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ONTOLOGY REPORT - ANNOTATIONS


Term:U4 snRNP
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Accession:GO:0005687 term browser browse the term
Definition:A ribonucleoprotein complex that contains small nuclear RNA U4.


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U4 snRNP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07042226.1 RGD:13792537
G AC096024.2 RGD:1600115
G Ddx39b DExD-box helicase 39B JBrowse link 20 4,806,103 4,818,600 RGD:1624291
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G JBrowse link 1 91,588,215 91,588,629 RGD:13792537
G Prpf31 pre-mRNA processing factor 31 JBrowse link 1 64,150,786 64,162,461 RGD:1624291
RGD:13792537
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 JBrowse link 3 122,696,125 122,703,734 RGD:1624291
RGD:13792537
RGD:1600115
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:1624291
RGD:13792537
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:1624291
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:1624291
RGD:13792537
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:1624291
G Snrpep2 small nuclear ribonucleoprotein polypeptide E pseudogene 2 JBrowse link 1 141,503,818 141,504,126 RGD:1600115
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:1624291
G Snrpg small nuclear ribonucleoprotein polypeptide G JBrowse link 4 118,167,267 118,174,846 RGD:1624291
RGD:13792537
G Snrpn small nuclear ribonucleoprotein polypeptide N JBrowse link 1 195,074,328 195,096,460 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19843
    protein-containing complex 5779
      Sm-like protein family complex 78
        small nuclear ribonucleoprotein complex 66
          spliceosomal snRNP complex 62
            U4 snRNP 14
Path 2
Term Annotations click to browse term
  cellular_component 19843
    cellular anatomical entity 19457
      organelle 12557
        membrane-bounded organelle 10879
          intracellular membrane-bounded organelle 9976
            nucleus 6783
              small nuclear ribonucleoprotein complex 66
                spliceosomal snRNP complex 62
                  U4 snRNP 14
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.