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ONTOLOGY REPORT - ANNOTATIONS


Term:endothelium development
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Accession:GO:0003158 term browser browse the term
Definition:The process whose specific outcome is the progression of an endothelium over time, from its formation to the mature structure. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.


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endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule ISO (PMID:17261663) RGD PMID:17261663 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
G Gja1 gap junction protein, alpha 1 IEP RGD PMID:10990491 RGD:7207853 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gja4 gap junction protein, alpha 4 IEP RGD PMID:10990491 RGD:7207853 NCBI chr 5:145,374,688...145,377,221
Ensembl chr 5:145,374,690...145,377,221
JBrowse link
G Gja5 gap junction protein, alpha 5 IEP RGD PMID:10990491 RGD:7207853 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Kdr kinase insert domain receptor ISO
ISS
(MGI:MGI:74276|PMID:7596435)
GO_REF:0000024
RGD
UniProt
PMID:7596435 GO_REF:0000024, MGI:MGI:74276 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Slc40a1 solute carrier family 40 member 1 ISO MGI:MGI:1889622 (MGI:MGI:3578034|PMID:15342464) RGD PMID:15342464 MGI:MGI:3578034 NCBI chr 9:52,819,451...52,830,461
Ensembl chr 9:52,894,365...52,912,293
JBrowse link
arterial endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO UniProtKB:Q9QUS4 (MGI:MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:MGI:3040159 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO UniProtKB:Q9WV93 (MGI:MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:MGI:3040159 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:MGI:3040159 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Tmem100 transmembrane protein 100 ISO MGI:MGI:5432904|MGI:MGI:5432905 (MGI:MGI:5432418|PMID:22783020) RGD PMID:22783020 MGI:MGI:5432418 NCBI chr10:77,537,340...77,543,710
Ensembl chr10:77,537,340...77,543,192
JBrowse link
arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
blood vessel endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccm2 CCM2 scaffold protein ISO MGI:MGI:3512761 (MGI:MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:MGI:3837878 NCBI chr14:86,812,728...86,859,408
Ensembl chr14:86,813,082...86,859,406
JBrowse link
blood vessel endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO UniProtKB:P52800 (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
blood vessel lumenization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
central nervous system vasculogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148569 (MGI:MGI:3821408|PMID:19023080)
GO_REF:0000107
RGD
Ensembl
PMID:19023080 GO_REF:0000107, MGI:MGI:3821408 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Eng endoglin ISO (PMID:7894484) RGD PMID:7894484 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Rtn4 reticulon 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:5492189|PMID:23625008)
UniProt
RGD
PMID:23625008 GO_REF:0000024, MGI:MGI:5492189 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
G Wnt7a Wnt family member 7A ISO MGI:MGI:98962 (MGI:MGI:3821408|PMID:19023080) RGD PMID:19023080 MGI:MGI:3821408 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Wnt7b Wnt family member 7B ISO MGI:MGI:98961 (MGI:MGI:3821408|PMID:19023080) RGD PMID:19023080 MGI:MGI:3821408 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
endocardial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO (MGI:MGI:4837019|PMID:20890042) RGD PMID:20890042 MGI:MGI:4837019 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nrg1 neuregulin 1 ISO
IEA
(PMID:17336907)
GO_REF:0000107
RGD
Ensembl
PMID:17336907 GO_REF:0000107 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Smad4 SMAD family member 4 ISO
IEA
(MGI:MGI:4946551|PMID:21330551)
GO_REF:0000107
RGD
Ensembl
PMID:21330551 GO_REF:0000107, MGI:MGI:4946551 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO MGI:MGI:103559 (MGI:MGI:3716256|PMID:17610846) RGD PMID:17610846 MGI:MGI:3716256 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Sox18 SRY-box transcription factor 18 ISO MGI:MGI:107543 (MGI:MGI:3716256|PMID:17610846) RGD PMID:17610846 MGI:MGI:3716256 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127
JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
endothelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccm2 CCM2 scaffold protein ISO MGI:MGI:1924696|MGI:MGI:3512761 (MGI:MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:MGI:3837878 NCBI chr14:86,812,728...86,859,408
Ensembl chr14:86,813,082...86,859,406
JBrowse link
G Gpx1 glutathione peroxidase 1 ISO
IEA
MGI:MGI:2158814 (MGI:MGI:3698597|PMID:16373599)
GO_REF:0000107
RGD
Ensembl
PMID:16373599 GO_REF:0000107, MGI:MGI:3698597 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 ISO MGI:MGI:2384924 (MGI:MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:MGI:3837878 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Ubiad1 UbiA prenyltransferase domain containing 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:165,247,630...165,259,228
Ensembl chr 5:165,247,133...165,259,224
JBrowse link
G Vezf1 vascular endothelial zinc finger 1 ISO MGI:MGI:3583268 (MGI:MGI:3581991|PMID:15882861) RGD PMID:15882861 MGI:MGI:3581991 NCBI chr10:75,365,763...75,382,014
Ensembl chr10:75,365,822...75,381,555
JBrowse link
endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Fstl1 follistatin-like 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:4457221|PMID:20054002)
UniProt
RGD
PMID:20054002 GO_REF:0000024, MGI:MGI:4457221 NCBI chr11:65,791,196...65,845,721
Ensembl chr11:65,782,567...65,845,418
JBrowse link
G Hoxb5 homeo box B5 ISO (MGI:MGI:2670246|PMID:12897140) RGD PMID:12897140 MGI:MGI:2670246 NCBI chr10:84,152,152...84,154,360
Ensembl chr10:84,152,152...84,154,360
JBrowse link
G Kdm6b lysine demethylase 6B ISO (MGI:MGI:5574281|PMID:23856522) RGD PMID:23856522 MGI:MGI:5574281 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Kdr kinase insert domain receptor IBA
ISO
PMID:21873635
(MGI:MGI:2670246|PMID:12897140), (MGI:MGI:5543371|PMID:18772315)
RGD PMID:12897140, PMID:18772315, PMID:21873635 MGI:MGI:2670246, MGI:MGI:5543371, RGD:13792537 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (PMID:18297060) RGD PMID:18297060 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Prox1 prospero homeobox 1 ISO MGI:MGI:2386336 (MGI:MGI:2177970|PMID:11927535) RGD PMID:11927535 MGI:MGI:2177970 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:20830586 RGD:9686141 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 IEP RGD PMID:7959012 RGD:61573 NCBI chr 2:218,654,406...218,658,761
Ensembl chr 2:218,654,554...218,658,761
JBrowse link
endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa13 homeo box A13 ISO MGI:MGI:2152356 (MGI:MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 ISO MGI:MGI:5500046 (MGI:MGI:5486234|PMID:23372835) RGD PMID:23372835 MGI:MGI:5486234 NCBI chr 2:27,107,263...27,236,336
Ensembl chr 2:27,107,318...27,236,672
JBrowse link
G Clic4 chloride intracellular channel 4 ISO
IEA
MGI:MGI:3838012 (MGI:MGI:3837628|PMID:19197003)
GO_REF:0000107
RGD
Ensembl
PMID:19197003 GO_REF:0000107, MGI:MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Cnmd chondromodulin ISO
IBA
(MGI:MGI:2656472|PMID:12714610)
PMID:21873635
RGD PMID:12714610, PMID:21873635 MGI:MGI:2656472, RGD:13792537 NCBI chr15:61,923,291...61,947,840
Ensembl chr15:61,923,299...61,947,764
JBrowse link
G Col15a1 collagen type XV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,840,360...62,950,240 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain ISO
IBA
(MGI:MGI:3046127|PMID:15188432)
PMID:21873635
RGD PMID:15188432, PMID:21873635 MGI:MGI:3046127, RGD:13792537 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,014,896...113,251,165
Ensembl chr 7:113,015,747...113,228,439
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,200,686...251,436,254
Ensembl chr 2:251,200,686...251,434,932
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 ISO MGI:MGI:3838392 (MGI:MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:MGI:3837878 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Hoxa13 homeo box A13 ISO MGI:MGI:2152356 (MGI:MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO MGI:MGI:2679939 (MGI:MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:MGI:3759000 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:MGI:2157527 (MGI:MGI:4940123|PMID:21285373) RGD PMID:21285373 MGI:MGI:4940123 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G LOC108348074 collagen alpha-1(XV) chain-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:64,475,618...64,543,510 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISO
GO_REF:0000107
(PMID:14500721)
Ensembl
RGD
PMID:14500721 GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO MGI:MGI:2677448 (MGI:MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:MGI:3723364 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO MGI:MGI:3620600|MGI:MGI:3620601 (MGI:MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:MGI:3618677 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
G Stc1 stanniocalcin 1 ISO (PMID:14500721) RGD PMID:14500721 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
G Tnmd tenomodulin ISO
IBA
(MGI:MGI:2656472|PMID:12714610)
PMID:21873635
RGD PMID:12714610, PMID:21873635 MGI:MGI:2656472, RGD:13792537 NCBI chr  X:104,684,676...104,700,173
Ensembl chr  X:104,684,676...104,700,173
JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5466218|PMID:22282195)
Ensembl
UniProt
RGD
PMID:22282195 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5466218 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
endothelial tube lumen extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A ISO UniProtKB:Q9Y3M8 (PMID:20208559) RGD PMID:20208559 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Stard13 StAR-related lipid transfer domain containing 13 ISO UniProtKB:P61586 (PMID:20208559) RGD PMID:20208559 NCBI chr12:1,023,494...1,418,919
Ensembl chr12:1,023,531...1,195,591
JBrowse link
endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:19592636) RGD PMID:19592636 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Bsg basigin (Ok blood group) ISO
ISS
(PMID:19837976)
GO_REF:0000024
RGD
UniProt
PMID:19837976 GO_REF:0000024 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Ccm2 CCM2 scaffold protein ISO (PMID:19151727) RGD PMID:19151727 NCBI chr14:86,812,728...86,859,408
Ensembl chr14:86,813,082...86,859,406
JBrowse link
G Csnk2b casein kinase 2 beta ISO (PMID:19592636) RGD PMID:19592636 NCBI chr20:5,108,692...5,113,675
Ensembl chr20:5,106,890...5,113,112
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
ISS
(PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20123964 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Rhob ras homolog family member B ISO (PMID:21347332) RGD PMID:21347332 NCBI chr 6:33,689,127...33,691,301
Ensembl chr 6:33,689,127...33,691,301
JBrowse link
establishment of blood-nerve barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO MGI:MGI:2136636 (MGI:MGI:2385816|PMID:9734405) RGD PMID:9734405 MGI:MGI:2385816 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22733753 RGD:11341802 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Dmd dystrophin ISO MGI:MGI:1856328 (MGI:MGI:3612931|PMID:12673830) RGD PMID:12673830 MGI:MGI:3612931 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 ISO
IEA
MGI:MGI:4437572 (MGI:MGI:4437139|PMID:20181608)
GO_REF:0000107
RGD
Ensembl
PMID:20181608 GO_REF:0000107, MGI:MGI:4437139 NCBI chr 2:187,395,104...187,402,076
Ensembl chr 2:187,396,349...187,401,786
JBrowse link
G Ren renin NOT ISO MGI:MGI:2136642 (MGI:MGI:1351364|PMID:10617578) RGD PMID:10617578 MGI:MGI:1351364 NCBI chr13:50,502,724...50,513,953
Ensembl chr13:50,502,724...50,514,151
JBrowse link
establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn5 claudin 5 ISO (PMID:24280217) RGD PMID:24280217 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Ezr ezrin ISO UniProtKB:P26038|UniProtKB:P35241 (PMID:23264465) RGD PMID:23264465 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:20826780) RGD PMID:20826780 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO UniProtKB:Q96S97 (PMID:23264465) RGD PMID:23264465 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Marveld2 MARVEL domain containing 2 ISO (PMID:23073616) RGD PMID:23073616 NCBI chr 2:30,612,746...30,634,308
Ensembl chr 2:30,612,106...30,634,243
JBrowse link
G Msn moesin IEA
ISO
GO_REF:0000107
UniProtKB:P15311|UniProtKB:P35241 (PMID:23264465)
Ensembl
RGD
PMID:23264465 GO_REF:0000107 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Myadm myeloid-associated differentiation marker ISO (PMID:23264465) RGD PMID:23264465 NCBI chr 1:64,438,465...64,448,332
Ensembl chr 1:64,438,472...64,446,818
JBrowse link
G Pde2a phosphodiesterase 2A IDA PMID:20139324 UniProt PMID:20139324 RGD:8553884 NCBI chr 1:166,534,643...166,626,158
Ensembl chr 1:166,534,643...166,626,158
JBrowse link
G Pde4d phosphodiesterase 4D IDA PMID:20139324 UniProt PMID:20139324 RGD:8553884 NCBI chr 2:40,219,999...41,468,551
Ensembl chr 2:40,554,146...41,464,264
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO (PMID:7589563) RGD PMID:7589563 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Ppp1r16b protein phosphatase 1, regulatory subunit 16B ISO
IBA
(MGI:MGI:5604907|PMID:21907835)
PMID:21873635
(PMID:18586956)
RGD PMID:18586956, PMID:21907835, PMID:21873635 MGI:MGI:5604907, RGD:13792537 NCBI chr 3:155,160,474...155,267,002
Ensembl chr 3:155,160,481...155,262,941
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 7:60,850,406...60,878,226
Ensembl chr 7:60,853,930...60,860,990
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO (PMID:21840392) RGD PMID:21840392 NCBI chr 3:8,189,594...8,307,077
Ensembl chr 3:8,192,575...8,304,976
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 ISO
IEA
ISS
(PMID:21840392)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21840392 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Rdx radixin ISO UniProtKB:P15311|UniProtKB:P26038 (PMID:23264465) RGD PMID:23264465 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Robo4 roundabout guidance receptor 4 ISO (PMID:30455415) RGD PMID:30455415 NCBI chr 8:39,082,693...39,093,344
Ensembl chr 8:39,083,327...39,093,277
JBrowse link
G Sox18 SRY-box transcription factor 18 ISO (PMID:18065521) RGD PMID:18065521 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127
JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IMP RGD PMID:16850390 RGD:1598561 NCBI chr 4:22,225,123...22,307,577
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Cldn3 claudin 3 ISO (MGI:MGI:6368952|PMID:12734665) RGD PMID:12734665 MGI:MGI:6368952 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Foxp3 forkhead box P3 IEP RGD PMID:31027862 RGD:38549575 NCBI chr  X:15,753,175...15,768,648
Ensembl chr  X:15,753,175...15,768,522
JBrowse link
establishment of endothelial intestinal barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 1:53,713,873...53,861,918
Ensembl chr 1:53,715,693...53,802,658
JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G F11r F11 receptor ISO
IBA
UniProtKB:Q9Y3L5 (PMID:23885123)
PMID:21873635
RGD PMID:23885123, PMID:21873635 RGD:13792537 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Fasn fatty acid synthase ISO MGI:MGI:3765070 (MGI:MGI:5630041|PMID:25565205) RGD PMID:25565205 MGI:MGI:5630041 NCBI chr10:109,987,735...110,005,901
Ensembl chr10:109,987,735...110,005,901
JBrowse link
G Icam1 intercellular adhesion molecule 1 IMP RGD PMID:10201790 RGD:11520782 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Mir874 microRNA 874 ISO (MGI:MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:MGI:5551666 NCBI chr17:7,025,014...7,025,089
Ensembl chr17:7,025,014...7,025,089
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO MGI:MGI:2385681 (MGI:MGI:5306517|PMID:22155109) RGD PMID:22155109 MGI:MGI:5306517 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S ISO
IEA
MGI:MGI:2158734 (MGI:MGI:5550154|PMID:24385580)
GO_REF:0000107
RGD
Ensembl
PMID:24385580 GO_REF:0000107, MGI:MGI:5550154 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Rab1a RAB1A, member RAS oncogene family NOT ISO (PMID:23885123) RGD PMID:23885123 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Rab1b RAB1B, member RAS oncogene family NOT ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 1:220,483,529...220,491,469
Ensembl chr 1:220,480,834...220,491,469
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family NOT ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 2:151,685,251...151,685,802
Ensembl chr 2:151,685,251...151,685,802
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family ISO UniProtKB:Q9Y624 (PMID:23885123) RGD PMID:23885123 NCBI chr  X:138,224,039...138,237,157
Ensembl chr  X:138,224,040...138,237,157
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 IEA
ISO
GO_REF:0000107
(PMID:23885123)
Ensembl
RGD
PMID:23885123 GO_REF:0000107 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Rapgef6 Rap guanine nucleotide exchange factor 6 NOT ISO (PMID:23885123) RGD PMID:23885123 NCBI chr10:39,875,322...40,039,929
Ensembl chr10:39,875,371...40,039,929
JBrowse link
G Tjp1 tight junction protein 1 ISO
IBA
(PMID:23885123)
PMID:21873635
RGD PMID:23885123, PMID:21873635 RGD:13792537 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
G Tjp2 tight junction protein 2 ISO
IBA
(PMID:23885123)
PMID:21873635
RGD PMID:23885123, PMID:21873635 RGD:13792537 NCBI chr 1:241,945,816...242,084,044
Ensembl chr 1:241,945,841...242,083,484
JBrowse link
G Tjp3 tight junction protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,295,892...11,314,535
Ensembl chr 7:11,295,892...11,315,615
JBrowse link
glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule ISO (PMID:17464107) RGD PMID:17464107 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:MGI:1857740 (MGI:MGI:3619287|PMID:16498405) RGD PMID:16498405 MGI:MGI:3619287 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO (PMID:17464107) RGD PMID:17464107 NCBI chr10:94,850,971...94,913,202 JBrowse link
lymphatic endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B ISO
IEA
(MGI:MGI:4436974|PMID:19903896)
GO_REF:0000107
RGD
Ensembl
PMID:19903896 GO_REF:0000107, MGI:MGI:4436974 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO (PMID:19903896)
(MGI:MGI:4436974|PMID:19903896)
RGD PMID:19903896 MGI:MGI:4436974 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:MGI:4436974 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:12198161)
MGI:MGI:2182767|MGI:MGI:3609548 (MGI:MGI:3820329|PMID:19056883)
RGD PMID:12198161, PMID:19056883 MGI:MGI:3820329 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Sox18 SRY-box transcription factor 18 ISO MGI:MGI:2178809 (MGI:MGI:3828192|PMID:18931657) RGD PMID:18931657 MGI:MGI:3828192 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127
JBrowse link
lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdpn podoplanin ISO
ISS
(MGI:MGI:4453945|PMID:20110424)
GO_REF:0000024
RGD
UniProt
PMID:20110424 GO_REF:0000024, MGI:MGI:4453945 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B ISO (PMID:9693135) RGD PMID:9693135 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
negative regulation of blood vessel endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj2 forkhead box J2 ISO (PMID:24792364) RGD PMID:24792364 NCBI chr 4:155,653,446...155,679,815
Ensembl chr 4:155,653,718...155,679,793
JBrowse link
negative regulation of endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (MGI:MGI:4830635|PMID:20406889) RGD PMID:20406889 MGI:MGI:4830635 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein IMP RGD PMID:20830586 RGD:9686141 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5661129|PMID:25535084)
Ensembl
RGD
PMID:25535084 GO_REF:0000107, MGI:MGI:5661129 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Notch4 notch receptor 4 ISO (MGI:MGI:1934537|PMID:11344305) RGD PMID:11344305 MGI:MGI:1934537 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 IMP RGD PMID:17450384 RGD:2302022 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:MGI:2136645|MGI:MGI:3608931 (MGI:MGI:5618205|PMID:25186293) RGD PMID:25186293 MGI:MGI:5618205 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
G Xdh xanthine dehydrogenase IEA
ISO
GO_REF:0000107
(PMID:18386220)
Ensembl
RGD
PMID:18386220 GO_REF:0000107 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO
IEA
(PMID:23765923)
GO_REF:0000107
RGD
Ensembl
PMID:23765923 GO_REF:0000107 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
negative regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G S1pr3 sphingosine-1-phosphate receptor 3 ISO (PMID:24851274) RGD PMID:24851274 NCBI chr17:13,799,383...13,812,877
Ensembl chr17:13,799,383...13,812,704
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:20048167) RGD PMID:20048167 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
Notch signaling pathway involved in arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3847069|PMID:19144989)
Ensembl
UniProt
RGD
PMID:19144989 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3847069 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
positive regulation of endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (MGI:MGI:4830635|PMID:20406889) RGD PMID:20406889 MGI:MGI:4830635 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 ISO (PMID:24463812) RGD PMID:24463812 NCBI chr 4:100,067,341...100,099,517
Ensembl chr 4:100,067,341...100,099,517
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(MGI:MGI:4830635|PMID:20406889)
GO_REF:0000107
RGD
Ensembl
PMID:20406889 GO_REF:0000107, MGI:MGI:4830635 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (MGI:MGI:4830635|PMID:20406889) RGD PMID:20406889 MGI:MGI:4830635 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Btg1 BTG anti-proliferation factor 1 ISO
ISS
(PMID:15033446)
GO_REF:0000024
RGD
UniProt
PMID:15033446 GO_REF:0000024 NCBI chr 7:37,812,831...37,815,088
Ensembl chr 7:37,812,831...37,815,088
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148567 (MGI:MGI:3773938|PMID:18231602)
GO_REF:0000107
RGD
Ensembl
PMID:18231602 GO_REF:0000107, MGI:MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Etv2 ETS variant transcription factor 2 ISO (MGI:MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:MGI:4415813 NCBI chr 1:89,091,239...89,094,570
Ensembl chr 1:89,091,239...89,094,530
JBrowse link
G Gdf2 growth differentiation factor 2 ISO (MGI:MGI:4830635|PMID:20406889) RGD PMID:20406889 MGI:MGI:4830635 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Notch1 notch receptor 1 IMP RGD PMID:19109527 RGD:2325303 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Tmem100 transmembrane protein 100 ISO (MGI:MGI:5432418|PMID:22783020) RGD PMID:22783020 MGI:MGI:5432418 NCBI chr10:77,537,340...77,543,710
Ensembl chr10:77,537,340...77,543,192
JBrowse link
G Vezf1 vascular endothelial zinc finger 1 ISO (PMID:27538588) RGD PMID:27538588 NCBI chr10:75,365,763...75,382,014
Ensembl chr10:75,365,822...75,381,555
JBrowse link
positive regulation of endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type IMP RGD PMID:10733500 RGD:2313864 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G Itgax integrin subunit alpha X ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 1:199,555,560...199,576,948
Ensembl chr 1:199,555,722...199,576,932
JBrowse link
positive regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:MGI:5796260|PMID:25978380)
(PMID:25978380)
Ensembl
RGD
PMID:25978380, PMID:21873635 GO_REF:0000107, MGI:MGI:5796260, RGD:13792537 NCBI chr14:81,367,466...81,426,610
Ensembl chr14:81,367,468...81,426,496
JBrowse link
G Akap11 A-kinase anchoring protein 11 IMP RGD PMID:25188285 RGD:14348953 NCBI chr15:60,722,138...60,766,673
Ensembl chr15:60,722,160...60,766,579
JBrowse link
G Cdh5 cadherin 5 ISO (PMID:23288152) RGD PMID:23288152 NCBI chr19:1,025,122...1,074,333
Ensembl chr19:1,023,683...1,074,365
JBrowse link
G Cldn5 claudin 5 ISO (PMID:23288152) RGD PMID:23288152 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G F11r F11 receptor ISO (PMID:26985018) RGD PMID:26985018 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Il4 interleukin 4 ISO (PMID:24280217) RGD PMID:24280217 NCBI chr10:38,963,979...38,969,531
Ensembl chr10:38,963,979...38,969,531
JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25651845)
Ensembl
UniProt
RGD
PMID:25651845 GO_REF:0000024, GO_REF:0000107 NCBI chr18:24,918,402...24,928,822
Ensembl chr18:24,918,398...24,929,091
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 ISO (PMID:24851274) RGD PMID:24851274 NCBI chr 8:21,984,914...21,995,806
Ensembl chr 8:21,984,914...21,995,806
JBrowse link
pulmonary artery endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17992660)
Ensembl
UniProt
RGD
PMID:17992660 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
regulation of endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apold1 apolipoprotein L domain containing 1 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15102925, PMID:21873635 RGD:1303988, RGD:13792537 NCBI chr 4:168,752,142...168,755,024
Ensembl chr 4:168,752,133...168,755,023
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A NOT ISO (MGI:MGI:4830635|PMID:20406889) RGD PMID:20406889 MGI:MGI:4830635 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO
ISS
(MGI:MGI:3640069|PMID:16680193)
GO_REF:0000024
RGD
UniProt
PMID:16680193 GO_REF:0000024, MGI:MGI:3640069 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Tgfb3 transforming growth factor, beta 3 TAS RGD PMID:12183510 RGD:727411 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:5543371|PMID:18772315) RGD PMID:18772315 MGI:MGI:5543371 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
regulation of endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 ISO (PMID:17895370) RGD PMID:17895370 NCBI chr 2:61,039,072...61,340,687
Ensembl chr 2:61,039,053...61,340,697
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO (PMID:16484616) RGD PMID:16484616 NCBI chr14:17,210,733...17,212,930
Ensembl chr14:17,210,733...17,212,930
JBrowse link
G Fgf1 fibroblast growth factor 1 ISO
ISS
(PMID:23469107)
GO_REF:0000024
RGD
UniProt
PMID:23469107 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Foxp1 forkhead box P1 ISO (PMID:24023716) RGD PMID:24023716 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta IEA
ISO
GO_REF:0000107
(PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr16:74,177,233...74,230,809
Ensembl chr16:74,177,215...74,230,815
JBrowse link
G Il1b interleukin 1 beta IEA
ISO
GO_REF:0000107
(PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Plcb1 phospholipase C beta 1 ISO (MGI:MGI:5904576|PMID:27653213) RGD PMID:27653213 MGI:MGI:5904576 NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
JBrowse link
G Ppp1r12a protein phosphatase 1, regulatory subunit 12A NOT ISO (PMID:25816133) RGD PMID:25816133 NCBI chr 7:51,404,971...51,515,382
Ensembl chr 7:51,404,919...51,515,373
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 IEA
ISO
GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 IEA
ISO
GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IEA
ISO
GO_REF:0000107
(PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 4:157,864,905...157,877,634
Ensembl chr 4:157,864,969...157,877,633
JBrowse link
G Vcl vinculin ISO
IEA
(PMID:26923917)
GO_REF:0000107
RGD
Ensembl
PMID:26923917 GO_REF:0000107 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 ISO (MGI:MGI:5904576|PMID:27653213) RGD PMID:27653213 MGI:MGI:5904576 NCBI chr 5:100,924,621...100,983,412
Ensembl chr 5:100,924,622...100,977,902
JBrowse link
regulation of transcription involved in lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 ISO (PMID:18815287) RGD PMID:18815287 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:18815287) RGD PMID:18815287 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
venous endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO (MGI:MGI:4837019|PMID:20890042) RGD PMID:20890042 MGI:MGI:4837019 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        tissue development 2099
          epithelium development 1263
            endothelium development 144
              endocardial endothelium development 0
              endothelial cell differentiation + 125
              glomerular endothelium development + 4
              morphogenesis of an endothelium + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.