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ONTOLOGY REPORT - ANNOTATIONS


Term:spliceosomal complex
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Accession:GO:0005681 term browser browse the term
Definition:Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
Synonyms:exact_synonym: spliceosome complex
 broad_synonym: spliceosome
 xref: Wikipedia:Spliceosome


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spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07008904.1 RGD:1600115
G AABR07054367.1 RGD:1600115
G AABR07061152.1 RGD:13792537
G AC096024.2 RGD:1600115
G AC117925.2 RGD:13792537
G Api5 apoptosis inhibitor 5 JBrowse link 3 83,310,878 83,336,053 RGD:1624291
G Aqr aquarius intron-binding spliceosomal factor JBrowse link 3 105,570,399 105,640,431 RGD:13792537
G Bcas2 BCAS2, pre-mRNA processing factor JBrowse link 2 205,662,633 205,670,514 RGD:1624291
G Bud31 BUD31 homolog JBrowse link 12 11,232,963 11,240,449 RGD:13792537
G Cactin cactin, spliceosome C complex subunit JBrowse link 7 11,258,526 11,266,509 RGD:13792537
G Cirbp cold inducible RNA binding protein JBrowse link 7 12,400,066 12,405,054 RGD:13792537
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 6 18,349,226 18,351,540 RGD:1624291
RGD:1600115
G Ctnnbl1 catenin, beta like 1 JBrowse link 3 154,212,245 154,373,170 RGD:1624291
RGD:13792537
RGD:1600115
G Cwc15 CWC15 spliceosome-associated protein JBrowse link 8 12,994,131 13,004,958 RGD:1624291
RGD:1600115
G Cwc22 CWC22 spliceosome associated protein homolog JBrowse link 3 64,731,145 64,780,127 RGD:1624291
G Ddx39b DExD-box helicase 39B JBrowse link 20 4,806,103 4,818,600 RGD:1624291
G Ddx41 DEAD-box helicase 41 JBrowse link 17 9,631,925 9,637,317 RGD:1624291
RGD:13792537
G Dhx15 DEAH-box helicase 15 JBrowse link 14 61,136,740 61,174,880 RGD:13792537
G Dhx16 DEAH-box helicase 16 JBrowse link 20 3,368,971 3,386,087 RGD:1624291
RGD:13792537
G Dhx32 DEAH-box helicase 32 (putative) JBrowse link 1 205,789,442 205,848,727 RGD:13792537
G Dhx38 DEAH-box helicase 38 JBrowse link 19 42,110,291 42,127,540 RGD:13792537
G Dhx40 DEAH-box helicase 40 JBrowse link 10 74,081,442 74,119,032 RGD:13792537
G Dqx1 DEAQ box RNA-dependent ATPase 1 JBrowse link 4 113,890,201 113,899,355 RGD:13792537
G Gemin2 gem (nuclear organelle) associated protein 2 JBrowse link 6 80,108,751 80,122,382 RGD:1600115
G Gpkow G patch domain and KOW motifs JBrowse link X 15,636,567 15,651,332 RGD:1624291
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:1600115
RGD:1624291
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:1624291
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 15 28,486,605 28,517,353 RGD:1624291
RGD:1600115
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:1624291
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:1600115
G Khdc4 KH domain containing 4, pre-mRNA splicing factor JBrowse link 2 188,051,657 188,080,280 RGD:1624291
G Lgals3 galectin 3 JBrowse link 15 24,153,602 24,165,537 RGD:1600115
G LOC102548514 crooked neck-like protein 1-like JBrowse link 3 140,125,232 140,141,730 RGD:1600115
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 4 87,016,003 87,019,219 RGD:1600115
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:13792537
G Prpf18 pre-mRNA processing factor 18 JBrowse link 17 77,601,914 77,632,507 RGD:1600115
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 2 223,261,444 223,323,075 RGD:1624291
G Rbm3 RNA binding motif protein 3 JBrowse link X 15,098,880 15,102,344 RGD:13792537
G Rbm5 RNA binding motif protein 5 JBrowse link 8 116,502,941 116,532,178 RGD:1600115
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:13792537
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:13792537
G Rbmxl1b RNA binding motif protein, X-linked-like 1B JBrowse link 4 42,186,612 42,188,294 RGD:13792537
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J JBrowse link Y 380,337 390,669 RGD:13792537
G RGD1305178 similar to Hypothetical protein MGC11690 JBrowse link 3 9,813,914 9,822,222 RGD:13792537
G Rheb Ras homolog, mTORC1 binding JBrowse link 4 6,827,429 6,873,384 RGD:1624291
RGD:1600115
G Sf1 splicing factor 1 JBrowse link 1 221,735,512 221,749,216 RGD:1624291
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 14 84,393,182 84,413,931 RGD:1624291
G Sf3a2 splicing factor 3a, subunit 2 JBrowse link 7 11,777,826 11,784,373 RGD:1624291
G Sf3a3 splicing factor 3a, subunit 3 JBrowse link 5 142,702,721 142,722,350 RGD:1624291
RGD:13792537
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 1 220,645,685 220,665,611 RGD:1624291
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 2 198,312,428 198,317,180 RGD:1624291
RGD:13792537
G Slu7 SLU7 homolog, splicing factor JBrowse link 10 29,029,556 29,044,919 RGD:1624291
RGD:13792537
RGD:1304333
G Smndc1 survival motor neuron domain containing 1 JBrowse link 1 274,096,068 274,107,138 RGD:1600115
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:1624291
RGD:13792537
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link 1 101,367,470 101,388,153 RGD:1600115
RGD:1624291
G Snrpa small nuclear ribonucleoprotein polypeptide A JBrowse link 1 83,999,670 84,008,429 RGD:1624291
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 1 126,961,389 126,974,453 RGD:1624291
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link 3 137,138,082 137,147,575 RGD:1624291
G Snrpep2 small nuclear ribonucleoprotein polypeptide E pseudogene 2 JBrowse link 1 141,503,818 141,504,126 RGD:1600115
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:1624291
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Srek1 splicing regulatory glutamic acid and lysine rich protein 1 JBrowse link 2 33,806,035 33,841,594 RGD:1600115
G Srrm1 serine and arginine repetitive matrix 1 JBrowse link 5 153,675,619 153,708,187 RGD:1624291
G Srsf2 serine and arginine rich splicing factor 2 JBrowse link 10 105,792,779 105,795,986 RGD:1624291
G Sugp1 SURP and G patch domain containing 1 JBrowse link 16 21,100,923 21,131,795 RGD:1600115
G Tfip11 tuftelin interacting protein 11 JBrowse link 12 50,320,820 50,333,052 RGD:1624291
RGD:1600115
G Tra2a transformer 2 alpha homolog JBrowse link 4 78,905,380 78,924,203 RGD:13792537
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:1624291
RGD:13792537
G U2af1 U2 small nuclear RNA auxiliary factor 1 JBrowse link 20 10,396,652 10,407,564 RGD:1624291
RGD:13792537
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 JBrowse link 1 89,017,414 89,019,651 RGD:13792537
G U2af2 U2 small nuclear RNA auxiliary factor 2 JBrowse link 1 72,312,260 72,329,828 RGD:1624291
G Wac WW domain containing adaptor with coiled-coil JBrowse link 17 60,887,606 60,946,630 RGD:1624291
G Wbp11 WW domain binding protein 11 JBrowse link 4 170,772,166 170,785,613 RGD:13792537
G Wbp11l1 WW domain-binding protein 11-like 1 JBrowse link 4 170,154,257 170,167,724 RGD:13792537
G Wbp4 WW domain binding protein 4 JBrowse link 15 61,745,989 61,772,516 RGD:1624291
G Wdr83 WD repeat domain 83 JBrowse link 19 26,188,644 26,194,193 RGD:1624291
G Zfp830 zinc finger protein 830 JBrowse link 10 70,118,250 70,119,714 RGD:1600115
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 JBrowse link 14 107,750,162 107,751,895 RGD:1624291
RGD:13792537
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 JBrowse link X 32,304,707 32,327,419 RGD:13792537
catalytic step 2 spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07042226.1 RGD:13792537
G AC126899.1 RGD:13792537
G Alyref Aly/REF export factor JBrowse link 10 109,768,593 109,774,639 RGD:1624291
G Aqr aquarius intron-binding spliceosomal factor JBrowse link 3 105,570,399 105,640,431 RGD:1624291
RGD:13792537
G Bcas2 BCAS2, pre-mRNA processing factor JBrowse link 2 205,662,633 205,670,514 RGD:13792537
G Cactin cactin, spliceosome C complex subunit JBrowse link 7 11,258,526 11,266,509 RGD:1624291
G Cdc40 cell division cycle 40 JBrowse link 20 48,503,973 48,574,546 RGD:1624291
RGD:13792537
G Cdc5l cell division cycle 5-like JBrowse link 9 17,949,764 17,988,514 RGD:1624291
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 6 18,349,226 18,351,540 RGD:1624291
RGD:13792537
G Cwc15 CWC15 spliceosome-associated protein JBrowse link 8 12,994,131 13,004,958 RGD:1624291
RGD:13792537
G Cwc22 CWC22 spliceosome associated protein homolog JBrowse link 3 64,731,145 64,780,127 RGD:1624291
RGD:13792537
G Cwc27 CWC27 spliceosome associated cyclophilin JBrowse link 2 34,716,420 34,923,060 RGD:1624291
G Ddx23 DEAD-box helicase 23 JBrowse link 7 140,325,453 140,342,730 RGD:1624291
RGD:13792537
G Ddx41 DEAD-box helicase 41 JBrowse link 17 9,631,925 9,637,317 RGD:1624291
G Ddx5 DEAD-box helicase 5 JBrowse link 10 94,979,759 94,988,461 RGD:1624291
G Dhx35 DEAH-box helicase 35 JBrowse link 3 155,297,545 155,354,857 RGD:1624291
RGD:13792537
G Dhx38 DEAH-box helicase 38 JBrowse link 19 42,110,291 42,127,540 RGD:1624291
G Dhx8 DEAH-box helicase 8 JBrowse link 10 89,645,979 89,683,839 RGD:1624291
RGD:13792537
G Eftud2 elongation factor Tu GTP binding domain containing 2 JBrowse link 10 90,932,071 90,983,971 RGD:1624291
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:1624291
RGD:13792537
G Ess2 ess-2 splicing factor homolog JBrowse link 11 87,224,371 87,234,329 RGD:1624291
G Frg1 FSHD region gene 1 JBrowse link 16 53,957,858 53,978,865 RGD:1624291
RGD:13792537
G Gpatch1 G patch domain containing 1 JBrowse link 1 91,529,096 91,578,032 RGD:1624291
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:1624291
RGD:1600115
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:1600115
RGD:1624291
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 JBrowse link 3 62,481,222 62,491,356 RGD:1624291
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 15 28,486,605 28,517,353 RGD:1624291
G Hnrnpf heterogeneous nuclear ribonucleoprotein F JBrowse link 4 149,957,143 149,978,896 RGD:1624291
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 JBrowse link 10 35,872,619 35,879,911 RGD:1600115
RGD:1624291
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:1624291
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:1624291
RGD:1600115
G Hnrnpr heterogeneous nuclear ribonucleoprotein R JBrowse link 5 154,668,194 154,699,967 RGD:1624291
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1600115
RGD:13792537
RGD:1624291
G Isy1 ISY1 splicing factor homolog JBrowse link 4 119,721,659 119,742,349 RGD:1624291
RGD:13792537
G LOC102548514 crooked neck-like protein 1-like JBrowse link 3 140,125,232 140,141,730 RGD:13792537
G LOC500684 hypothetical protein LOC500684 JBrowse link 6 103,932,428 103,935,122 RGD:13792537
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G JBrowse link 1 91,588,215 91,588,629 RGD:13792537
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 20 4,966,817 4,970,567 RGD:1624291
RGD:13792537
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 4 123,162,086 123,168,330 RGD:1624291
RGD:13792537
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 7 11,724,932 11,732,020 RGD:13792537
G Magoh mago homolog, exon junction complex subunit JBrowse link 5 127,480,465 127,487,617 RGD:1624291
RGD:13792537
G Magohb mago homolog B, exon junction complex subunit JBrowse link 4 165,514,584 165,522,366 RGD:13792537
G Mtrex Mtr4 exosome RNA helicase JBrowse link 2 44,726,716 44,787,013 RGD:1624291
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 7 75,409,581 75,421,874 RGD:1624291
G Plrg1 pleiotropic regulator 1 JBrowse link 2 182,040,338 182,056,669 RGD:1624291
RGD:13792537
G Pnn pinin, desmosome associated protein JBrowse link 6 80,159,364 80,167,677 RGD:1624291
RGD:13792537
G Ppie peptidylprolyl isomerase E JBrowse link 5 140,822,141 140,835,244 RGD:1624291
G Ppil1 peptidylprolyl isomerase like 1 JBrowse link 20 6,515,638 6,864,571 RGD:1624291
G Ppil3 peptidylprolyl isomerase like 3 JBrowse link 9 65,315,407 65,329,145 RGD:1624291
G Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 JBrowse link 2 34,288,853 34,313,094 RGD:1624291
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
RGD:13792537
G Prpf4b pre-mRNA processing factor 4B JBrowse link 17 30,680,454 30,714,542 RGD:1624291
G Prpf6 pre-mRNA processing factor 6 JBrowse link 3 177,098,137 177,162,937 RGD:1624291
RGD:13792537
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:1624291
RGD:13792537
G Raly RALY heterogeneous nuclear ribonucleoprotein JBrowse link 3 150,322,834 150,387,345 RGD:1624291
G Rbm22 RNA binding motif protein 22 JBrowse link 18 55,828,158 55,839,421 RGD:1624291
G Rbm8a RNA binding motif protein 8A JBrowse link 2 198,755,261 198,758,028 RGD:1624291
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:1624291
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:1600115
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP JBrowse link 1 220,762,496 220,771,158 RGD:1624291
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 14 84,393,182 84,413,931 RGD:1624291
RGD:13792537
G Sf3a2 splicing factor 3a, subunit 2 JBrowse link 7 11,777,826 11,784,373 RGD:1624291
RGD:13792537
G Sf3a3 splicing factor 3a, subunit 3 JBrowse link 5 142,702,721 142,722,350 RGD:1624291
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:1624291
RGD:13792537
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 1 220,645,685 220,665,611 RGD:1624291
RGD:13792537
G Sf3b3 splicing factor 3b, subunit 3 JBrowse link 19 43,392,071 43,429,582 RGD:1624291
G Slu7 SLU7 homolog, splicing factor JBrowse link 10 29,029,556 29,044,919 RGD:1624291
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:1600115
RGD:1624291
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 JBrowse link 5 148,577,498 148,610,658 RGD:1624291
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 1 126,961,389 126,974,453 RGD:1624291
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:1624291
RGD:13792537
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link 3 137,138,082 137,147,575 RGD:1624291
RGD:13792537
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:1624291
RGD:13792537
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:1624291
RGD:13792537
G Snrpd2l small nuclear ribonucleoprotein D2-like JBrowse link 20 28,872,902 28,873,434 RGD:13792537
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:1624291
RGD:13792537
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:1624291
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:1624291
RGD:13792537
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:1624291
RGD:13792537
G Snrpn small nuclear ribonucleoprotein polypeptide N JBrowse link 1 195,074,328 195,096,460 RGD:13792537
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Srrm1 serine and arginine repetitive matrix 1 JBrowse link 5 153,675,619 153,708,187 RGD:1624291
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 10 13,128,820 13,162,956 RGD:1624291
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:1624291
G Syf2 SYF2 pre-mRNA-splicing factor JBrowse link 5 153,269,638 153,277,562 RGD:1624291
RGD:13792537
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein JBrowse link 8 96,100,692 96,266,342 RGD:1600115
RGD:1624291
G Tfip11 tuftelin interacting protein 11 JBrowse link 12 50,320,820 50,333,052 RGD:1624291
G U2af1 U2 small nuclear RNA auxiliary factor 1 JBrowse link 20 10,396,652 10,407,564 RGD:1624291
G Wdr83 WD repeat domain 83 JBrowse link 19 26,188,644 26,194,193 RGD:1600115
RGD:1624291
G Xab2 XPA binding protein 2 JBrowse link 12 2,158,391 2,170,397 RGD:1624291
RGD:13792537
G Zcchc8 zinc finger CCHC-type containing 8 JBrowse link 12 38,303,665 38,327,174 RGD:1624291
commitment complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf39 pre-mRNA processing factor 39 JBrowse link 6 86,785,793 86,810,806 RGD:13792537
G Snrpc small nuclear ribonucleoprotein polypeptide C JBrowse link 20 7,409,401 7,427,581 RGD:1600115
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:13792537
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:13792537
G U2af2 U2 small nuclear RNA auxiliary factor 2 JBrowse link 1 72,312,260 72,329,828 RGD:13792537
post-mRNA release spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc12 coiled-coil domain containing 12 JBrowse link 8 118,925,682 118,977,038 RGD:13792537
G Ccdc130 coiled-coil domain containing 130 JBrowse link 19 25,367,552 25,378,993 RGD:13792537
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 6 18,349,226 18,351,540 RGD:13792537
G Cwf19l1 CWF19 like cell cycle control factor 1 JBrowse link 1 263,887,014 263,910,251 RGD:13792537
G Cwf19l2 CWF19 like cell cycle control factor 2 JBrowse link 6 18,970,616 19,037,176 RGD:13792537
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:13792537
G Isy1 ISY1 splicing factor homolog JBrowse link 4 119,721,659 119,742,349 RGD:13792537
G LOC102548514 crooked neck-like protein 1-like JBrowse link 3 140,125,232 140,141,730 RGD:13792537
G Myef2 myelin expression factor 2 JBrowse link 3 117,353,490 117,389,582 RGD:13792537
G Syf2 SYF2 pre-mRNA-splicing factor JBrowse link 5 153,269,638 153,277,562 RGD:13792537
G Xab2 XPA binding protein 2 JBrowse link 12 2,158,391 2,170,397 RGD:13792537
post-spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isy1 ISY1 splicing factor homolog JBrowse link 4 119,721,659 119,742,349 RGD:13792537
precatalytic spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07042226.1 RGD:13792537
G AC126899.1 RGD:13792537
G LOC100359574 NHP2 non-histone chromosome protein 2-like 1-like JBrowse link 1 281,863,115 281,864,546 RGD:13792537
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G JBrowse link 1 91,588,215 91,588,629 RGD:13792537
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 20 4,966,817 4,970,567 RGD:13792537
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 4 123,162,086 123,168,330 RGD:13792537
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated JBrowse link 4 45,555,077 45,560,943 RGD:13792537
G Phf5a PHD finger protein 5A JBrowse link 7 123,095,286 123,101,851 RGD:13792537
G Prpf31 pre-mRNA processing factor 31 JBrowse link 1 64,150,786 64,162,461 RGD:13792537
G Prpf38a pre-mRNA processing factor 38A JBrowse link 5 128,174,835 128,186,532 RGD:1624291
RGD:13792537
G Prpf38b pre-mRNA processing factor 38B JBrowse link 2 211,706,245 211,715,271 RGD:13792537
G Rbmx2 RNA binding motif protein, X-linked 2 JBrowse link X 135,550,931 135,558,440 RGD:13792537
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 1 220,645,685 220,665,611 RGD:13792537
G Sf3b5 splicing factor 3b, subunit 5 JBrowse link 1 7,101,715 7,102,427 RGD:13792537
G Smu1 SMU1, DNA replication regulator and spliceosomal factor JBrowse link 5 57,042,301 57,061,379 RGD:13792537
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:13792537
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:13792537
G Snrpd2l small nuclear ribonucleoprotein D2-like JBrowse link 20 28,872,902 28,873,434 RGD:13792537
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:13792537
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:13792537
G Snu13 small nuclear ribonucleoprotein 13 JBrowse link 7 123,282,754 123,287,721 RGD:13792537
G Wbp4 WW domain binding protein 4 JBrowse link 15 61,745,989 61,772,516 RGD:13792537
supraspliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:1624291
RGD:1600115
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:1624291
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:2316827
G Upf1 UPF1, RNA helicase and ATPase JBrowse link 16 20,824,888 20,845,632 RGD:1624291
U12-type spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07042226.1 RGD:13792537
G Dhx15 DEAH-box helicase 15 JBrowse link 14 61,136,740 61,174,880 RGD:1624291
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G JBrowse link 1 91,588,215 91,588,629 RGD:13792537
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 7 11,724,932 11,732,020 RGD:13792537
G Pdcd7 programmed cell death 7 JBrowse link 8 70,860,671 70,875,471 RGD:1624291
G Phf5a PHD finger protein 5A JBrowse link 7 123,095,286 123,101,851 RGD:1624291
RGD:13792537
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 JBrowse link 2 216,481,457 216,510,051 RGD:1624291
RGD:13792537
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:1624291
RGD:13792537
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 1 220,645,685 220,665,611 RGD:1624291
RGD:13792537
G Sf3b3 splicing factor 3b, subunit 3 JBrowse link 19 43,392,071 43,429,582 RGD:1624291
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 2 198,312,428 198,317,180 RGD:1624291
RGD:13792537
G Sf3b5 splicing factor 3b, subunit 5 JBrowse link 1 7,101,715 7,102,427 RGD:1624291
G Sf3b6 splicing factor 3B, subunit 6 JBrowse link 6 29,991,232 29,999,668 RGD:1624291
G Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 JBrowse link 10 15,685,999 15,689,338 RGD:1624291
RGD:13792537
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link 12 37,531,082 37,538,823 RGD:1624291
RGD:13792537
RGD:1600115
G Snrnp48 small nuclear ribonucleoprotein U11/U12 subunit 48 JBrowse link 17 27,243,732 27,279,271 RGD:1624291
RGD:13792537
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:1624291
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:1624291
RGD:13792537
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:1624291
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:1624291
RGD:13792537
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:1624291
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:1624291
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:1624291
RGD:13792537
G Ybx1 Y box binding protein 1 JBrowse link 5 138,319,754 138,336,721 RGD:1624291
RGD:1600115
G Zcrb1 zinc finger CCHC-type and RNA binding motif containing 1 JBrowse link 7 134,588,902 134,602,239 RGD:1624291
RGD:13792537
G Zmat5 zinc finger, matrin type 5 JBrowse link 14 84,937,843 84,968,898 RGD:1624291
RGD:13792537
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 JBrowse link 14 107,750,162 107,751,895 RGD:1624291
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 JBrowse link X 32,304,707 32,327,419 RGD:1624291
U2-type catalytic step 1 spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casc3 CASC3 exon junction complex subunit JBrowse link 10 86,724,534 86,744,485 RGD:1600115
RGD:1624291
G Cwc22 CWC22 spliceosome associated protein homolog JBrowse link 3 64,731,145 64,780,127 RGD:1624291
G Cwc25 CWC25 spliceosome-associated protein homolog JBrowse link 10 85,684,898 85,709,568 RGD:1624291
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:1600115
RGD:1624291
G Isy1 ISY1 splicing factor homolog JBrowse link 4 119,721,659 119,742,349 RGD:1600115
RGD:1624291
G Magohb mago homolog B, exon junction complex subunit JBrowse link 4 165,514,584 165,522,366 RGD:1624291
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:13792537
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:1624291
G Rbm22 RNA binding motif protein 22 JBrowse link 18 55,828,158 55,839,421 RGD:13792537
G Rbm8a RNA binding motif protein 8A JBrowse link 2 198,755,261 198,758,028 RGD:1600115
RGD:1624291
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:1600115
RGD:1624291
G Yju2 YJU2 splicing factor homolog JBrowse link 9 11,098,914 11,108,806 RGD:1624291
RGD:13792537
U2-type catalytic step 2 spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqr aquarius intron-binding spliceosomal factor JBrowse link 3 105,570,399 105,640,431 RGD:1624291
G Bcas2 BCAS2, pre-mRNA processing factor JBrowse link 2 205,662,633 205,670,514 RGD:1624291
G Bud31 BUD31 homolog JBrowse link 12 11,232,963 11,240,449 RGD:1624291
G Cdc40 cell division cycle 40 JBrowse link 20 48,503,973 48,574,546 RGD:1624291
G Cdc5l cell division cycle 5-like JBrowse link 9 17,949,764 17,988,514 RGD:1624291
RGD:1600115
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 6 18,349,226 18,351,540 RGD:1600115
RGD:13792537
RGD:1624291
G Cwc15 CWC15 spliceosome-associated protein JBrowse link 8 12,994,131 13,004,958 RGD:1624291
RGD:1600115
G Cwc22 CWC22 spliceosome associated protein homolog JBrowse link 3 64,731,145 64,780,127 RGD:1624291
G Dhx8 DEAH-box helicase 8 JBrowse link 10 89,645,979 89,683,839 RGD:1624291
G Eftud2 elongation factor Tu GTP binding domain containing 2 JBrowse link 10 90,932,071 90,983,971 RGD:1624291
RGD:13792537
G LOC102548514 crooked neck-like protein 1-like JBrowse link 3 140,125,232 140,141,730 RGD:1600115
RGD:13792537
G Plrg1 pleiotropic regulator 1 JBrowse link 2 182,040,338 182,056,669 RGD:1624291
RGD:1600115
G Ppie peptidylprolyl isomerase E JBrowse link 5 140,822,141 140,835,244 RGD:1624291
G Ppil1 peptidylprolyl isomerase like 1 JBrowse link 20 6,515,638 6,864,571 RGD:1624291
G Prpf19 pre-mRNA processing factor 19 JBrowse link 1 226,947,065 226,958,147 RGD:1624291
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:1624291
G Rbm22 RNA binding motif protein 22 JBrowse link 18 55,828,158 55,839,421 RGD:1624291
RGD:13792537
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 JBrowse link 5 148,577,498 148,610,658 RGD:1624291
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 1 126,961,389 126,974,453 RGD:1624291
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:1624291
RGD:1600115
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link 3 137,138,082 137,147,575 RGD:1624291
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:1624291
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:1624291
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:1624291
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:1624291
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:1624291
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:1624291
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 10 13,128,820 13,162,956 RGD:1624291
G Syf2 SYF2 pre-mRNA-splicing factor JBrowse link 5 153,269,638 153,277,562 RGD:1624291
RGD:1600115
G Xab2 XPA binding protein 2 JBrowse link 12 2,158,391 2,170,397 RGD:1600115
RGD:13792537
RGD:1624291
U2-type post-mRNA release spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx15 DEAH-box helicase 15 JBrowse link 14 61,136,740 61,174,880 RGD:1624291
G Gcfc2 GC-rich sequence DNA-binding factor 2 JBrowse link 4 112,662,556 112,700,505 RGD:1624291
G Tfip11 tuftelin interacting protein 11 JBrowse link 12 50,320,820 50,333,052 RGD:1624291
RGD:13792537
RGD:1600115
U2-type post-spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf18 pre-mRNA processing factor 18 JBrowse link 17 77,601,914 77,632,507 RGD:13792537
U2-type precatalytic spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bud13 BUD13 homolog JBrowse link 8 50,573,026 50,588,860 RGD:1600115
RGD:1624291
G Cwc22 CWC22 spliceosome associated protein homolog JBrowse link 3 64,731,145 64,780,127 RGD:1624291
G Cwc27 CWC27 spliceosome associated cyclophilin JBrowse link 2 34,716,420 34,923,060 RGD:1600115
RGD:1624291
G Dhx16 DEAH-box helicase 16 JBrowse link 20 3,368,971 3,386,087 RGD:1624291
G Eftud2 elongation factor Tu GTP binding domain containing 2 JBrowse link 10 90,932,071 90,983,971 RGD:1624291
G Ik IK cytokine JBrowse link 18 29,587,901 29,602,705 RGD:1600115
RGD:1624291
G LOC100359574 NHP2 non-histone chromosome protein 2-like 1-like JBrowse link 1 281,863,115 281,864,546 RGD:1600115
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 20 4,966,817 4,970,567 RGD:1624291
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 4 123,162,086 123,168,330 RGD:1624291
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 16 20,506,399 20,511,818 RGD:1624291
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 4 87,016,003 87,019,219 RGD:1624291
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 19 32,770,640 32,785,215 RGD:1624291
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 7 11,724,932 11,732,020 RGD:1624291
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated JBrowse link 4 45,555,077 45,560,943 RGD:1624291
G Magohb mago homolog B, exon junction complex subunit JBrowse link 4 165,514,584 165,522,366 RGD:1624291
G Mfap1a microfibrillar-associated protein 1A JBrowse link 3 113,428,855 113,445,435 RGD:1624291
G NEWGENE_1359268 Smad nuclear interacting protein 1 JBrowse link 5 143,063,206 143,070,899 RGD:1600115
G Phf5a PHD finger protein 5A JBrowse link 7 123,095,286 123,101,851 RGD:1624291
G Prpf3 pre-mRNA processing factor 3 JBrowse link 2 197,947,010 197,971,464 RGD:1624291
G Prpf31 pre-mRNA processing factor 31 JBrowse link 1 64,150,786 64,162,461 RGD:1624291
G Prpf38a pre-mRNA processing factor 38A JBrowse link 5 128,174,835 128,186,532 RGD:1624291
G Prpf4 pre-mRNA processing factor 4 JBrowse link 5 78,267,248 78,281,172 RGD:1624291
G Prpf6 pre-mRNA processing factor 6 JBrowse link 3 177,098,137 177,162,937 RGD:1624291
RGD:1600115
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:1624291
G Rbmx2 RNA binding motif protein, X-linked 2 JBrowse link X 135,550,931 135,558,440 RGD:1600115
RGD:1624291
G Rnf113a1 ring finger protein 113A1 JBrowse link X 123,806,922 123,808,049 RGD:1624291
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP JBrowse link 1 220,762,496 220,771,158 RGD:1624291
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 14 84,393,182 84,413,931 RGD:1624291
G Sf3a2 splicing factor 3a, subunit 2 JBrowse link 7 11,777,826 11,784,373 RGD:1624291
RGD:1600115
G Sf3a3 splicing factor 3a, subunit 3 JBrowse link 5 142,702,721 142,722,350 RGD:1624291
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:1624291
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 1 220,645,685 220,665,611 RGD:1624291
G Sf3b3 splicing factor 3b, subunit 3 JBrowse link 19 43,392,071 43,429,582 RGD:1624291
G Sf3b4 splicing factor 3b, subunit 4 JBrowse link 2 198,312,428 198,317,180 RGD:1624291
G Sf3b5 splicing factor 3b, subunit 5 JBrowse link 1 7,101,715 7,102,427 RGD:1624291
G Smu1 SMU1, DNA replication regulator and spliceosomal factor JBrowse link 5 57,042,301 57,061,379 RGD:1600115
RGD:1624291
G Snip1 Smad nuclear interacting protein 1 JBrowse link 15 19,275,273 19,282,753 RGD:1600115
RGD:1624291
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:1600115
RGD:1624291
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 1 126,961,389 126,974,453 RGD:1624291
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:1624291
RGD:1600115
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link 3 137,138,082 137,147,575 RGD:1624291
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:1624291
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:1624291
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:1624291
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:1624291
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:1624291
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:1624291
G Snu13 small nuclear ribonucleoprotein 13 JBrowse link 7 123,282,754 123,287,721 RGD:1600115
RGD:1624291
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 10 13,128,820 13,162,956 RGD:1624291
G Txnl4a thioredoxin-like 4A JBrowse link 18 76,725,221 76,740,673 RGD:1624291
G Wbp4 WW domain binding protein 4 JBrowse link 15 61,745,989 61,772,516 RGD:1600115
RGD:1624291
G Zmat2 zinc finger, matrin type 2 JBrowse link 18 29,639,991 29,644,626 RGD:1624291
U2-type prespliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07042226.1 RGD:13792537
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G JBrowse link 1 91,588,215 91,588,629 RGD:13792537
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated JBrowse link 7 11,724,932 11,732,020 RGD:13792537
G Luc7l LUC7-like JBrowse link 10 15,538,878 15,572,651 RGD:13792537
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor JBrowse link 4 66,290,319 66,357,970 RGD:13792537
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor JBrowse link 10 81,991,147 82,027,119 RGD:13792537
G Prpf39 pre-mRNA processing factor 39 JBrowse link 6 86,785,793 86,810,806 RGD:13792537
G Prpf40a pre-mRNA processing factor 40 homolog A JBrowse link 3 38,680,583 38,741,570 RGD:13792537
G Prpf40b pre-mRNA processing factor 40 homolog B JBrowse link 7 140,958,952 140,981,588 RGD:13792537
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 14 84,393,182 84,413,931 RGD:13792537
RGD:1624291
G Sf3a2 splicing factor 3a, subunit 2 JBrowse link 7 11,777,826 11,784,373 RGD:13792537
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:13792537
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link 1 101,367,470 101,388,153 RGD:13792537
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:13792537
G Snrpc small nuclear ribonucleoprotein polypeptide C JBrowse link 20 7,409,401 7,427,581 RGD:1600115
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:13792537
G Snrpn small nuclear ribonucleoprotein polypeptide N JBrowse link 1 195,074,328 195,096,460 RGD:13792537
G U2af2 U2 small nuclear RNA auxiliary factor 2 JBrowse link 1 72,312,260 72,329,828 RGD:1624291
RGD:13792537
U2-type spliceosomal complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bud13 BUD13 homolog JBrowse link 8 50,573,026 50,588,860 RGD:13792537
G Ccdc12 coiled-coil domain containing 12 JBrowse link 8 118,925,682 118,977,038 RGD:13792537
G Ccdc130 coiled-coil domain containing 130 JBrowse link 19 25,367,552 25,378,993 RGD:13792537
G Htatsf1 HIV-1 Tat specific factor 1 JBrowse link X 159,514,053 159,528,281 RGD:13792537
G LOC108348079 RING finger protein 113A-like JBrowse link X 124,516,931 124,518,080 RGD:13792537
G Rnf113a1 ring finger protein 113A1 JBrowse link X 123,806,922 123,808,049 RGD:13792537
G Sf3a1 splicing factor 3a, subunit 1 JBrowse link 14 84,393,182 84,413,931 RGD:1624291
G Sf3b2 splicing factor 3b, subunit 2 JBrowse link 1 220,645,685 220,665,611 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19951
    protein-containing complex 5828
      ribonucleoprotein complex 1100
        spliceosomal complex 192
          U12-type spliceosomal complex + 28
          U2-type spliceosomal complex + 96
          catalytic step 1 spliceosome + 12
          catalytic step 2 spliceosome + 92
          post-mRNA release spliceosomal complex + 14
          post-spliceosomal complex + 2
          precatalytic spliceosome + 57
          prespliceosome + 18
          supraspliceosomal complex 4
          trans spliceosomal complex 0
Path 2
Term Annotations click to browse term
  cellular_component 19951
    cellular anatomical entity 19598
      organelle 12670
        membrane-bounded organelle 10978
          intracellular membrane-bounded organelle 10066
            nucleus 6843
              spliceosomal complex 192
                U12-type spliceosomal complex + 28
                U2-type spliceosomal complex + 96
                catalytic step 1 spliceosome + 12
                catalytic step 2 spliceosome + 92
                post-mRNA release spliceosomal complex + 14
                post-spliceosomal complex + 2
                precatalytic spliceosome + 57
                prespliceosome + 18
                supraspliceosomal complex 4
                trans spliceosomal complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.