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ONTOLOGY REPORT - ANNOTATIONS


Term:lymphangiogenesis
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Accession:GO:0001946 term browser browse the term
Definition:Lymph vessel formation when new vessels emerge from the proliferation of pre-existing vessels.
Synonyms:exact_synonym: lymph vessel formation
 xref: Wikipedia:Lymphangiogenesis


show annotations for term's descendants           Sort by:
 
lymphangiogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B ISO
IEA
(MGI:MGI:4436974|PMID:19903896)
GO_REF:0000107
RGD
Ensembl
PMID:19903896 GO_REF:0000107, MGI:MGI:4436974 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO (MGI:MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:MGI:4436974 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:MGI:4436974 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 ISO
IEA
MGI:MGI:5007046 (MGI:MGI:5432672|PMID:21778431)
GO_REF:0000107
(PMID:19935664)
RGD
Ensembl
PMID:19935664, PMID:21778431 GO_REF:0000107, MGI:MGI:5432672 NCBI chr18:61,758,754...62,013,194
Ensembl chr18:61,759,289...61,788,863
JBrowse link
G Clec14a C-type lectin domain containing 14A ISO MGI:MGI:6404416 (MGI:MGI:5881854|PMID:27991863) RGD PMID:27991863 MGI:MGI:5881854 NCBI chr 6:79,303,301...79,306,443
Ensembl chr 6:79,303,304...79,306,443
JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5294901|PMID:20697430)
(PMID:19779139)
Ensembl
UniProt
RGD
PMID:19779139, PMID:20697430 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5294901 NCBI chr10:35,078,782...35,120,296
Ensembl chr10:35,078,726...35,121,599
JBrowse link
G Foxc2 forkhead box C2 ISO (PMID:12114478) RGD PMID:12114478 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 ISO MGI:MGI:103178|MGI:MGI:107163 (MGI:MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:MGI:3848105 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
G Pdpn podoplanin ISO
ISS
MGI:MGI:2657021 (MGI:MGI:3522394|PMID:12853470)
GO_REF:0000024
RGD
UniProt
PMID:12853470 GO_REF:0000024, MGI:MGI:3522394 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta ISO
IEA
MGI:MGI:102469|MGI:MGI:103178 (MGI:MGI:3848104|PMID:19233846)
GO_REF:0000107
RGD
Ensembl
PMID:19233846 GO_REF:0000107, MGI:MGI:3848104 NCBI chr15:4,209,702...4,236,895
Ensembl chr15:4,209,703...4,236,895
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:12412020) RGD PMID:12412020 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptpn14 protein tyrosine phosphatase, non-receptor type 14 ISO
IBA
(PMID:20826270)
PMID:21873635
(MGI:MGI:4939987|PMID:20826270)
RGD PMID:20826270, PMID:21873635 MGI:MGI:4939987, RGD:13792537 NCBI chr13:108,689,916...108,841,593
Ensembl chr13:108,696,336...108,841,511
JBrowse link
G Sox18 SRY-box transcription factor 18 ISO
IBA
MGI:MGI:2178809 (MGI:MGI:3828192|PMID:18931657)
PMID:21873635
(PMID:12740761)
RGD PMID:12740761, PMID:18931657, PMID:21873635 MGI:MGI:3828192, RGD:13792537 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:MGI:102469|MGI:MGI:107163 (MGI:MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:MGI:3848105 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 ISO MGI:MGI:2181762 (MGI:MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:MGI:3848105 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
negative regulation of lymphangiogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 ISO MGI:MGI:3040415 (MGI:MGI:3847147|PMID:19443703) RGD PMID:19443703 MGI:MGI:3847147 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Foxc1 forkhead box C1 ISO (MGI:MGI:5314489|PMID:22171010) RGD PMID:22171010 MGI:MGI:5314489 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Vash1 vasohibin 1 ISO UniProtKB:P97953|UniProtKB:Q00731 (PMID:20133819) RGD PMID:20133819 NCBI chr 6:110,624,377...110,640,942
Ensembl chr 6:110,624,856...110,637,382
JBrowse link
positive regulation of lymphangiogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccbe1 collagen and calcium binding EGF domains 1 ISO (MGI:MGI:5568630|PMID:24552833) RGD PMID:24552833 MGI:MGI:5568630 NCBI chr18:61,758,754...62,013,194
Ensembl chr18:61,759,289...61,788,863
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:4439256|PMID:20133819) RGD PMID:20133819 MGI:MGI:4439256 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vegfc vascular endothelial growth factor C ISO (MGI:MGI:4439256|PMID:20133819), (MGI:MGI:5568630|PMID:24552833) RGD PMID:20133819, PMID:24552833 MGI:MGI:4439256, MGI:MGI:5568630 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure morphogenesis 2872
        lymphangiogenesis 18
          branching involved in lymph vessel morphogenesis 1
          negative regulation of lymphangiogenesis 3
          positive regulation of lymphangiogenesis 3
          regulation of lymphangiogenesis + 6
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            circulatory system development 1224
              vasculature development 772
                lymph vessel development 29
                  lymph vessel morphogenesis 22
                    lymphangiogenesis 18
                      branching involved in lymph vessel morphogenesis 1
                      negative regulation of lymphangiogenesis 3
                      positive regulation of lymphangiogenesis 3
                      regulation of lymphangiogenesis + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.