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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell morphogenesis
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Accession:GO:0003382 term browser browse the term
Definition:The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.


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epithelial cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor IEA
ISO
GO_REF:0000107
MGI:1922269 (MGI:5050497|PMID:21084446)
Ensembl
RGD
PMID:21084446 GO_REF:0000107, MGI:5050497 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO MGI:3839578 (MGI:3838423|PMID:19251658) RGD PMID:19251658 MGI:3838423 NCBI chr 6:131,834,097...131,927,251
Ensembl chr 6:131,834,097...131,926,272
JBrowse link
G Cdh1 cadherin 1 ISO (MGI:5449145|PMID:22766025) RGD PMID:22766025 MGI:5449145 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cgn cingulin ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:195,909,691...195,937,130
Ensembl chr 2:195,909,626...195,935,878
JBrowse link
G Cldn3 claudin 3 ISS
ISO
GO_REF:0000024
(MGI:5499697|PMID:22696678)
UniProt
RGD
PMID:22696678 GO_REF:0000024, MGI:5499697 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Dact2 dishevelled-binding antagonist of beta-catenin 2 ISO (MGI:4833906|PMID:20685821) RGD PMID:20685821 MGI:4833906 NCBI chr 1:56,159,435...56,169,443
Ensembl chr 1:56,159,426...56,168,351
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921
JBrowse link
G Flnb filamin B ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr15:18,750,152...18,883,019
Ensembl chr15:18,750,118...18,883,005
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)
RGD PMID:22696678, PMID:25152456 MGI:5499697 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Hrh2 histamine receptor H 2 IEA
ISO
GO_REF:0000107
MGI:2182949 (MGI:1860000|PMID:10862789)
Ensembl
RGD
PMID:10862789 GO_REF:0000107, MGI:1860000 NCBI chr17:10,912,959...10,931,389
Ensembl chr17:10,921,507...10,952,441
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Jmjd1c jumonji domain containing 1C ISO MGI:5544070 (MGI:5529185|PMID:24006281) RGD PMID:24006281 MGI:5529185 NCBI chr20:22,751,743...22,914,080
Ensembl chr20:22,751,743...22,882,672
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:2676654 (MGI:5467663|PMID:23201579) RGD PMID:23201579 MGI:5467663 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207
JBrowse link
G Mir205 microRNA 205 ISO (MGI:4439000|PMID:20103531) RGD PMID:20103531 MGI:4439000 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO (PMID:32698519) RGD PMID:32698519 NCBI chr 9:26,164,969...26,736,704 JBrowse link
G Pof1b POF1B, actin binding protein ISO (PMID:21940798) RGD PMID:21940798 NCBI chr  X:84,099,618...84,167,717
Ensembl chr  X:84,099,618...84,167,717
JBrowse link
G Rab25 RAB25, member RAS oncogene family ISO (MGI:5499697|PMID:22696678) RGD PMID:22696678 MGI:5499697 NCBI chr 2:187,903,301...187,909,398
Ensembl chr 2:187,903,307...187,909,394
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 ISS
ISO
GO_REF:0000024
(MGI:5507904|PMID:23264467)
UniProt
RGD
PMID:23264467 GO_REF:0000024, MGI:5507904 NCBI chr12:37,490,320...37,528,393
Ensembl chr12:37,490,584...37,528,784
JBrowse link
G Rilpl2 Rab interacting lysosomal protein-like 2 ISS
ISO
GO_REF:0000024
(MGI:5507904|PMID:23264467)
UniProt
RGD
PMID:23264467 GO_REF:0000024, MGI:5507904 NCBI chr12:37,544,918...37,556,453
Ensembl chr12:37,544,918...37,556,453
JBrowse link
G Rnase10 ribonuclease A family member 10 ISO MGI:88064 (MGI:5050497|PMID:21084446) RGD PMID:21084446 MGI:5050497 NCBI chr15:27,930,581...27,933,873
Ensembl chr15:27,933,211...27,933,849
JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 ISO
ISS
(PMID:26231217)
(MGI:5697095|PMID:26231217)
GO_REF:0000024
RGD
UniProt
PMID:26231217 GO_REF:0000024, MGI:5697095 NCBI chr 1:87,260,832...87,467,846
Ensembl chr 1:87,260,835...87,468,288
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 IEA
ISO
GO_REF:0000002
MGI:5297726 (MGI:5297312|PMID:21991385)
InterPro
RGD
PMID:21991385 GO_REF:0000002, MGI:5297312 NCBI chr  X:112,268,786...112,303,849
Ensembl chr  X:112,270,986...112,303,846
JBrowse link
apical constriction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C ISO (PMID:30948426) RGD PMID:30948426 NCBI chr 6:124,905,811...125,028,011
Ensembl chr 6:124,905,808...125,027,553
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO (MGI:4438998|PMID:20103536) RGD PMID:20103536 MGI:4438998 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Frmd6 FERM domain containing 6 IEA
ISO
GO_REF:0000107
MGI:107927|MGI:2135608 (MGI:5086051|PMID:21685893)
Ensembl
RGD
PMID:21685893 GO_REF:0000107, MGI:5086051 NCBI chr 6:93,281,382...93,358,888
Ensembl chr 6:93,281,408...93,358,840
JBrowse link
G Pard3 par-3 family cell polarity regulator ISO MGI:107927|MGI:2442579 (MGI:5086051|PMID:21685893) RGD PMID:21685893 MGI:5086051 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 IEA
ISO
GO_REF:0000107
MGI:2135608|MGI:2442579 (MGI:5086051|PMID:21685893)
Ensembl
RGD
PMID:21685893 GO_REF:0000107, MGI:5086051 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 ISO MGI:5500046 (MGI:5486234|PMID:23372835) RGD PMID:23372835 MGI:5486234 NCBI chr 2:27,107,263...27,236,336
Ensembl chr 2:27,107,318...27,236,672
JBrowse link
G Clic4 chloride intracellular channel 4 IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107, MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Cnmd chondromodulin ISO
IBA
(MGI:2656472|PMID:12714610)
PMID:21873635
RGD PMID:12714610, PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr15:61,923,291...61,947,840
Ensembl chr15:61,923,299...61,947,764
JBrowse link
G Col15a1 collagen type XV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,840,360...62,950,240 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain ISO
IBA
(MGI:3046127|PMID:15188432)
PMID:21873635
RGD PMID:15188432, PMID:21873635 MGI:3046127, RGD:13792537 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,014,896...113,251,165
Ensembl chr 7:113,015,747...113,228,439
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,200,686...251,436,254
Ensembl chr 2:251,200,686...251,434,932
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 ISO MGI:3838392 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Hoxa13 homeo box A13 ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO MGI:2679939 (MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:3759000 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:2157527 (MGI:4940123|PMID:21285373) RGD PMID:21285373 MGI:4940123 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G LOC108348074 collagen alpha-1(XV) chain-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:64,475,618...64,543,510 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISO
GO_REF:0000107
(PMID:14500721)
Ensembl
RGD
PMID:14500721 GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO MGI:2677448 (MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:3723364 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
G Stc1 stanniocalcin 1 ISO (PMID:14500721) RGD PMID:14500721 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
G Tnmd tenomodulin ISO
IBA
(MGI:2656472|PMID:12714610)
PMID:21873635
RGD PMID:12714610, PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr  X:104,684,676...104,700,173
Ensembl chr  X:104,684,676...104,700,173
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4340678 (MGI:5634845|PMID:25758223) RGD PMID:25758223 MGI:5634845 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 ISO MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892
JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO MGI:1338031 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      anatomical structure development 6270
        cell development 2442
          epithelial cell development 286
            epithelial cell morphogenesis 49
              apical constriction + 5
              endothelial cell morphogenesis 18
              epithelial cell morphogenesis involved in gastrulation + 0
              epithelial cell morphogenesis involved in placental branching 3
Path 2
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      anatomical structure development 6270
        tissue development 2099
          epithelium development 1262
            epithelial cell differentiation 710
              epithelial cell development 286
                epithelial cell morphogenesis 49
                  apical constriction + 5
                  endothelial cell morphogenesis 18
                  epithelial cell morphogenesis involved in gastrulation + 0
                  epithelial cell morphogenesis involved in placental branching 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.