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ONTOLOGY REPORT - ANNOTATIONS


Term:integrin binding
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Accession:GO:0005178 term browser browse the term
Definition:Interacting selectively and non-covalently with an integrin.
Synonyms:narrow_synonym: integrin ligand


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integrin binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:1600115
RGD:1624291
G Adam15 ADAM metallopeptidase domain 15 JBrowse link 2 188,661,831 188,672,337 RGD:1624291
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:1624291
RGD:1600115
G Adam9 ADAM metallopeptidase domain 9 JBrowse link 16 71,810,377 71,887,926 RGD:1624291
G Angptl3 angiopoietin-like 3 JBrowse link 5 117,698,590 117,706,729 RGD:1624291
G Anp32a acidic nuclear phosphoprotein 32 family member A JBrowse link 8 67,295,578 67,333,075 RGD:10401134
G Anxa7 annexin A7 JBrowse link 15 4,254,470 4,281,296 RGD:1624291
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Calr calreticulin JBrowse link 19 25,956,771 25,961,666 RGD:1624291
G Casr calcium-sensing receptor JBrowse link 11 67,188,204 67,262,261 RGD:7205691
G Ccn1 cellular communication network factor 1 JBrowse link 2 251,529,354 251,532,312 RGD:1624291
RGD:13792537
RGD:1600115
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:1624291
RGD:13792537
G Ccn3 cellular communication network factor 3 JBrowse link 7 94,375,134 94,382,154 RGD:1624291
RGD:13792537
G Ccn4 cellular communication network factor 4 JBrowse link 7 107,695,227 107,723,759 RGD:13792537
G Ccn5 cellular communication network factor 5 JBrowse link 3 160,207,969 160,219,316 RGD:14390054
RGD:13792537
G Ccn6 cellular communication network factor 6 JBrowse link 20 44,237,491 44,255,064 RGD:13792537
G Cd151 CD151 molecule (Raph blood group) JBrowse link 1 214,446,659 214,450,668 RGD:9698434
RGD:1624291
G Cd177 CD177 molecule JBrowse link 1 82,964,683 82,987,306 RGD:1624291
G Cd226 CD226 molecule JBrowse link 18 86,299,392 86,394,772 RGD:1624291
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:1624291
RGD:1600115
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1600115
RGD:1624291
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:2302243
RGD:1624291
RGD:9698434
G Cdh17 cadherin 17 JBrowse link 5 25,354,187 25,443,675 RGD:1624291
G Cdh26 cadherin 26 JBrowse link 3 173,969,004 174,020,867 RGD:1624291
G Cib2 calcium and integrin binding family member 2 JBrowse link 8 59,123,078 59,139,946 RGD:1624291
G Col16a1 collagen type XVI alpha 1 chain JBrowse link 5 148,257,030 148,311,645 RGD:1624291
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:1624291
G Col4a3 collagen type IV alpha 3 chain JBrowse link 9 88,357,528 88,484,735 RGD:1624291
G Comp cartilage oligomeric matrix protein JBrowse link 16 20,798,437 20,807,070 RGD:1624291
RGD:1600115
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:1600115
RGD:1624291
G Cxadr CXADR, Ig-like cell adhesion molecule JBrowse link 11 16,826,269 16,873,564 RGD:1624291
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:1624291
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1624291
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:2325671
G Dst dystonin JBrowse link 9 37,902,336 38,296,961 RGD:1624291
G Edil3 EGF like repeats and discoidin domains 3 JBrowse link 2 17,616,116 18,128,514 RGD:1600115
G Egfl6 EGF-like-domain, multiple 6 JBrowse link X 29,430,789 29,488,737 RGD:1600115
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:5131469
G Emp2 epithelial membrane protein 2 JBrowse link 10 5,433,248 5,467,840 RGD:1624291
G Esm1 endothelial cell-specific molecule 1 JBrowse link 2 45,104,392 45,113,130 RGD:1624291
RGD:13792537
G F11r F11 receptor JBrowse link 13 89,826,272 89,850,151 RGD:1624291
G Fap fibroblast activation protein, alpha JBrowse link 3 48,467,781 48,536,242 RGD:1624291
G Fbln1 fibulin 1 JBrowse link 7 126,096,793 126,176,468 RGD:1624291
G Fbln5 fibulin 5 JBrowse link 6 125,644,797 125,723,957 RGD:1624291
RGD:1600115
G Fbn1 fibrillin 1 JBrowse link 3 117,569,708 117,766,160 RGD:1624291
G Fermt1 fermitin family member 1 JBrowse link 3 125,566,744 125,607,864 RGD:13792537
G Fermt2 fermitin family member 2 JBrowse link 15 19,807,806 19,876,557 RGD:13792537
G Fermt3 fermitin family member 3 JBrowse link 1 222,254,183 222,272,775 RGD:1624291
RGD:13792537
G Fgf1 fibroblast growth factor 1 JBrowse link 18 32,273,830 32,359,831 RGD:1624291
RGD:1600115
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:1600115
RGD:1624291
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:1600115
RGD:13792537
RGD:1624291
G Frmd5 FERM domain containing 5 JBrowse link 3 113,480,780 113,755,286 RGD:1624291
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:8554200
G Gfra1 GDNF family receptor alpha 1 JBrowse link 1 279,203,046 279,572,789 RGD:2325691
G Gpnmb glycoprotein nmb JBrowse link 4 78,694,447 78,715,685 RGD:1624291
RGD:13792537
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:2325671
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:1624291
G Ibsp integrin-binding sialoprotein JBrowse link 14 6,801,200 6,813,987 RGD:1600115
RGD:1624291
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:1582375
RGD:1624291
RGD:13792537
G Icam2 intercellular adhesion molecule 2 JBrowse link 10 94,569,889 94,581,218 RGD:1624291
RGD:13792537
G Icam4 intercellular adhesion molecule 4, Landsteiner-Wiener blood group JBrowse link 8 22,047,697 22,048,793 RGD:13792537
G Icam5 intercellular adhesion molecule 5 JBrowse link 8 22,050,222 22,057,209 RGD:13792537
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:1600115
RGD:1624291
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1600115
RGD:1624291
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:2302097
G Isg15 ISG15 ubiquitin-like modifier JBrowse link 5 173,624,862 173,629,124 RGD:1624291
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:1625131
G Itga3 integrin subunit alpha 3 JBrowse link 10 82,855,841 82,887,755 RGD:2325828
G Itga5 integrin subunit alpha 5 JBrowse link 7 144,970,444 144,993,652 RGD:2314623
RGD:1624291
G Itga6 integrin subunit alpha 6 JBrowse link 3 58,442,904 58,515,124 RGD:1624291
G Itga7 integrin subunit alpha 7 JBrowse link 7 3,355,079 3,383,886 RGD:70774
G Itgav integrin subunit alpha V JBrowse link 3 71,113,269 71,205,958 RGD:1624291
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1625131
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2325828
RGD:2314623
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
G Itgb1bp2 integrin subunit beta 1 binding protein 2 JBrowse link X 71,342,770 71,347,623 RGD:1582492
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:13792537
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
RGD:1600115
G Itgb4 integrin subunit beta 4 JBrowse link 10 104,524,000 104,560,180 RGD:13792537
G Itgb5 integrin subunit beta 5 JBrowse link 11 70,056,500 70,172,164 RGD:1624291
G Itgb6 integrin subunit beta 6 JBrowse link 3 46,652,624 46,775,362 RGD:1624291
RGD:13792537
G Itgb7 integrin subunit beta 7 JBrowse link 7 143,820,236 143,837,802 RGD:13792537
G Itgb8 integrin subunit beta 8 JBrowse link 6 147,089,280 147,172,846 RGD:13792537
G Itgbl1 integrin subunit beta like 1 JBrowse link 15 110,114,148 110,378,970 RGD:13792537
G Jam2 junctional adhesion molecule 2 JBrowse link 11 24,235,310 24,285,279 RGD:1624291
G Jam3 junctional adhesion molecule 3 JBrowse link 8 28,147,110 28,208,466 RGD:1624291
G Jaml junction adhesion molecule like JBrowse link 8 49,378,644 49,408,894 RGD:1624291
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:1624291
RGD:1600115
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:1624291
G Lama3 laminin subunit alpha 3 JBrowse link 18 3,704,866 3,941,215 RGD:13792537
G Lama5 laminin subunit alpha 5 JBrowse link 3 175,553,042 175,601,112 RGD:1624291
RGD:13792537
G Lamb1 laminin subunit beta 1 JBrowse link 6 50,528,796 50,596,593 RGD:1624291
RGD:13792537
G Lamb2 laminin subunit beta 2 JBrowse link 8 117,268,335 117,280,517 RGD:1624291
RGD:13792537
RGD:1600115
G Lamb3 laminin subunit beta 3 JBrowse link 13 112,031,614 112,073,187 RGD:13792537
G Lcp1 lymphocyte cytosolic protein 1 JBrowse link 15 57,170,566 57,277,811 RGD:1624291
G Lgals5 lectin, galactose binding, soluble 5 JBrowse link 10 66,226,015 66,229,293 RGD:13792537
G Lgals8 galectin 8 JBrowse link 17 66,487,451 66,515,316 RGD:1624291
RGD:13792537
RGD:1600115
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link 5 16,526,058 16,642,648 RGD:2303714
G Mfge8 milk fat globule EGF and factor V/VIII domain containing JBrowse link 1 140,845,478 140,860,882 RGD:1600115
RGD:1624291
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:2307395
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:1624291
G Myh9l1 myosin heavy chain 9-like 1 JBrowse link 7 118,991,251 119,071,722 RGD:1600115
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:1599274
G Nisch nischarin JBrowse link 16 7,254,372 7,290,670 RGD:1624291
G Npnt nephronectin JBrowse link 2 238,001,767 238,068,886 RGD:1624291
RGD:1600115
G Nrg1 neuregulin 1 JBrowse link 16 62,969,573 64,065,063 RGD:1600115
RGD:1624291
G P4hb prolyl 4-hydroxylase subunit beta JBrowse link 10 109,736,459 109,748,070 RGD:1624291
G Plpp3 phospholipid phosphatase 3 JBrowse link 5 124,690,214 124,765,499 RGD:1624291
RGD:1600115
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:1624291
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:2325674
RGD:1624291
RGD:1600115
RGD:2325691
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:1624291
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 JBrowse link 18 63,415,298 63,489,240 RGD:1624291
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 JBrowse link 4 49,941,046 50,140,764 RGD:1600115
RGD:1624291
G Pxn paxillin JBrowse link 12 46,797,953 46,845,107 RGD:2325674
G S1pr2 sphingosine-1-phosphate receptor 2 JBrowse link 8 21,984,914 21,995,806 RGD:1624291
G S1pr3 sphingosine-1-phosphate receptor 3 JBrowse link 17 13,799,383 13,812,877 RGD:1624291
G Sema7a semaphorin 7A (John Milton Hagen blood group) JBrowse link 8 62,723,788 62,746,530 RGD:1624291
RGD:13792537
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 2 182,723,732 182,731,277 RGD:1624291
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:1624291
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1624291
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:1624291
RGD:1600115
G Tcam1 testicular cell adhesion molecule 1 JBrowse link 10 94,466,351 94,478,591 RGD:13792537
G Tgfbi transforming growth factor, beta induced JBrowse link 17 8,400,123 8,429,338 RGD:1600115
G Thbs1 thrombospondin 1 JBrowse link 3 109,862,120 109,873,466 RGD:1624291
G Thbs4 thrombospondin 4 JBrowse link 2 22,343,727 22,385,855 RGD:1600115
RGD:1624291
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:1600115
RGD:13792537
RGD:1624291
RGD:12793016
G Timp2 TIMP metallopeptidase inhibitor 2 JBrowse link 10 107,338,465 107,386,072 RGD:1598578
RGD:1624291
G Tln1 talin 1 JBrowse link 5 59,033,635 59,063,592 RGD:2325674
RGD:13792537
RGD:1624291
G Tln2 talin 2 JBrowse link 8 73,009,980 73,441,536 RGD:13792537
G Tnn tenascin N JBrowse link 13 77,829,384 77,896,831 RGD:1624291
RGD:13792537
G Tnr tenascin R JBrowse link 13 77,602,249 77,678,385 RGD:2325684
G Tspan4 tetraspanin 4 JBrowse link 1 214,454,090 214,473,789 RGD:1624291
G Tspan8 tetraspanin 8 JBrowse link 7 58,814,805 58,847,564 RGD:9698434
G Utrn utrophin JBrowse link 1 6,451,809 6,970,040 RGD:1624291
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:727551
RGD:13792537
RGD:1624291
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:1624291
G Vwf von Willebrand factor JBrowse link 4 158,085,059 158,219,525 RGD:1600115
RGD:1624291
integrin binding involved in cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Emilin1 elastin microfibril interfacer 1 JBrowse link 6 26,821,249 26,829,013 RGD:1624291
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 JBrowse link 7 12,918,352 12,922,509 RGD:1624291
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19678
    binding 16040
      protein-containing complex binding 1525
        integrin binding 139
          integrin binding involved in cell-matrix adhesion 2
Path 2
Term Annotations click to browse term
  molecular_function 19678
    binding 16040
      protein binding 12738
        signaling receptor binding 1705
          integrin binding 139
            integrin binding involved in cell-matrix adhesion 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.