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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA helicase activity
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Accession:GO:0003724 term browser browse the term
Definition:Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
Synonyms:exact_synonym: ATP-dependent RNA helicase activity
 alt_id: GO:0004004
 xref: EC:3.6.4.13;   reactome:R-HSA-72647 "Cap-bound mRNA is activated by helicases"


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RNA helicase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AQR aquarius intron-binding spliceosomal factor JBrowse link 15 34,851,782 34,969,742 RGD:2290271
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:2290271
G DDX1 DEAD-box helicase 1 JBrowse link 2 15,591,868 15,631,101 RGD:2290271
G DDX10 DEAD-box helicase 10 JBrowse link 11 108,665,069 108,940,927 RGD:2290271
G DDX11L8 DEAD/H-box helicase 11 like 8 JBrowse link 12 12,310 14,526 RGD:2290271
G DDX12P DEAD/H-box helicase 12, pseudogene JBrowse link 12 9,417,691 9,448,172 RGD:2290271
G DDX17 DEAD-box helicase 17 JBrowse link 22 38,483,438 38,506,311 RGD:2290271
G DDX18 DEAD-box helicase 18 JBrowse link 2 117,814,691 117,832,377 RGD:2290271
G DDX19A DEAD-box helicase 19A JBrowse link 16 70,346,829 70,373,383 RGD:2290271
G DDX19B DEAD-box helicase 19B JBrowse link 16 70,289,767 70,335,305 RGD:2290271
G DDX20 DEAD-box helicase 20 JBrowse link 1 111,755,901 111,768,000 RGD:2290271
G DDX21 DExD-box helicase 21 JBrowse link 10 68,956,131 68,985,069 RGD:2290271
G DDX23 DEAD-box helicase 23 JBrowse link 12 48,829,756 48,852,163 RGD:2290271
G DDX24 DEAD-box helicase 24 JBrowse link 14 94,048,287 94,081,202 RGD:2290271
G DDX25 DEAD-box helicase 25 JBrowse link 11 125,903,328 125,928,843 RGD:2290271
G DDX27 DEAD-box helicase 27 JBrowse link 20 49,219,295 49,244,077 RGD:2290271
G DDX28 DEAD-box helicase 28 JBrowse link 16 68,020,916 68,023,232 RGD:2290271
G DDX31 DEAD-box helicase 31 JBrowse link 9 132,592,997 132,670,401 RGD:2290271
G DDX39A DExD-box helicase 39A JBrowse link 19 14,408,798 14,419,383 RGD:2290271
G DDX39B DExD-box helicase 39B JBrowse link 6 31,530,226 31,542,003 RGD:2290271
G DDX3X DEAD-box helicase 3 X-linked JBrowse link X 41,333,308 41,364,472 RGD:2290271
G DDX3Y DEAD-box helicase 3 Y-linked JBrowse link Y 12,903,999 12,920,478 RGD:2290271
G DDX4 DEAD-box helicase 4 JBrowse link 5 55,737,994 55,817,157 RGD:2290271
G DDX41 DEAD-box helicase 41 JBrowse link 5 177,511,577 177,516,961 RGD:2290271
G DDX42 DEAD-box helicase 42 JBrowse link 17 63,773,856 63,819,317 RGD:2290271
G DDX43 DEAD-box helicase 43 JBrowse link 6 73,394,828 73,417,566 RGD:2290271
G DDX46 DEAD-box helicase 46 JBrowse link 5 134,758,778 134,831,121 RGD:2290271
G DDX47 DEAD-box helicase 47 JBrowse link 12 12,813,346 12,829,981 RGD:2290271
G DDX49 DEAD-box helicase 49 JBrowse link 19 18,919,703 18,928,630 RGD:2290271
G DDX5 DEAD-box helicase 5 JBrowse link 17 64,498,254 64,506,866 RGD:2290271
G DDX50 DExD-box helicase 50 JBrowse link 10 68,898,817 68,956,312 RGD:2290271
G DDX51 DEAD-box helicase 51 JBrowse link 12 132,136,594 132,144,335 RGD:2290271
G DDX52 DExD-box helicase 52 JBrowse link 17 37,609,739 37,643,448 RGD:2290271
G DDX53 DEAD-box helicase 53 JBrowse link X 22,999,960 23,003,589 RGD:2290271
G DDX54 DEAD-box helicase 54 JBrowse link 12 113,157,173 113,185,478 RGD:2290271
G DDX55 DEAD-box helicase 55 JBrowse link 12 123,602,089 123,620,943 RGD:2290271
G DDX56 DEAD-box helicase 56 JBrowse link 7 44,565,417 44,574,538 RGD:2290271
G DDX58 DExD/H-box helicase 58 JBrowse link 9 32,455,302 32,526,196 RGD:2290271
G DDX59 DEAD-box helicase 59 JBrowse link 1 200,640,805 200,669,998 RGD:2290271
G DDX6 DEAD-box helicase 6 JBrowse link 11 118,747,763 118,791,696 RGD:2290271
G DDX60 DExD/H-box helicase 60 JBrowse link 4 168,216,293 168,325,981 RGD:2290271
G DDX60L DExD/H-box 60 like JBrowse link 4 168,356,735 168,480,514 RGD:2290271
G DHX15 DEAH-box helicase 15 JBrowse link 4 24,527,475 24,584,554 RGD:2290271
G DHX16 DEAH-box helicase 16 JBrowse link 6 30,653,119 30,673,053 RGD:2290271
G DHX29 DExH-box helicase 29 JBrowse link 5 55,256,055 55,307,694 RGD:2290271
G DHX30 DExH-box helicase 30 JBrowse link 3 47,802,909 47,850,196 RGD:2290271
G DHX32 DEAH-box helicase 32 (putative) JBrowse link 10 125,836,337 125,881,292 RGD:2290271
G DHX33 DEAH-box helicase 33 JBrowse link 17 5,440,917 5,469,055 RGD:2290271
G DHX34 DExH-box helicase 34 JBrowse link 19 47,349,315 47,382,704 RGD:2290271
G DHX35 DEAH-box helicase 35 JBrowse link 20 38,962,344 39,039,723 RGD:2290271
G DHX36 DEAH-box helicase 36 JBrowse link 3 154,272,546 154,324,497 RGD:2290271
G DHX37 DEAH-box helicase 37 JBrowse link 12 124,946,824 124,989,131 RGD:2290271
G DHX38 DEAH-box helicase 38 JBrowse link 16 72,093,665 72,112,912 RGD:2290271
G DHX40 DEAH-box helicase 40 JBrowse link 17 59,565,563 59,608,345 RGD:2290271
G DHX57 DExH-box helicase 57 JBrowse link 2 38,797,729 38,875,934 RGD:2290271
G DHX58 DExH-box helicase 58 JBrowse link 17 42,101,404 42,112,721 RGD:2290271
G DHX8 DEAH-box helicase 8 JBrowse link 17 43,483,865 43,544,799 RGD:2290271
G DHX9 DExH-box helicase 9 JBrowse link 1 182,839,347 182,887,982 RGD:2290271
G EIF4A1 eukaryotic translation initiation factor 4A1 JBrowse link 17 7,572,825 7,579,006 RGD:2290271
G EIF4A2 eukaryotic translation initiation factor 4A2 JBrowse link 3 186,783,577 186,789,897 RGD:2290271
G EIF4A3 eukaryotic translation initiation factor 4A3 JBrowse link 17 80,134,369 80,147,128 RGD:2290271
G FANCM FA complementation group M JBrowse link 14 45,135,930 45,200,890 RGD:2290271
G G3BP1 G3BP stress granule assembly factor 1 JBrowse link 5 151,771,954 151,812,785 RGD:2290271
G HELQ helicase, POLQ like JBrowse link 4 83,407,343 83,455,883 RGD:2290271
G HELZ2 helicase with zinc finger 2 JBrowse link 20 63,558,086 63,574,239 RGD:2290271
G HFM1 helicase for meiosis 1 JBrowse link 1 91,260,766 91,408,008 RGD:2290271
G IFIH1 interferon induced with helicase C domain 1 JBrowse link 2 162,267,074 162,318,684 RGD:2290271
G MOV10L1 Mov10 like RISC complex RNA helicase 1 JBrowse link 22 50,090,006 50,161,705 RGD:2290271
G MTREX Mtr4 exosome RNA helicase JBrowse link 5 55,307,989 55,425,579 RGD:2290271
G RAD54B RAD54 homolog B JBrowse link 8 94,371,960 94,475,115 RGD:2290271
G SKIV2L Ski2 like RNA helicase JBrowse link 6 31,959,157 31,969,852 RGD:2290271
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 2 96,274,338 96,305,546 RGD:2290271
G SUPV3L1 Suv3 like RNA helicase JBrowse link 10 69,180,234 69,209,093 RGD:2290271
G TDRD12 tudor domain containing 12 JBrowse link 19 32,719,767 32,829,580 RGD:2290271
G TDRD9 tudor domain containing 9 JBrowse link 14 103,928,343 104,052,667 RGD:2290271
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,831,405 18,868,230 RGD:2290271
3'-5' RNA helicase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DHX9 DExH-box helicase 9 JBrowse link 1 182,839,347 182,887,982 RGD:2290271
G SUPV3L1 Suv3 like RNA helicase JBrowse link 10 69,180,234 69,209,093 RGD:2290271
G YTHDC2 YTH domain containing 2 JBrowse link 5 113,513,683 113,595,284 RGD:2290271
5'-3' RNA helicase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IGHMBP2 immunoglobulin mu DNA binding protein 2 JBrowse link 11 68,903,855 68,940,601 RGD:2290271
G MOV10 Mov10 RISC complex RNA helicase JBrowse link 1 112,674,312 112,702,377 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17874
    catalytic activity 5932
      catalytic activity, acting on RNA 405
        RNA helicase activity 79
          3'-5' RNA helicase activity 3
          5'-3' RNA helicase activity 2
Path 2
Term Annotations click to browse term
  molecular_function 17874
    catalytic activity 5932
      hydrolase activity 2599
        hydrolase activity, acting on acid anhydrides 892
          hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 892
            pyrophosphatase activity 889
              nucleoside-triphosphatase activity 833
                ATPase activity 450
                  ATPase activity, coupled 297
                    helicase activity 165
                      RNA helicase activity 79
                        3'-5' RNA helicase activity 3
                        5'-3' RNA helicase activity 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.