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ONTOLOGY REPORT - ANNOTATIONS


Term:axis elongation
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Accession:GO:0003401 term browser browse the term
Definition:The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.
Synonyms:related_synonym: elongation of an axis


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axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:2156191 (MGI:MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:MGI:4413372 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO
IBA
MGI:MGI:3640803 (MGI:MGI:4830023|PMID:20704721)
PMID:21873635
RGD PMID:20704721, PMID:21873635 MGI:MGI:4830023, RGD:13792537 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:MGI:1857617 (MGI:MGI:3833777|PMID:19100728), (MGI:MGI:4413372|PMID:19795512) RGD PMID:19100728, PMID:19795512 MGI:MGI:3833777, MGI:MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:98956 (MGI:MGI:1891551|PMID:11029008)
PMID:21873635
RGD PMID:11029008, PMID:21873635 MGI:MGI:1891551, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Med12 mediator complex subunit 12 ISO MGI:MGI:4839484 (MGI:MGI:4839483|PMID:20630950) RGD PMID:20630950 MGI:MGI:4839483 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:MGI:1298218 (MGI:MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:MGI:1891551 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:1857258 (MGI:MGI:3814777|PMID:18614704) RGD PMID:18614704 MGI:MGI:3814777 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
branch elongation involved in salivary gland morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647 (MGI:MGI:3703378|PMID:15972105) RGD PMID:15972105 MGI:MGI:3703378 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:1099809|MGI:MGI:2153811 (MGI:MGI:3703378|PMID:15972105) RGD PMID:15972105 MGI:MGI:3703378 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 ISO
ISS
(PMID:11731227)
GO_REF:0000024
RGD
UniProt
PMID:11731227 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
branch elongation of an epithelium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxd13 homeo box D13 ISO MGI:MGI:1857871 (MGI:MGI:86772|PMID:9097018) RGD PMID:9097018 MGI:MGI:86772 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(PMID:8674409)
GO_REF:0000107
RGD
Ensembl
PMID:8674409 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(MGI:MGI:3788965|PMID:18367557)
GO_REF:0000107
RGD
Ensembl
PMID:18367557 GO_REF:0000107, MGI:MGI:3788965 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1345138|MGI:MGI:1345139 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3629660 (MGI:MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO MGI:MGI:1099809|MGI:MGI:1345138 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO MGI:MGI:1099809|MGI:MGI:1345139 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO MGI:MGI:3053959|MGI:MGI:5316446 (MGI:MGI:5586932|PMID:25043473) RGD PMID:25043473 MGI:MGI:5586932 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (PMID:9740653) RGD PMID:9740653 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532)
GO_REF:0000107
RGD
Ensembl
PMID:9731532 GO_REF:0000107, MGI:MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO MGI:MGI:4124060 (MGI:MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tnc tenascin C IMP RGD PMID:16928692 RGD:4889612 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
convergent extension involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:108078|MGI:MGI:1860298 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
G Trim28 tripartite motif-containing 28 ISO MGI:MGI:1928907 (MGI:MGI:5300649|PMID:22110054) RGD PMID:22110054 MGI:MGI:5300649 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:3703464|PMID:17229766) RGD PMID:17229766 MGI:MGI:3703464 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:MGI:98958 (MGI:MGI:5634837|PMID:25813538) RGD PMID:25813538 MGI:MGI:5634837 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:101948|MGI:MGI:1857617 (MGI:MGI:5634837|PMID:25813538)
GO_REF:0000107
RGD
Ensembl
PMID:25813538 GO_REF:0000107, MGI:MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:108078|MGI:MGI:1860298 (MGI:MGI:3793375|PMID:18257070)
GO_REF:0000107
RGD
Ensembl
PMID:18257070 GO_REF:0000107, MGI:MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:3040993 (MGI:MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:MGI:4422106 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Esr1 estrogen receptor 1 ISO
IEA
MGI:MGI:2150897 (MGI:MGI:3629536|PMID:12021201)
GO_REF:0000107
RGD
Ensembl
PMID:12021201 GO_REF:0000107, MGI:MGI:3629536 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:3040993 (MGI:MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:MGI:4422106 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
epithelial cell proliferation involved in prostatic bud elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 ISO
ISS
MGI:MGI:2429649|MGI:MGI:3689997 (MGI:MGI:3794471|PMID:18325490)
GO_REF:0000024
RGD
UniProt
PMID:18325490 GO_REF:0000024, MGI:MGI:3794471 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(PMID:10706139), (PMID:17118062)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10706139, PMID:17118062 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
negative regulation of convergent extension involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkd1 NKD inhibitor of WNT signaling pathway 1 ISO (MGI:MGI:5437442|PMID:11274398) RGD PMID:11274398 MGI:MGI:5437442 NCBI chr19:19,434,720...19,509,087
Ensembl chr19:19,436,333...19,509,087
JBrowse link
negative regulation of planar cell polarity pathway involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:2135272 (MGI:MGI:3793375|PMID:18257070)
GO_REF:0000107
RGD
Ensembl
PMID:18257070 GO_REF:0000107, MGI:MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:1860298|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
planar cell polarity pathway involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:MGI:98958 (MGI:MGI:5634837|PMID:25813538) RGD PMID:25813538 MGI:MGI:5634837 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:101948|MGI:MGI:1857617 (MGI:MGI:5634837|PMID:25813538)
GO_REF:0000107
RGD
Ensembl
PMID:25813538 GO_REF:0000107, MGI:MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
primary prostatic bud elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO
IEA
(MGI:MGI:1335656|PMID:10208740)
GO_REF:0000107
RGD
Ensembl
PMID:10208740 GO_REF:0000107, MGI:MGI:1335656 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
prostate epithelial cord elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 ISO
IEA
MGI:MGI:2150897 (MGI:MGI:3834820|PMID:18535112)
GO_REF:0000107
RGD
Ensembl
PMID:18535112 GO_REF:0000107, MGI:MGI:3834820 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3044679 (MGI:MGI:3703455|PMID:17215304) RGD PMID:17215304 MGI:MGI:3703455 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
(MGI:MGI:3037217|PMID:15013801)
GO_REF:0000107
RGD
Ensembl
PMID:15013801 GO_REF:0000107, MGI:MGI:3037217 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
regulation of cell motility involved in somitogenic axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha ISO UniProtKB:F6T226 (PMID:15687260) RGD PMID:15687260 NCBI chr 8:109,481,352...109,621,462
Ensembl chr 8:109,482,614...109,621,408
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure morphogenesis 2872
        developmental growth involved in morphogenesis 279
          axis elongation 34
            axis elongation involved in somitogenesis + 5
            branch elongation of an epithelium + 22
            bud dilation involved in lung branching + 1
            convergent extension involved in axis elongation + 8
            planar cell polarity pathway involved in axis elongation + 6
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        anatomical structure morphogenesis 2872
          developmental growth involved in morphogenesis 279
            axis elongation 34
              axis elongation involved in somitogenesis + 5
              branch elongation of an epithelium + 22
              bud dilation involved in lung branching + 1
              convergent extension involved in axis elongation + 8
              planar cell polarity pathway involved in axis elongation + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.