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Term:U2 snRNP
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Accession:GO:0005686 term browser browse the term
Definition:A ribonucleoprotein complex that contains small nuclear RNA U2.
Comment:U2 snRNP refers to the U2 small nuclear RNA and the proteins that associate with it. U2 snRNP is not considered to be a type of spliceosomal complex by itself.
Synonyms:narrow_synonym: 17S U2 snRNP

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U2 snRNP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HTATSF1 HIV-1 Tat specific factor 1 JBrowse link X 106,848,455 106,866,540 RGD:13508589
G LOC100686524 U2 small nuclear ribonucleoprotein B''-like JBrowse link 34 35,173,550 35,174,340 RGD:13508589
G LOC102152884 small nuclear ribonucleoprotein Sm D3 pseudogene JBrowse link X 60,094,850 60,095,507 RGD:13508589
G PHF5A PHD finger protein 5A JBrowse link 10 23,798,854 23,809,024 RGD:13508589
G SF3A1 splicing factor 3a subunit 1 JBrowse link 26 23,485,551 23,504,242 RGD:13508589
G SF3A2 splicing factor 3a subunit 2 JBrowse link 20 56,789,450 56,796,004 RGD:13508589
G SF3A3 splicing factor 3a subunit 3 JBrowse link 15 4,595,812 4,620,565 RGD:13508589
G SF3B1 splicing factor 3b subunit 1 JBrowse link 37 6,922,150 6,962,474 RGD:13508589
G SF3B2 splicing factor 3b subunit 2 JBrowse link 18 51,197,924 51,212,397 RGD:13508589
G SF3B5 splicing factor 3b subunit 5 JBrowse link 1 35,558,249 35,558,998 RGD:13508589
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' JBrowse link 3 39,777,947 39,791,256 RGD:13508589
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 24 18,673,975 18,683,315 RGD:13508589
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link 24 6,106,217 6,117,369 RGD:13508589
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 7 66,407,313 66,421,193 RGD:13508589
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 109,891,253 109,896,712 RGD:13508589
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 26 28,247,878 28,263,519 RGD:13508589
G SNRPE small nuclear ribonucleoprotein polypeptide E JBrowse link 38 515,808 521,536 RGD:13508589
G SNRPG small nuclear ribonucleoprotein polypeptide G JBrowse link 10 68,826,250 68,836,755 RGD:13508589
G SNRPN small nuclear ribonucleoprotein polypeptide N JBrowse link 3 35,837,582 35,842,925 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 14547
    protein-containing complex 4078
      Sm-like protein family complex 69
        small nuclear ribonucleoprotein complex 58
          spliceosomal snRNP complex 55
            U2 snRNP 19
Path 2
Term Annotations click to browse term
  cellular_component 14547
    cellular anatomical entity 14400
      organelle 9046
        membrane-bounded organelle 7853
          intracellular membrane-bounded organelle 7195
            nucleus 4936
              small nuclear ribonucleoprotein complex 58
                spliceosomal snRNP complex 55
                  U2 snRNP 19
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.