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ONTOLOGY REPORT - ANNOTATIONS


Term:morphogenesis of an epithelial sheet
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Accession:GO:0002011 term browser browse the term
Definition:The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells.


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morphogenesis of an epithelial sheet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap12 Rho GTPase activating protein 12 ISO (PMID:23201090) RGD PMID:23201090 NCBI chr17:54,280,815...54,394,716
Ensembl chr17:54,280,851...54,394,634
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex ISO MGI:MGI:3045616 (MGI:MGI:3042351|PMID:14960276) RGD PMID:14960276 MGI:MGI:3042351 NCBI chr 1:263,848,829...263,884,354
Ensembl chr 1:263,848,884...263,885,169
JBrowse link
G Dag1 dystroglycan 1 ISO (MGI:MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:MGI:2156962 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Hoxb2 homeobox B2 ISO MGI:MGI:96185 (MGI:MGI:2149906|PMID:11518511) RGD PMID:11518511 MGI:MGI:2149906 NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688
JBrowse link
G Hoxb4 homeo box B4 ISO MGI:MGI:96183 (MGI:MGI:2149906|PMID:11518511) RGD PMID:11518511 MGI:MGI:2149906 NCBI chr10:84,167,331...84,169,913
Ensembl chr10:84,167,331...84,169,907
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO
IEA
MGI:MGI:1857713 (MGI:MGI:2158685|PMID:11861489)
GO_REF:0000107
RGD
Ensembl
PMID:11861489 GO_REF:0000107, MGI:MGI:2158685 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Lama1 laminin subunit alpha 1 ISO MGI:MGI:3530455 (MGI:MGI:2156962|PMID:11798066), (MGI:MGI:3529401|PMID:15668394) RGD PMID:11798066, PMID:15668394 MGI:MGI:2156962, MGI:MGI:3529401 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component ISO (PMID:23201090) RGD PMID:23201090 NCBI chr 3:101,010,923...101,018,235
Ensembl chr 3:101,010,899...101,018,433
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:MGI:2676654 (MGI:MGI:5608927|PMID:25224220) RGD PMID:25224220 MGI:MGI:5608927 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207
JBrowse link
G Mpp5 membrane palmitoylated protein 5 ISO (PMID:23201090) RGD PMID:23201090 NCBI chr 6:101,923,675...102,029,705
Ensembl chr 6:101,923,785...102,028,592
JBrowse link
G Notch2 notch receptor 2 ISO
IEA
MGI:MGI:1933205 (MGI:MGI:2158685|PMID:11861489)
GO_REF:0000107
RGD
Ensembl
PMID:11861489 GO_REF:0000107, MGI:MGI:2158685 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Srf serum response factor ISO MGI:MGI:2445832|MGI:MGI:3522206 (MGI:MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:MGI:4421610 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 ISO (MGI:MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:MGI:3719969 NCBI chr 5:150,533,895...150,609,423
Ensembl chr 5:150,546,430...150,609,352
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(MGI:MGI:3797299|PMID:18423449)
GO_REF:0000024
RGD
UniProt
PMID:18423449 GO_REF:0000024, MGI:MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:MGI:106613 (MGI:MGI:3624185|PMID:16571627) RGD PMID:16571627 MGI:MGI:3624185 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO MGI:MGI:2135272|MGI:MGI:2429760|MGI:MGI:94941 (MGI:MGI:3624185|PMID:16571627) RGD PMID:16571627 MGI:MGI:3624185 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:106613|MGI:MGI:1857642 (MGI:MGI:3624185|PMID:16571627), (MGI:MGI:3703464|PMID:17229766) RGD PMID:16571627, PMID:17229766 MGI:MGI:3624185, MGI:MGI:3703464 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Megf8 multiple EGF-like-domains 8 IEA
ISO
GO_REF:0000107
(PMID:23063620)
Ensembl
RGD
PMID:23063620 GO_REF:0000107 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045
JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 ISO UniProtKB:P23359 (MGI:MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:MGI:1332253 NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO UniProtKB:P49003 (MGI:MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:MGI:1332253 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:MGI:3056036 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:98958 (MGI:MGI:4413372|PMID:19795512)
PMID:21873635
RGD PMID:19795512, PMID:21873635 MGI:MGI:4413372, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3027664|PMID:14701881), (MGI:MGI:4837019|PMID:20890042), (MGI:MGI:5298073|PMID:21311046) RGD PMID:14701881, PMID:20890042, PMID:21311046 MGI:MGI:3027664, MGI:MGI:4837019, MGI:MGI:5298073 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO MGI:MGI:2155441 (MGI:MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:MGI:85697 NCBI chr 6:3,105,443...3,182,977
Ensembl chr 6:3,104,861...3,182,996
JBrowse link
G Tbx20 T-box transcription factor 20 ISO (MGI:MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:MGI:3579960 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:MGI:1298218 (MGI:MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 fermitin family member 1 ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Rreb1 ras responsive element binding protein 1 ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:27,539,137...27,718,878
Ensembl chr17:27,539,133...27,665,266
JBrowse link
proepicardium cell migration involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flrt3 fibronectin leucine rich transmembrane protein 3 ISO
IEA
ISS
(MGI:MGI:3796818|PMID:18448090)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18448090 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3796818 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654
JBrowse link
wound healing, spreading of cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3803424|PMID:18502760)
Ensembl
UniProt
RGD
PMID:18502760 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3803424 NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374
JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 ISO (PMID:26466680), (PMID:26578515) RGD PMID:26466680, PMID:26578515 NCBI chr19:37,652,383...37,665,333
Ensembl chr19:37,652,969...37,668,019
JBrowse link
G Ccn1 cellular communication network factor 1 ISO
IEA
(PMID:20675382)
GO_REF:0000107
RGD
Ensembl
PMID:20675382 GO_REF:0000107 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Cd151 CD151 molecule (Raph blood group) ISO (PMID:17716972) RGD PMID:17716972 NCBI chr 1:214,446,659...214,450,668
Ensembl chr 1:214,009,784...214,013,765
Ensembl chr 1:214,009,784...214,013,765
JBrowse link
G Cd44 CD44 molecule (Indian blood group) IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20962267)
Ensembl
UniProt
RGD
PMID:20962267 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO
ISS
(PMID:16291724)
GO_REF:0000024
RGD
UniProt
PMID:16291724 GO_REF:0000024 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3629583|PMID:12065315)
(PMID:12065315)
Ensembl
UniProt
RGD
PMID:12065315 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3629583 NCBI chr20:3,553,430...3,574,959
Ensembl chr20:3,552,929...3,575,780
JBrowse link
G Flna filamin A ISO (PMID:16291724) RGD PMID:16291724 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 NOT ISO (PMID:16636079) RGD PMID:16636079 NCBI chr15:57,170,566...57,277,811
Ensembl chr15:57,221,292...57,277,811
JBrowse link
G Mrtfa myocardin related transcription factor A ISO (PMID:29391067) RGD PMID:29391067 NCBI chr 7:122,233,196...122,403,661
Ensembl chr 7:122,234,012...122,403,667
JBrowse link
G Pard3 par-3 family cell polarity regulator ISO (MGI:MGI:4359132|PMID:19540120) RGD PMID:19540120 MGI:MGI:4359132 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651
JBrowse link
G Pdcd10 programmed cell death 10 ISO (PMID:20332113) RGD PMID:20332113 NCBI chr 2:173,966,701...174,012,730
Ensembl chr 2:173,967,080...174,012,676
JBrowse link
G Pdpn podoplanin ISO
ISS
(PMID:20962267)
GO_REF:0000024
RGD
UniProt
PMID:20962267 GO_REF:0000024 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Rhoa ras homolog family member A ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rhoc ras homolog family member C ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 2:207,271,692...207,278,010
Ensembl chr 2:207,271,853...207,279,314
JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 ISO (PMID:24632071) RGD PMID:24632071 NCBI chr 9:55,379,130...55,673,704
Ensembl chr 9:55,384,100...55,673,829
JBrowse link
G Tor1a torsin family 1, member A ISO
ISS
(MGI:MGI:3814961|PMID:18827015)
GO_REF:0000024
RGD
UniProt
PMID:18827015 GO_REF:0000024, MGI:MGI:3814961 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO
IEA
(PMID:14970227)
GO_REF:0000107
RGD
Ensembl
PMID:14970227 GO_REF:0000107 NCBI chr 6:43,400,525...43,448,280
Ensembl chr 6:43,400,528...43,448,280
JBrowse link
G Ajuba ajuba LIM protein ISO MGI:MGI:3578221 (MGI:MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:MGI:3577694 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 ISO
IBA
(MGI:MGI:5297730|PMID:21911940)
PMID:21873635
RGD PMID:21911940, PMID:21873635 MGI:MGI:5297730, RGD:13792537 NCBI chr14:8,383,211...8,600,526
Ensembl chr14:8,383,214...8,600,512
JBrowse link
G Col5a1 collagen type V alpha 1 chain IEA
ISO
GO_REF:0000107
(PMID:18305566)
Ensembl
RGD
PMID:18305566 GO_REF:0000107 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Hbegf heparin-binding EGF-like growth factor ISO (MGI:MGI:3580979|PMID:15923649) RGD PMID:15923649 MGI:MGI:3580979 NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
JBrowse link
G Itga5 integrin subunit alpha 5 ISO (PMID:14970227) RGD PMID:14970227 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO
IEA
(PMID:15802269)
GO_REF:0000107
RGD
Ensembl
PMID:15802269 GO_REF:0000107 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Msx2 msh homeobox 2 ISO
IEA
MGI:MGI:1926381 (MGI:MGI:4868690|PMID:19769717)
GO_REF:0000107
RGD
Ensembl
PMID:19769717 GO_REF:0000107, MGI:MGI:4868690 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Plet1 placenta expressed transcript 1 ISO
IBA
ISS
(MGI:MGI:4453442|PMID:20130590)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20130590, PMID:21873635 GO_REF:0000024, MGI:MGI:4453442, RGD:13792537 NCBI chr 8:54,925,624...54,937,068
Ensembl chr 8:54,925,607...54,937,177
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:191,829,547...191,883,991
Ensembl chr 1:191,829,555...191,884,298
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:191,704,397...191,738,271
Ensembl chr 1:191,704,311...191,738,268
JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:15802269) RGD PMID:15802269 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure morphogenesis 2877
        tissue morphogenesis 698
          morphogenesis of an epithelium 586
            morphogenesis of an epithelial sheet 65
              closure of optic fissure 2
              epiboly + 39
              neural plate elongation + 3
              neural plate thickening 0
              pericardium morphogenesis + 9
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        anatomical structure morphogenesis 2877
          tissue morphogenesis 698
            morphogenesis of an epithelium 586
              morphogenesis of an epithelial sheet 65
                closure of optic fissure 2
                epiboly + 39
                neural plate elongation + 3
                neural plate thickening 0
                pericardium morphogenesis + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.