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ONTOLOGY REPORT - ANNOTATIONS


Term:U5 snRNP
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Accession:GO:0005682 term browser browse the term
Definition:A ribonucleoprotein complex that contains small nuclear RNA U5.


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U5 snRNP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07042226.1 RGD:13792537
G AC096024.2 RGD:1600115
G Cd2bp2 Cd2 (cytoplasmic tail) binding protein 2 JBrowse link 1 198,635,445 198,641,195 RGD:1624291
RGD:13792537
G Ddx23 DEAD-box helicase 23 JBrowse link 7 140,325,453 140,342,730 RGD:1624291
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G JBrowse link 1 91,588,215 91,588,629 RGD:13792537
G Prpf18 pre-mRNA processing factor 18 JBrowse link 17 77,601,914 77,632,507 RGD:13792537
G Prpf6 pre-mRNA processing factor 6 JBrowse link 3 177,098,137 177,162,937 RGD:1624291
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:13792537
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:1624291
RGD:1600115
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:13792537
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:13792537
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:13792537
G Snrpd2l small nuclear ribonucleoprotein D2-like JBrowse link 20 28,872,902 28,873,434 RGD:13792537
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:13792537
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:1600115
G Snrpep2 small nuclear ribonucleoprotein polypeptide E pseudogene 2 JBrowse link 1 141,503,818 141,504,126 RGD:1600115
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:13792537
G Snrpn small nuclear ribonucleoprotein polypeptide N JBrowse link 1 195,074,328 195,096,460 RGD:13792537
G Txnl4a thioredoxin-like 4A JBrowse link 18 76,725,221 76,740,673 RGD:1600115
G Txnl4b thioredoxin-like 4B JBrowse link 19 42,101,081 42,110,223 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19809
    protein-containing complex 5770
      Sm-like protein family complex 78
        small nuclear ribonucleoprotein complex 66
          spliceosomal snRNP complex 62
            U5 snRNP 20
Path 2
Term Annotations click to browse term
  cellular_component 19809
    cellular anatomical entity 19424
      organelle 12542
        membrane-bounded organelle 10872
          intracellular membrane-bounded organelle 9969
            nucleus 6778
              small nuclear ribonucleoprotein complex 66
                spliceosomal snRNP complex 62
                  U5 snRNP 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.