD:13792537 NCBI chr  X:112,268,786...112,303,849
Ensembl chr  X:112,270,986...112,303,846
JBrowse link
maintenance of lens transparency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B ISO (PMID:17701905) RGD PMID:17701905 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Foxc1 forkhead box C1 ISO (MGI:5314489|PMID:22171010) RGD PMID:22171010 MGI:5314489 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Gcnt2 glucosaminyl (N-acetyl) transferase 2 (I blood group) ISO (PMID:12424189) RGD PMID:12424189 NCBI chr17:21,634,546...21,677,477
Ensembl chr17:21,634,551...21,739,408
JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming ISO MGI:5295259 (MGI:5484972|PMID:23272068) RGD PMID:23272068 MGI:5484972 NCBI chr 1:214,725,482...214,756,653 JBrowse link
G Stk39 serine threonine kinase 39 ISO (MGI:5766617|PMID:25515571) RGD PMID:25515571 MGI:5766617 NCBI chr 3:54,359,449...54,625,702
Ensembl chr 3:54,359,451...54,625,414
JBrowse link
negative regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:18854840 RGD:2325137 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ISO (PMID:24854121) RGD PMID:24854121 NCBI chr 5:103,479,767...103,654,507
Ensembl chr 5:103,479,767...103,654,247
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:19148554) RGD PMID:19148554 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
negative regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin-related polypeptide alpha ISO (PMID:10822112), (PMID:17241109) RGD PMID:10822112, PMID:17241109 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Cartpt CART prepropeptide ISO (PMID:16614075)
UniProtKB:P56450 (MGI:3696590|PMID:16614075)
RGD PMID:16614075 MGI:3696590 NCBI chr 2:30,125,249...30,127,408
Ensembl chr 2:30,125,249...30,127,269
JBrowse link
G Cd38 CD38 molecule IDA RGD PMID:10477767 RGD:2307268 NCBI chr14:71,714,768...71,754,990
Ensembl chr14:71,715,269...71,754,672
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:5560663 (MGI:5691608|PMID:25490771) RGD PMID:25490771 MGI:5691608 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cldn18 claudin 18 ISO MGI:5007067 (MGI:5489769|PMID:22437732) RGD PMID:22437732 MGI:5489769 NCBI chr 8:107,933,725...107,960,656
Ensembl chr 8:107,934,860...107,952,530
JBrowse link
G Csk C-terminal Src kinase IDA RGD PMID:10411542 RGD:5134371 NCBI chr 8:62,405,714...62,424,707
Ensembl chr 8:62,405,715...62,424,303
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IMP RGD PMID:8694895 RGD:7257714 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Fshr follicle stimulating hormone receptor ISO MGI:2384087 (MGI:1926755|PMID:11089565), (MGI:3769858|PMID:17332067) RGD PMID:11089565, PMID:17332067 MGI:1926755, MGI:3769858 NCBI chr 6:12,796,383...12,997,817
Ensembl chr 6:12,796,383...12,997,817
JBrowse link
G Gpr137 G protein-coupled receptor 137 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,194,266...222,197,252
Ensembl chr 1:222,194,266...222,197,252
JBrowse link
G Gpr137b G protein-coupled receptor 137B IBA
ISO
PMID:21873635
(MGI:6362357|PMID:31173907)
RGD PMID:31173907, PMID:21873635 MGI:6362357, RGD:13792537 NCBI chr17:90,670,852...90,709,003
Ensembl chr17:90,670,872...90,746,804
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO MGI:4351741 (MGI:5581387|PMID:24561287) RGD PMID:24561287 MGI:5581387 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Iapp islet amyloid polypeptide ISO MGI:2656235 (MGI:3037515|PMID:14970190) RGD PMID:14970190 MGI:3037515 NCBI chr 4:176,509,863...176,517,903
Ensembl chr 4:176,510,696...176,516,083
JBrowse link
G Il6 interleukin 6 ISO (MGI:5795829|PMID:11159963) RGD PMID:11159963 MGI:5795829 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IEA
ISO
GO_REF:0000107
MGI:2386884 (MGI:2386137|PMID:12161749)
Ensembl
RGD
PMID:12161749 GO_REF:0000107, MGI:2386137 NCBI chr 9:94,745,220...94,850,778
Ensembl chr 9:94,745,217...94,850,771
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:2667237|PMID:12677010) RGD PMID:12677010 MGI:2667237 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Tmem119 transmembrane protein 119 ISO (MGI:5543589|PMID:22416756) RGD PMID:22416756 MGI:5543589 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B IMP
IDA
RGD PMID:11839361, PMID:16912914 RGD:730196, RGD:1624170 NCBI chr 7:93,798,580...93,826,586
Ensembl chr 7:93,798,545...93,826,665
JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing, B IBA
ISO
PMID:21873635
(MGI:5619442|PMID:23149425)
RGD PMID:23149425, PMID:21873635 MGI:5619442, RGD:13792537 NCBI chr 8:45,224,053...45,375,450
Ensembl chr 8:45,223,992...45,375,435
JBrowse link
G Vegfa vascular endothelial growth factor A IMP RGD PMID:15312247 RGD:1580559 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 ISO MGI:1857860 (MGI:2136674|PMID:11431429) RGD PMID:11431429 MGI:2136674 NCBI chr 2:225,645,539...225,783,288
Ensembl chr 2:225,645,568...225,783,287
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (PMID:14740321) RGD PMID:14740321 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 IEA
ISO
GO_REF:0000107
(MGI:69165|PMID:7525597)
Ensembl
RGD
PMID:7525597 GO_REF:0000107, MGI:69165 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 7:54,030,229...54,034,354
Ensembl chr 7:54,031,316...54,034,350
JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 IBA
ISO
PMID:21873635
MGI:5444297 (MGI:5444069|PMID:22958920), (MGI:5462139|PMID:22869374)
RGD PMID:22869374, PMID:22958920, PMID:21873635 MGI:5444069, MGI:5462139, RGD:13792537 NCBI chr 2:124,048,513...124,057,026
Ensembl chr 2:124,054,282...124,056,795
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO MGI:3521669 (MGI:3512844|PMID:15539463) RGD PMID:15539463 MGI:3512844 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO MGI:2384917|MGI:3045473|MGI:3055492 (MGI:3717936|PMID:17591906), (MGI:3784949|PMID:16794820), (MGI:4940001|PMID:20398886), (MGI:4949555|PMID:21444805), (MGI:5525015|PMID:23943788) RGD PMID:16794820, PMID:17591906, PMID:20398886, PMID:21444805, PMID:23943788 MGI:3717936, MGI:3784949, MGI:4940001, MGI:4949555, MGI:5525015 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Bsg basigin (Ok blood group) ISO
ISS
(PMID:25957687)
(MGI:6436439|PMID:25957687)
GO_REF:0000024
RGD
UniProt
PMID:25957687 GO_REF:0000024, MGI:6436439 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cdh23 cadherin-related 23 ISO
IEA
(PMID:16679490)
GO_REF:0000107
RGD
Ensembl
PMID:16679490 GO_REF:0000107 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Cdhr1 cadherin-related family member 1 ISO (PMID:20805371)
MGI:3046299 (MGI:2154844|PMID:11738025)
RGD PMID:11738025, PMID:20805371 MGI:2154844 NCBI chr16:14,328,161...14,348,049
Ensembl chr16:14,328,160...14,348,046
JBrowse link
G Cep290 centrosomal protein 290 ISO MGI:2143311|MGI:3624136 (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327
JBrowse link
G Cib2 calcium and integrin binding family member 2 ISS
ISO
GO_REF:0000024
(MGI:5487486|PMID:23023331)
UniProt
RGD
PMID:23023331 GO_REF:0000024, MGI:5487486 NCBI chr 8:59,123,078...59,139,946
Ensembl chr 8:59,123,079...59,139,946
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO MGI:2183297 (MGI:2182197|PMID:11182090) RGD PMID:11182090 MGI:2182197 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein ISO MGI:1856959 (MGI:1096072|PMID:9151333), (MGI:3695117|PMID:15565184) RGD PMID:9151333, PMID:15565184 MGI:1096072, MGI:3695117 NCBI chr16:79,828,321...79,838,212
Ensembl chr16:79,828,324...79,838,212
JBrowse link
G Clrn1 clarin 1 ISO
IEA
(PMID:15521980)
GO_REF:0000107
RGD
Ensembl
PMID:15521980 GO_REF:0000107 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295) RGD PMID:17234588, PMID:25147295 MGI:3696487, MGI:5608935 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin ISO MGI:3580447 (MGI:3580205|PMID:15870283) RGD PMID:15870283 MGI:3580205 NCBI chr 5:159,540,453...159,583,194
Ensembl chr 5:159,540,421...159,583,049
JBrowse link
G Dram2 DNA-damage regulated autophagy modulator 2 ISO
ISS
(PMID:25983245)
(MGI:5705208|PMID:25983245)
GO_REF:0000024
RGD
UniProt
PMID:25983245 GO_REF:0000024, MGI:5705208 NCBI chr 2:209,160,901...209,189,641
Ensembl chr 2:209,161,047...209,188,622
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:1932102 (MGI:3699047|PMID:17145777) RGD PMID:17145777 MGI:3699047 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Esrrb estrogen-related receptor beta ISS
ISO
GO_REF:0000024
(MGI:4457950|PMID:20534447)
UniProt
RGD
PMID:20534447 GO_REF:0000024, MGI:4457950 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Iqcb1 IQ motif containing B1 ISO (PMID:15723066) RGD PMID:15723066 NCBI chr11:66,824,059...66,878,585
Ensembl chr11:66,824,065...66,878,551
JBrowse link
G Lca5 lebercilin LCA5 ISS
ISO
GO_REF:0000024
(MGI:5050784|PMID:21606596)
UniProt
RGD
PMID:21606596 GO_REF:0000024, MGI:5050784 NCBI chr 8:90,926,309...90,984,271
Ensembl chr 8:90,926,311...90,984,224
JBrowse link
G Mak male germ cell-associated kinase ISS
ISO
GO_REF:0000024
MGI:2179972 (MGI:5298333|PMID:21148103)
UniProt
RGD
PMID:21148103 GO_REF:0000024, MGI:5298333 NCBI chr17:21,531,651...21,567,742
Ensembl chr17:21,521,505...21,568,440
JBrowse link
G Map1a microtubule-associated protein 1A ISO MGI:109571|MGI:2651573 (MGI:5489838|PMID:22323461) RGD PMID:22323461 MGI:5489838 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Mdm1 Mdm1 nuclear protein ISO MGI:2664155 (MGI:3822263|PMID:18805803) RGD PMID:18805803 MGI:3822263 NCBI chr 7:61,165,652...61,200,865
Ensembl chr 7:61,165,640...61,200,879
JBrowse link
G Mkks McKusick-Kaufman syndrome ISO MGI:3526444|MGI:3608879 (MGI:3581923|PMID:15772095), (MGI:3607949|PMID:16170314) RGD PMID:15772095, PMID:16170314 MGI:3581923, MGI:3607949 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Nphp3 nephrocystin 3 ISO (PMID:12872122) RGD PMID:12872122 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Nphp4 nephrocystin 4 ISO MGI:3032515 (MGI:4867588|PMID:21078623) RGD PMID:21078623 MGI:4867588 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660
JBrowse link
G Nxnl1 nucleoredoxin-like 1 ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)
RGD PMID:25957687 MGI:6436439 NCBI chr16:19,992,211...19,996,815
Ensembl chr16:19,992,984...19,996,836
JBrowse link
G Nxnl2 nucleoredoxin-like 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,053,896...14,058,642
Ensembl chr17:14,053,896...14,058,642
JBrowse link
G Pcdh15 protocadherin related 15 ISO (PMID:11398101) RGD PMID:11398101 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pde6a phosphodiesterase 6A ISO MGI:4867884 (MGI:5587955|PMID:22183357) RGD PMID:22183357 MGI:5587955 NCBI chr18:56,544,652...56,617,480
Ensembl chr18:56,544,652...56,617,480
JBrowse link
G Prom1 prominin 1 ISO
IBA
(PMID:18654668)
PMID:21873635
RGD PMID:18654668, PMID:21873635 RGD:13792537 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Rho rhodopsin IEA
ISO
GO_REF:0000107
MGI:5609882 (MGI:5587955|PMID:22183357)
Ensembl
RGD
PMID:22183357 GO_REF:0000107, MGI:5587955 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO (MGI:3604930|PMID:16126734) RGD PMID:16126734 MGI:3604930 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508
JBrowse link
G Rp1l1 RP1 like 1 ISO (PMID:23281133)
(MGI:4353917|PMID:19657028)
RGD PMID:19657028, PMID:23281133 MGI:4353917 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Spata7 spermatogenesis associated 7 IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:5608598|PMID:25398945)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25398945, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:5608598, RGD:13792537 NCBI chr 6:122,603,248...122,648,718
Ensembl chr 6:122,603,269...122,648,699
JBrowse link
G Tub TUB bipartite transcription factor ISO MGI:1857081 (MGI:1352376|PMID:10629044) RGD PMID:10629044 MGI:1352376 NCBI chr 1:173,550,929...173,629,550
Ensembl chr 1:173,607,101...173,625,550
JBrowse link
G Tulp1 TUB like protein 1 ISO MGI:1857081|MGI:1859921|MGI:4867883 (MGI:1352266|PMID:10607826), (MGI:2388540|PMID:10549638), (MGI:3717940|PMID:17525220), (MGI:4397555|PMID:19218615), (MGI:5587955|PMID:22183357) RGD PMID:10549638, PMID:10607826, PMID:17525220, PMID:19218615, PMID:22183357 MGI:1352266, MGI:2388540, MGI:3717940, MGI:4397555, MGI:5587955 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
G Ush1c USH1 protein network component harmonin ISO (PMID:11398101) RGD PMID:11398101 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Ush1g USH1 protein network component sans ISO (PMID:11398101) RGD PMID:11398101 NCBI chr10:103,866,566...103,873,416
Ensembl chr10:103,869,377...103,873,246
JBrowse link
G Ush2a usherin ISO (PMID:10090909)
MGI:3702040 (MGI:3700725|PMID:17360538)
RGD PMID:10090909, PMID:17360538 MGI:3700725 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329
JBrowse link
G Usp45 ubiquitin specific peptidase 45 ISO (MGI:6383248|PMID:30573563) RGD PMID:30573563 MGI:6383248 NCBI chr 5:35,916,763...35,984,525
Ensembl chr 5:35,916,804...35,984,524
JBrowse link
positive regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 ISO
IEA
(PMID:19148554)
GO_REF:0000107
RGD
Ensembl
PMID:19148554 GO_REF:0000107 NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206
JBrowse link
G Ocln occludin ISO (PMID:24854121) RGD PMID:24854121 NCBI chr 2:30,527,327...30,577,218
Ensembl chr 2:30,527,715...30,577,218
JBrowse link
G Tjp1 tight junction protein 1 ISO
IBA
(PMID:24854121)
PMID:21873635
RGD PMID:24854121, PMID:21873635 RGD:13792537 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
G Tjp2 tight junction protein 2 ISO
IBA
(PMID:19148554)
PMID:21873635
RGD PMID:19148554, PMID:21873635 RGD:13792537 NCBI chr 1:241,945,816...242,084,044
Ensembl chr 1:241,945,841...242,083,484
JBrowse link
G Tjp3 tight junction protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,295,892...11,314,535
Ensembl chr 7:11,295,892...11,315,615
JBrowse link
positive regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 ISO (MGI:5009189|PMID:11341326), (MGI:5009349|PMID:20683884) RGD PMID:11341326, PMID:20683884 MGI:5009189, MGI:5009349 NCBI chr 1:212,317,510...212,332,895
Ensembl chr 1:212,317,848...212,330,349
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IMP RGD PMID:10500999 RGD:1625797 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5575464|PMID:22467241)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22467241 GO_REF:0000024, GO_REF:0000107, MGI:5575464 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Car2 carbonic anhydrase 2 IMP RGD PMID:8674544 RGD:1600722 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein ISO (MGI:3588832|PMID:16061724), (MGI:5426134|PMID:17164993), (MGI:5426135|PMID:16937266) RGD PMID:16061724, PMID:16937266, PMID:17164993 MGI:3588832, MGI:5426134, MGI:5426135 NCBI chr 7:78,642,016...78,651,763
Ensembl chr 7:78,649,875...78,650,906
JBrowse link
G Def8 differentially expressed in FDCP 8 homolog ISS
ISO
GO_REF:0000024
(MGI:5806241|PMID:27777970)
UniProt
RGD
PMID:27777970 GO_REF:0000024, MGI:5806241 NCBI chr19:56,238,353...56,259,867
Ensembl chr19:56,243,408...56,259,196
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO MGI:3526402 (MGI:5780798|PMID:21308776) RGD PMID:21308776 MGI:5780798 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Egfr epidermal growth factor receptor IMP RGD PMID:2981075 RGD:10395245 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa ISO (MGI:5641770|PMID:25824719) RGD PMID:25824719 MGI:5641770 NCBI chr13:89,385,775...89,396,047
Ensembl chr13:89,385,859...89,396,051
JBrowse link
G Fshb follicle stimulating hormone subunit beta ISO MGI:1857434 (MGI:3692338|PMID:16630814) RGD PMID:16630814 MGI:3692338 NCBI chr 3:98,088,321...98,092,131
Ensembl chr 3:98,088,324...98,092,131
JBrowse link
G Idua alpha-L-iduronidase ISO MGI:2176236 (MGI:4397742|PMID:19834056) RGD PMID:19834056 MGI:4397742 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Itgb3 integrin subunit beta 3 IMP RGD PMID:8603604 RGD:5024929 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:2673982 (MGI:4365357|PMID:18505367) RGD PMID:18505367 MGI:4365357 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO MGI:2180017 (MGI:3719740|PMID:15878314) RGD PMID:15878314 MGI:3719740 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Mc4r melanocortin 4 receptor ISO (PMID:16614075)
(MGI:3696590|PMID:16614075)
RGD PMID:16614075 MGI:3696590 NCBI chr18:62,612,838...62,614,725
Ensembl chr18:62,612,838...62,614,725
JBrowse link
G Oscar osteoclast associated Ig-like receptor ISO (MGI:2178877|PMID:11805147) RGD PMID:11805147 MGI:2178877 NCBI chr 1:64,182,174...64,188,658
Ensembl chr 1:64,182,422...64,188,658
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 ISS
ISO
GO_REF:0000024
(MGI:5806241|PMID:27777970)
UniProt
RGD
PMID:27777970 GO_REF:0000024, MGI:5806241 NCBI chr10:91,451,890...91,500,675
Ensembl chr10:91,451,865...91,500,661
JBrowse link
G Ppargc1b PPARG coactivator 1 beta ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr18:56,626,725...56,650,524
Ensembl chr18:56,626,712...56,728,968
JBrowse link
G Prkca protein kinase C, alpha ISO (MGI:5284791|PMID:16014375) RGD PMID:16014375 MGI:5284791 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:11792579 RGD:729815 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Spp1 secreted phosphoprotein 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11792563, PMID:21873635 RGD:1581129, RGD:13792537 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Syk spleen associated tyrosine kinase IEA
ISO
ISS
GO_REF:0000107
(MGI:3703840|PMID:17353363)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17353363 GO_REF:0000024, GO_REF:0000107, MGI:3703840 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
G Tf transferrin ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr 8:111,694,570...111,721,275
Ensembl chr 8:111,673,547...111,721,333
JBrowse link
G Tfrc transferrin receptor ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr11:71,397,423...71,419,263
Ensembl chr11:71,397,383...71,419,223
JBrowse link
G Tmem64 transmembrane protein 64 ISO MGI:3880885 (MGI:5495340|PMID:23395171) RGD PMID:23395171 MGI:5495340 NCBI chr 5:28,850,864...28,898,203
Ensembl chr 5:28,850,950...28,867,227
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A IBA
ISO
PMID:21873635
(MGI:2178877|PMID:11805147)
RGD PMID:11805147, PMID:21873635 MGI:2178877, RGD:13792537 NCBI chr13:25,778,306...25,835,802
Ensembl chr13:25,778,317...25,835,957
JBrowse link
G Tnfsf11 TNF superfamily member 11 IMP
ISO
(PMID:17241109) RGD PMID:17241109, PMID:11092398 RGD:730134 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
positive regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 ISO
IEA
(PMID:18005709)
GO_REF:0000107
RGD
Ensembl
PMID:18005709 GO_REF:0000107 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
regulation of apoptosis involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdx5 peroxiredoxin 5 ISO (PMID:15276323) RGD PMID:15276323 NCBI chr 1:222,164,462...222,167,447
Ensembl chr 1:222,164,462...222,167,447
JBrowse link
regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calcr calcitonin receptor NOT ISO MGI:3038975 (MGI:3037515|PMID:14970190) RGD PMID:14970190 MGI:3037515 NCBI chr 4:28,627,439...28,702,559
Ensembl chr 4:28,627,442...28,702,559
JBrowse link
G Car2 carbonic anhydrase 2 TAS RGD PMID:9665810 RGD:1342423 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP PMID:17121910 UniProt PMID:17121910 RGD:2293713 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Gpr137 G protein-coupled receptor 137 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,194,266...222,197,252
Ensembl chr 1:222,194,266...222,197,252
JBrowse link
G Il20ra interleukin 20 receptor subunit alpha ISO MGI:5302406 (MGI:5296273|PMID:21844205) RGD PMID:21844205 MGI:5296273 NCBI chr 1:15,180,328...15,222,785
Ensembl chr 1:15,180,328...15,222,785
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS
GO_REF:0000107
MGI:1857478 (MGI:3689489|PMID:17053831)
GO_REF:0000024
Ensembl
RGD
HGNC
PMID:17053831 GO_REF:0000024, GO_REF:0000107, MGI:3689489 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 IEA
ISO
GO_REF:0000107
(MGI:5303050|PMID:21803180)
Ensembl
RGD
PMID:21803180 GO_REF:0000107, MGI:5303050 NCBI chr 4:30,546,772...30,556,774
Ensembl chr 4:30,546,664...30,556,814
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISS
ISO
GO_REF:0000024
(MGI:3839226|PMID:19204730)
UniProt
RGD
PMID:19204730 GO_REF:0000024, MGI:3839226 NCBI chr 2:218,654,406...218,658,761
Ensembl chr 2:218,654,554...218,658,761
JBrowse link
G Siglec15 sialic acid binding Ig-like lectin 15 IBA
ISO
PMID:21873635
(MGI:5467208|PMID:22451653)
RGD PMID:22451653, PMID:21873635 MGI:5467208, RGD:13792537 NCBI chr18:74,403,384...74,417,333
Ensembl chr18:74,403,384...74,417,333
JBrowse link
regulation of cell proliferation involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
MGI:2385468|MGI:3053819 (MGI:3830946|PMID:17698607)
UniProt
RGD
PMID:17698607 GO_REF:0000024, MGI:3830946 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 ISS
ISO
GO_REF:0000024
(MGI:5009210|PMID:9512516)
UniProt
RGD
PMID:9512516 GO_REF:0000024, MGI:5009210 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
retina homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr12:13,715,843...13,718,813
Ensembl chr12:13,715,843...13,718,841
JBrowse link
G Actg1 actin, gamma 1 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 ISO MGI:3054784|MGI:3054793 (MGI:3054118|PMID:15365173), (MGI:3054134|PMID:15365178) RGD PMID:15365173, PMID:15365178 MGI:3054118, MGI:3054134 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Alb albumin ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 ISO (MGI:2159503|PMID:8793730) RGD PMID:8793730 MGI:2159503 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr12:19,196,565...19,203,094
Ensembl chr12:19,196,611...19,202,647
JBrowse link
G B2m beta-2 microglobulin ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO MGI:3055491 (MGI:3055247|PMID:15322545) RGD PMID:15322545 MGI:3055247 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO MGI:3045473|MGI:3055492 (MGI:3044824|PMID:15173597), (MGI:3055247|PMID:15322545) RGD PMID:15173597, PMID:15322545 MGI:3044824, MGI:3055247 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (PMID:19777273) RGD PMID:19777273 NCBI chr16:3,107,119...3,139,188
Ensembl chr16:3,110,239...3,139,177
JBrowse link
G Cdh3 cadherin 3 ISO (PMID:23143461) RGD PMID:23143461 NCBI chr19:38,668,957...38,719,801
Ensembl chr19:38,669,230...38,719,677
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
G Igkc immunoglobulin kappa constant ISO (PMID:23580065) UniProtKB PMID:23580065
G Jchain joining chain of multimeric IgA and IgM ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr14:21,176,841...21,183,731
Ensembl chr14:21,177,237...21,183,542
JBrowse link
G Krt1 keratin 1 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 7:143,448,318...143,453,544
Ensembl chr 7:143,448,318...143,453,544
JBrowse link
G Lcn1 lipocalin 1 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 3:4,233,111...4,236,960
Ensembl chr 3:4,233,111...4,236,960
JBrowse link
G Ltf lactotransferrin ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Lyz2 lysozyme 2 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 7:60,335,968...60,341,264
Ensembl chr 7:60,335,969...60,341,264
JBrowse link
G Oprpn opiorphin prepropeptide ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr14:21,338,464...21,353,533
Ensembl chr14:21,338,601...21,352,491
JBrowse link
G Pigr polymeric immunoglobulin receptor ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr13:47,564,176...47,592,093
Ensembl chr13:47,572,219...47,591,699
JBrowse link
G Pip prolactin induced protein ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 4:71,320,859...71,325,153
Ensembl chr 4:71,320,859...71,325,153
JBrowse link
G Poc1b POC1 centriolar protein B IEA
ISO
GO_REF:0000107
(PMID:25044745)
Ensembl
RGD
PMID:25044745 GO_REF:0000107 NCBI chr 7:41,304,119...41,404,360
Ensembl chr 7:41,304,440...41,404,370
JBrowse link
G Potef POTE ankyrin domain family, member F ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr18:24,780,521...24,783,147
Ensembl chr 3:75,643,054...75,644,954
JBrowse link
G Prdx1 peroxiredoxin 1 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 5:135,536,413...135,551,986
Ensembl chr 5:135,536,413...135,551,990
JBrowse link
G Prr4 proline rich 4 ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 4:167,419,911...167,485,225
Ensembl chr 4:167,351,697...167,485,225
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Slc28a2 solute carrier family 28 member 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16487924, PMID:21873635 RGD:2317453, RGD:13792537 NCBI chr 3:114,355,003...114,647,382
Ensembl chr 3:114,355,798...114,647,382
JBrowse link
G Slc28a3 solute carrier family 28 member 3 IDA RGD PMID:16487924 RGD:2317453 NCBI chr17:6,459,024...6,509,761
Ensembl chr17:6,459,056...6,509,799
JBrowse link
G Sod1 superoxide dismutase 1 ISS
ISO
GO_REF:0000024
MGI:1857873 (MGI:3654862|PMID:16844785)
UniProt
RGD
PMID:16844785 GO_REF:0000024, MGI:3654862 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Tf transferrin ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr 8:111,694,570...111,721,275
Ensembl chr 8:111,673,547...111,721,333
JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
G Wdr36 WD repeat domain 36 ISO (MGI:4822532|PMID:20631153) RGD PMID:20631153 MGI:4822532 NCBI chr18:25,637,475...25,665,801
Ensembl chr18:25,637,588...25,665,639
JBrowse link
G Whrn whirlin ISO
IEA
ISS
(PMID:17171570)
(MGI:4454934|PMID:20502675)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17171570, PMID:20502675 GO_REF:0000024, GO_REF:0000107, MGI:4454934 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link
G Zg16b zymogen granule protein 16B ISO (PMID:23580065) UniProtKB PMID:23580065 NCBI chr10:13,320,716...13,325,134
Ensembl chr10:13,311,789...13,324,536
JBrowse link
surfactant homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006691.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:248,428,099...248,463,139 JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 NOT ISO MGI:3528440 (MGI:3829841|PMID:18957418)
MGI:3809668 (MGI:3807143|PMID:18632686)
RGD PMID:18632686, PMID:18957418 MGI:3807143, MGI:3829841 NCBI chr 9:78,521,477...78,693,421
Ensembl chr 9:78,522,464...78,693,028
JBrowse link
G Adgrf5 adhesion G protein-coupled receptor F5 IEA
ISO
GO_REF:0000107
MGI:5490511 (MGI:5490383|PMID:23684610), (MGI:5641462|PMID:23590306), (MGI:5919853|PMID:28806758)
Ensembl
RGD
PMID:23590306, PMID:23684610, PMID:28806758 GO_REF:0000107, MGI:5490383, MGI:5641462, MGI:5919853 NCBI chr 9:20,091,121...20,195,706
Ensembl chr 9:20,091,099...20,195,566
JBrowse link
G Ctsh cathepsin H IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18216060)
Ensembl
UniProt
RGD
PMID:18216060 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:97,439,155...97,458,293
Ensembl chr 8:97,439,161...97,458,287
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEA
ISO
GO_REF:0000107
MGI:2663583 (MGI:2181852|PMID:12053176)
Ensembl
RGD
PMID:12053176 GO_REF:0000107, MGI:2181852 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:17545485 RGD:2289988 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Fgf7 fibroblast growth factor 7 IMP RGD PMID:11316745 RGD:68696 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Itgb6 integrin subunit beta 6 ISO MGI:1926484 (MGI:3819065|PMID:17641300) RGD PMID:17641300 MGI:3819065 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Kdr kinase insert domain receptor ISO (MGI:2181852|PMID:12053176) RGD PMID:12053176 MGI:2181852 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 ISO (MGI:4460850|PMID:20018880) RGD PMID:20018880 MGI:4460850 NCBI chr 1:32,379,431...32,429,917
Ensembl chr 1:32,379,432...32,429,917
JBrowse link
G Napsa napsin A aspartic peptidase ISO (PMID:18216060) RGD PMID:18216060 NCBI chr 1:100,577,497...100,589,802
Ensembl chr 1:100,577,056...100,589,836
JBrowse link
G Pla2g4a phospholipase A2 group IVA IMP RGD PMID:10025671 RGD:1642480 NCBI chr13:67,062,252...67,206,688
Ensembl chr13:66,988,937...67,206,693
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO MGI:2154515 (MGI:3042805|PMID:15162506) RGD PMID:15162506 MGI:3042805 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Rcn3 reticulocalbin 3 IEA
ISO
ISS
GO_REF:0000107
(MGI:6201885|PMID:26252542)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26252542 GO_REF:0000024, GO_REF:0000107, MGI:6201885 NCBI chr 1:101,076,971...101,086,198
Ensembl chr 1:101,076,898...101,086,198
JBrowse link
G Sftpd surfactant protein D IMP
IBA
ISS
ISO
IEA
PMID:21873635
GO_REF:0000024
(PMID:9751757)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9751757, PMID:10666121, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:4144056, RGD:13792537 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO MGI:1857671 (MGI:3819065|PMID:17641300) RGD PMID:17641300 MGI:3819065 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931047 (MGI:2181852|PMID:12053176) RGD PMID:12053176 MGI:2181852 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      multicellular organismal homeostasis 552
        tissue homeostasis 283
          amnioserosa maintenance 0
          bone resorption + 79
          cartilage homeostasis 5
          chemical homeostasis within a tissue + 19
          compartment boundary maintenance 0
          epithelial structure maintenance + 28
          homeostasis of number of cells within a tissue + 41
          maintenance of blood-brain barrier + 18
          maintenance of lens transparency + 5
          retina homeostasis + 77
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological quality 4280
        homeostatic process 2076
          multicellular organismal homeostasis 552
            tissue homeostasis 283
              amnioserosa maintenance 0
              bone resorption + 79
              cartilage homeostasis 5
              chemical homeostasis within a tissue + 19
              compartment boundary maintenance 0
              epithelial structure maintenance + 28
              homeostasis of number of cells within a tissue + 41
              maintenance of blood-brain barrier + 18
              maintenance of lens transparency + 5
              retina homeostasis + 77
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.