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ONTOLOGY REPORT - ANNOTATIONS


Term:perichromatin fibrils
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Accession:GO:0005726 term browser browse the term
Definition:Structures of variable diameter visible in the nucleoplasm by electron microscopy, mainly observed near the border of condensed chromatin. The fibrils are enriched in RNA, and are believed to be sites of pre-mRNA splicing and polyadenylylation representing the in situ form of nascent transcripts.


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perichromatin fibrils term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:10401943
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 7 60,385,688 60,417,661 RGD:1624291
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
G Nufip1 nuclear FMR1 interacting protein 1 JBrowse link 15 58,171,163 58,201,888 RGD:1624291
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:5687141
G Trim24 tripartite motif-containing 24 JBrowse link 4 65,632,278 65,684,746 RGD:1624291

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  cellular_component 19843
    cellular anatomical entity 19457
      perichromatin fibrils 7
Path 2
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  cellular_component 19843
    cellular anatomical entity 19457
      organelle 12557
        membrane-bounded organelle 10879
          intracellular membrane-bounded organelle 9976
            nucleus 6783
              nuclear lumen 3992
                nuclear chromosome 656
                  nuclear chromatin 445
                    perichromatin fibrils 7
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.