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Term:U2 snRNP
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Accession:GO:0005686 term browser browse the term
Definition:A ribonucleoprotein complex that contains small nuclear RNA U2.
Comment:U2 snRNP refers to the U2 small nuclear RNA and the proteins that associate with it. U2 snRNP is not considered to be a type of spliceosomal complex by itself.
Synonyms:narrow_synonym: 17S U2 snRNP

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U2 snRNP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htatsf1 HIV-1 Tat specific factor 1 JBrowse link NW_004955489 8,607,649 8,622,044 RGD:9068941
G Phf5a PHD finger protein 5A JBrowse link NW_004955413 27,018,730 27,026,937 RGD:9068941
G Rbmx2 RNA binding motif protein X-linked 2 JBrowse link NW_004955473 4,654,257 4,664,419 RGD:9068941
G Sf3a1 splicing factor 3a subunit 1 JBrowse link NW_004955455 4,579,153 4,601,942 RGD:9068941
G Sf3a2 splicing factor 3a subunit 2 JBrowse link NW_004955495 5,896,648 5,904,287 RGD:9068941
G Sf3a3 splicing factor 3a subunit 3 JBrowse link NW_004955452 15,691,729 15,715,782 RGD:9068941
G Sf3b1 splicing factor 3b subunit 1 JBrowse link NW_004955403 3,134,960 3,163,395 RGD:9068941
G Sf3b2 splicing factor 3b subunit 2 JBrowse link NW_004955422 19,242,041 19,266,479 RGD:9068941
G Sf3b5 splicing factor 3b subunit 5 JBrowse link NW_004955436 16,380,412 16,381,373 RGD:9068941
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link NW_004955416 28,166,885 28,178,404 RGD:9068941
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link NW_004955415 13,522,638 13,530,725 RGD:9068941
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link NW_004955415 25,880,013 25,889,295 RGD:9068941
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link NW_004955402 10,283,970 10,294,869 RGD:9068941
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link NW_004955574 157,769 164,947 RGD:9068941
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link NW_004955455 8,021,946 8,045,325 RGD:9068941
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link NW_004955406 39,725,841 39,732,527 RGD:9068941
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link NW_004955424 14,844,318 14,851,720 RGD:9068941
G Snrpn small nuclear ribonucleoprotein polypeptide N JBrowse link NW_004955416 31,668,789 31,674,144 RGD:9068941
G Snurf SNRPN upstream reading frame JBrowse link NW_004955416 31,655,664 31,668,803 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15283
    protein-containing complex 4766
      Sm-like protein family complex 69
        small nuclear ribonucleoprotein complex 61
          spliceosomal snRNP complex 55
            U2 snRNP 19
Path 2
Term Annotations click to browse term
  cellular_component 15283
    cellular anatomical entity 15156
      organelle 11927
        membrane-bounded organelle 10969
          intracellular membrane-bounded organelle 9516
            nucleus 6481
              small nuclear ribonucleoprotein complex 61
                spliceosomal snRNP complex 55
                  U2 snRNP 19
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.