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ONTOLOGY REPORT - ANNOTATIONS


Term:mature B cell differentiation involved in immune response
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Accession:GO:0002313 term browser browse the term
Definition:The process in which a naive B cell acquires the specialized features of a mature or memory B cell during an immune response.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:related_synonym: mature B cell development involved in immune response;   mature B-cell differentiation during immune response;   mature B-lymphocyte differentiation during immune response


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mature B cell differentiation involved in immune response term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr183 G protein-coupled receptor 183 ISO (MGI:MGI:4352759|PMID:19597478) RGD PMID:19597478 MGI:MGI:4352759 NCBI chr15:108,364,701...108,376,221
Ensembl chr15:108,364,701...108,376,221
JBrowse link
G LOC688282 hypothetical protein LOC688282 ISO (MGI:MGI:6103709|PMID:28978694) RGD PMID:28978694 MGI:MGI:6103709 NCBI chr10:106,800,040...106,810,153
Ensembl chr10:106,800,142...106,809,239
JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg2 phospholipase C, gamma 2 ISO
IEA
MGI:MGI:2386100 (MGI:MGI:2679743|PMID:12928432)
GO_REF:0000107
RGD
Ensembl
PMID:12928432 GO_REF:0000107, MGI:MGI:2679743 NCBI chr19:50,039,410...50,173,543
Ensembl chr19:50,045,020...50,173,220
JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO MGI:MGI:1857117|MGI:MGI:2683027 (MGI:MGI:3619310|PMID:14607964) RGD PMID:14607964 MGI:MGI:3619310 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Cdh17 cadherin 17 ISO (MGI:MGI:3531365|PMID:15688343) RGD PMID:15688343 MGI:MGI:3531365 NCBI chr 5:25,354,187...25,443,675
Ensembl chr 5:25,391,115...25,443,718
JBrowse link
G Il21 interleukin 21 ISS
ISO
GO_REF:0000024
(MGI:MGI:5450752|PMID:23045607)
UniProt
RGD
PMID:23045607 GO_REF:0000024, MGI:MGI:5450752 NCBI chr 2:123,965,021...123,972,356
Ensembl chr 2:123,965,021...123,972,356
JBrowse link
G Il6 interleukin 6 ISS
ISO
GO_REF:0000024
(MGI:MGI:5450752|PMID:23045607)
UniProt
RGD
PMID:23045607 GO_REF:0000024, MGI:MGI:5450752 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO MGI:MGI:4235940 (MGI:MGI:5547463|PMID:23997217) RGD PMID:23997217 MGI:MGI:5547463 NCBI chr 4:161,730,643...161,744,281
Ensembl chr 4:161,730,641...161,743,896
JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 ISO (MGI:MGI:5450752|PMID:23045607) RGD PMID:23045607 MGI:MGI:5450752 NCBI chr 8:55,603,968...55,631,448
Ensembl chr 8:55,603,968...55,631,446
JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3, transcription coactivator ISO MGI:MGI:1861796 (MGI:MGI:85481|PMID:9009202) RGD PMID:9009202 MGI:MGI:85481 NCBI chr 1:80,730,758...80,745,273
Ensembl chr 1:80,730,499...80,744,831
JBrowse link
G Cdh17 cadherin 17 ISO (MGI:MGI:3531365|PMID:15688343) RGD PMID:15688343 MGI:MGI:3531365 NCBI chr 5:25,354,187...25,443,675
Ensembl chr 5:25,391,115...25,443,718
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:3044313|PMID:15146182), (MGI:MGI:3838059|PMID:19217325)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15146182, PMID:19217325 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3044313, MGI:MGI:3838059 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Dock10 dedicator of cytokinesis 10 ISO (MGI:MGI:5818419|PMID:25729399) RGD PMID:25729399 MGI:MGI:5818419 NCBI chr 9:86,424,638...86,571,854
NCBI chr 9:86,312,470...86,423,054
Ensembl chr 9:86,312,501...86,571,870
JBrowse link
G Dock11 dedicator of cytokinesis 11 ISO (MGI:MGI:5818419|PMID:25729399) RGD PMID:25729399 MGI:MGI:5818419 NCBI chr  X:122,507,169...122,690,463
Ensembl chr  X:122,507,374...122,690,465
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO
ISS
(MGI:MGI:3838059|PMID:19217325)
GO_REF:0000024
RGD
UniProt
PMID:19217325 GO_REF:0000024, MGI:MGI:3838059 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:3838059|PMID:19217325) RGD PMID:19217325 MGI:MGI:3838059 NCBI chr 7:119,978,981...119,996,824
Ensembl chr 7:119,978,983...119,996,824
JBrowse link
G Notch2 notch receptor 2 ISO
IEA
ISS
(MGI:MGI:3838059|PMID:19217325)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19217325 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3838059 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO
ISS
(MGI:MGI:1860716|PMID:10881171)
GO_REF:0000024
RGD
UniProt
PMID:10881171 GO_REF:0000024, MGI:MGI:1860716 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
memory B cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (MGI:MGI:2387354|PMID:10755614) RGD PMID:10755614 MGI:MGI:2387354 NCBI chr 7:107,895,045...107,963,158
Ensembl chr 7:107,895,045...107,963,142
JBrowse link
plasma cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itm2a integral membrane protein 2A ISO MGI:MGI:5645968 (MGI:MGI:5613782|PMID:24831988) RGD PMID:24831988 MGI:MGI:5613782 NCBI chr  X:78,490,872...78,496,814
Ensembl chr  X:78,490,866...78,496,847
JBrowse link
G Lgals1 galectin 1 ISO (MGI:MGI:5301217|PMID:21753146) RGD PMID:21753146 MGI:MGI:5301217 NCBI chr 7:120,153,184...120,156,290
Ensembl chr 7:120,153,184...120,156,289
JBrowse link
G Lgals8 galectin 8 ISO (MGI:MGI:5301217|PMID:21753146) RGD PMID:21753146 MGI:MGI:5301217 NCBI chr17:66,487,451...66,515,316
Ensembl chr17:66,487,457...66,511,870
JBrowse link
G Nkx2-3 NK2 homeobox 3 ISO MGI:MGI:2448069 (MGI:MGI:1888604|PMID:10926756) RGD PMID:10926756 MGI:MGI:1888604 NCBI chr 1:263,361,238...263,371,043
Ensembl chr 1:263,367,266...263,370,219
JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO UniProtKB:P60568 (PMID:22962438) RGD PMID:22962438 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il2 interleukin 2 ISO UniProtKB:P22301 (PMID:22962438) RGD PMID:22962438 NCBI chr 2:123,847,150...123,851,854
Ensembl chr 2:123,847,150...123,851,854
JBrowse link
G Xbp1 X-box binding protein 1 ISO
ISS
(PMID:11460154)
GO_REF:0000024
RGD
UniProt
PMID:11460154 GO_REF:0000024 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    immune system process 2844
      leukocyte activation 1058
        leukocyte activation involved in immune response 294
          lymphocyte activation involved in immune response 200
            B cell activation involved in immune response 88
              mature B cell differentiation involved in immune response 25
                follicular B cell differentiation 1
                germinal center B cell differentiation 6
                marginal zone B cell differentiation 9
                memory B cell differentiation 1
                plasma cell differentiation + 7
Path 2
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            animal organ development 4035
              hematopoietic or lymphoid organ development 1008
                hemopoiesis 956
                  leukocyte differentiation 597
                    lymphocyte differentiation 409
                      B cell differentiation 148
                        mature B cell differentiation 32
                          mature B cell differentiation involved in immune response 25
                            follicular B cell differentiation 1
                            germinal center B cell differentiation 6
                            marginal zone B cell differentiation 9
                            memory B cell differentiation 1
                            plasma cell differentiation + 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.