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ONTOLOGY REPORT - ANNOTATIONS


Term:osteoblast development
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Accession:GO:0002076 term browser browse the term
Definition:The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.


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osteoblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Ache acetylcholinesterase ISO
IEA
(PMID:15454088)
GO_REF:0000107
RGD
Ensembl
PMID:15454088 GO_REF:0000107 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:20020468 RGD:2316141 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEP RGD PMID:1377818 RGD:69946 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Clec5a C-type lectin domain containing 5A ISO (MGI:MGI:3839503|PMID:19251634) RGD PMID:19251634 MGI:MGI:3839503 NCBI chr 4:68,810,330...68,819,921
Ensembl chr 4:68,808,359...68,819,928
JBrowse link
G Esr1 estrogen receptor 1 IEP RGD PMID:9528993 RGD:2313676 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:MGI:3653954|PMID:16880529) RGD PMID:16880529 MGI:MGI:3653954 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:MGI:3584056 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO (MGI:MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:MGI:3584056 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO MGI:MGI:99829 (MGI:MGI:3836510|PMID:18986983) RGD PMID:18986983 MGI:MGI:3836510 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:MGI:2679336 (MGI:MGI:3692344|PMID:16751105) RGD PMID:16751105 MGI:MGI:3692344 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO MGI:MGI:1316736 (MGI:MGI:3573815|PMID:15563473) RGD PMID:15563473 MGI:MGI:3573815 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Limd1 LIM domains containing 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:3698661|PMID:17092936), (MGI:MGI:3807091|PMID:18657804)
UniProt
RGD
PMID:17092936, PMID:18657804 GO_REF:0000024, MGI:MGI:3698661, MGI:MGI:3807091 NCBI chr 8:132,553,218...132,598,826
Ensembl chr 8:132,553,218...132,598,812
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO
IBA
MGI:MGI:3612485 (MGI:MGI:3694400|PMID:16790443), (MGI:MGI:4835143|PMID:17700537)
PMID:21873635
RGD PMID:16790443, PMID:17700537, PMID:21873635 MGI:MGI:3694400, MGI:MGI:4835143, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Men1 menin 1 ISO MGI:MGI:1316736 (PMID:15563473)
MGI:MGI:1201674|MGI:MGI:96648 (MGI:MGI:3056877|PMID:15150273), (MGI:MGI:3573815|PMID:15563473)
RGD PMID:15150273, PMID:15563473 MGI:MGI:3056877, MGI:MGI:3573815 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Msx2 msh homeobox 2 IEP
IEA
ISO
GO_REF:0000107
MGI:MGI:1926381 (MGI:MGI:1355063|PMID:10742104)
Ensembl
RGD
PMID:10742104, PMID:11336915 GO_REF:0000107, MGI:MGI:1355063, RGD:5132630 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO MGI:MGI:2154519 (MGI:MGI:3624906|PMID:9832460) RGD PMID:9832460 MGI:MGI:3624906 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Pthlh parathyroid hormone-like hormone TAS
IBA
ISO
PMID:21873635
MGI:MGI:2154515 (MGI:MGI:3624906|PMID:9832460)
RGD PMID:9832460, PMID:12706025, PMID:21873635 MGI:MGI:3624906, RGD:1601570, RGD:13792537 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Runx2 RUNX family transcription factor 2 ISO
IEA
MGI:MGI:1341800 (MGI:MGI:3836510|PMID:18986983)
GO_REF:0000107
RGD
Ensembl
PMID:18986983 GO_REF:0000107, MGI:MGI:3836510 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Satb2 SATB homeobox 2 ISO MGI:MGI:3692768|MGI:MGI:96174 (MGI:MGI:3692344|PMID:16751105) RGD PMID:16751105 MGI:MGI:3692344 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
(MGI:MGI:3653954|PMID:16880529)
GO_REF:0000107
RGD
Ensembl
PMID:16880529 GO_REF:0000107, MGI:MGI:3653954 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:MGI:3056877 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tnn tenascin N ISO (MGI:MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:MGI:3710297 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular developmental process 4443
        cell development 2526
          osteoblast development 25
Path 2
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular developmental process 4443
        cell differentiation 4346
          cell development 2526
            osteoblast development 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.