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ONTOLOGY REPORT - ANNOTATIONS


Term:optic cup morphogenesis involved in camera-type eye development
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Accession:GO:0002072 term browser browse the term
Definition:The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus.
Synonyms:exact_synonym: optic cup morphogenesis involved in camera-style eye development


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optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 JBrowse link 1 238,222,689 238,264,381 RGD:1624291
RGD:1600115
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 JBrowse link 1 127,302,920 127,337,828 RGD:1624291
RGD:1600115
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:1624291
RGD:1600115
closure of optic fissure term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Phactr4 phosphatase and actin regulator 4 JBrowse link 5 150,533,895 150,609,423 RGD:1624291
G Sox11 SRY-box transcription factor 11 JBrowse link 6 46,629,967 46,631,988 RGD:1624291
RGD:1600115
optic cup formation involved in camera-type eye development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:1624291
RGD:1600115
optic cup structural organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tfap2a transcription factor AP-2 alpha JBrowse link 17 24,653,342 24,670,457 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18166
    developmental process 6539
      anatomical structure formation involved in morphogenesis 1170
        embryonic camera-type eye formation 11
          optic cup morphogenesis involved in camera-type eye development 7
            closure of optic fissure 2
            optic cup formation involved in camera-type eye development 1
            optic cup structural organization 1
Path 2
Term Annotations click to browse term
  biological_process 18166
    developmental process 6539
      anatomical structure development 6020
        multicellular organism development 5501
          system development 5050
            animal organ development 3862
              sensory organ development 660
                eye development 431
                  camera-type eye development 386
                    embryonic camera-type eye development 40
                      embryonic camera-type eye morphogenesis 28
                        embryonic camera-type eye formation 11
                          optic cup morphogenesis involved in camera-type eye development 7
                            closure of optic fissure 2
                            optic cup formation involved in camera-type eye development 1
                            optic cup structural organization 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.