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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasm
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Accession:GO:0005737 term browser browse the term
Definition:All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Synonyms:xref: MIPS_funcat:70.03;   Wikipedia:Cytoplasm


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  cellular_component 18749
    cellular anatomical entity 18561
      cytoplasm 11444
        ADPG pyrophosphorylase complex + 0
        APC-IQGAP complex 0
        APC-IQGAP1-CLIP-170 complex 0
        APC-IQGAP1-Cdc42 complex 0
        APC-IQGAP1-Rac1 complex 0
        APC-tubulin-IQGAP1 complex 0
        Atg1/ULK1 kinase complex 8
        Atg12-Atg5-Atg16 complex 3
        CBM complex 4
        CRD-mediated mRNA stability complex 6
        CSK-GAP-A.p62 complex 0
        CUGBP1-eIF2 complex 0
        Cdc42 GTPase complex 0
        Cvt complex 0
        DNA gyrase complex 0
        DNA topoisomerase IV complex 0
        FHF complex 5
        G-protein beta/gamma-Btk complex 0
        G-protein beta/gamma-Raf-1 complex 0
        G-protein beta/gamma-subunit complex 13
        Golgi apparatus + 1591
        HSP90-CDC37 chaperone complex 2
        Myo2p-Vac17p-Vac8p transport complex 0
        N-terminal protein acetyltransferase complex + 10
        PAN complex 2
        PHA granule 0
        Par3-APC-KIF3A complex 0
        RAVE complex 3
        Rab-protein geranylgeranyltransferase complex 4
        RasGAP-Fyn-Lyn-Yes complex 0
        SCAR complex 9
        SMN-Sm protein complex + 18
        SNARE complex + 48
        Scrib-APC complex 0
        Scrib-APC-beta-catenin complex 2
        Sid2-Mob1 complex 0
        Ski complex 3
        UFD1-NPL4 complex 2
        VCP-NSFL1C complex 2
        WASH complex 15
        acetolactate synthase complex 0
        acetyl-CoA carboxylase complex + 1
        acidocalcisome + 0
        alkyl hydroperoxide reductase complex 0
        alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) 0
        anaerobic ribonucleoside-triphosphate reductase complex 0
        anammoxosome 0
        anthranilate synthase complex 0
        apical cytoplasm + 2
        basolateral cytoplasm + 0
        beta-catenin destruction complex 12
        calpain complex 0
        carbamoyl-phosphate synthase complex 0
        cell cortex + 315
        cell plate 0
        citrate lyase complex 0
        contractile fiber + 240
        crystalloid 0
        cysteine synthase complex 0
        cytoplasmic U snRNP body 0
        cytoplasmic chromosome + 2
        cytoplasmic cyclin-dependent protein kinase holoenzyme complex 2
        cytoplasmic exosome (RNase complex) + 14
        cytoplasmic microtubule + 71
        cytoplasmic microtubule bundle 1
        cytoplasmic region + 248
        cytoplasmic ribonucleoprotein granule + 220
        cytoplasmic transcription factor complex + 0
        cytoplasmic transcriptional repressor complex + 0
        cytoplasmic ubiquitin ligase complex + 17
        cytoplasmic vesicle + 2370
        cytosol + 5175
        dense body 6
        ectoplasm 1
        electron transfer flavoprotein complex + 0
        endoplasmic reticulum + 1431
        endoplasmic reticulum-Golgi intermediate compartment + 131
        eukaryotic translation elongation factor 1 complex 4
        eukaryotic translation initiation factor 2 complex 5
        eukaryotic translation initiation factor 2B complex 6
        eukaryotic translation initiation factor 3 complex + 16
        eukaryotic translation initiation factor 4F complex 13
        fusome 0
        glutamate-cysteine ligase complex 2
        glutamate-tRNA ligase complex 0
        glycerol-3-phosphate dehydrogenase complex 3
        glycine cleavage complex 2
        glycine reductase complex 0
        glycine-tRNA ligase complex 0
        glycogen granule 7
        glycolate oxidase complex 0
        goblet cell theca 0
        histone mRNA stem-loop binding complex 0
        homodimeric decaprenyl diphosphate synthase complex 0
        homomeric SMAD protein complex 0
        hydrogenosome + 0
        imidazoleglycerol-phosphate synthase complex 0
        keratohyalin granule 4
        membrane coat + 96
        methane-oxidizing organelle 0
        methionyl glutamyl tRNA synthetase complex 0
        methylosome 12
        microbody + 140
        mitochondrial cloud 0
        mitochondrion + 1604
        mitosome 0
        mitotic spindle assembly checkpoint MAD1-MAD2 complex 0
        monolayer-surrounded lipid storage body outer lipid monolayer 0
        multi-eIF complex 2
        nascent polypeptide-associated complex 5
        neurofilament 10
        ooplasm 1
        ornithine carbamoyltransferase complex 0
        pICln-Sm protein complex 6
        paraferritin complex 1
        perinuclear region of cytoplasm + 728
        periphagosomal region of cytoplasm 0
        phagophore 0
        phagophore assembly site + 32
        phenylalanine-tRNA ligase complex 2
        phosphoenolpyruvate-dependent sugar phosphotransferase complex 0
        phosphopantothenoylcysteine decarboxylase complex 0
        phosphoribosylaminoimidazole carboxylase complex 0
        phosphorylase kinase complex 5
        phragmoplast 0
        phragmosome 0
        pirellulosome 0
        plasma membrane-derived chromatophore + 0
        plasma membrane-derived photosystem I 0
        plasma membrane-derived thylakoid photosystem II 0
        plastid + 1
        pole plasm + 20
        polkadots 0
        polyketide synthase complex + 0
        preprophase band 0
        procentriole 0
        procentriole replication complex 0
        protein body 0
        protein farnesyltransferase complex 3
        protein phosphatase type 1 complex 10
        protein-N(PI)-phosphohistidine-sugar phosphotransferase complex 0
        pyruvate dehydrogenase (lipoamide) phosphatase complex + 0
        pyruvate dehydrogenase complex + 8
        ribulose bisphosphate carboxylase complex + 0
        sarcoplasm + 80
        sarcosine oxidase complex 0
        scintillon 0
        serine-pyruvate aminotransferase complex 1
        signal recognition particle + 9
        spectrosome 0
        subsynaptic reticulum 0
        sulfate adenylyltransferase complex (ATP) 0
        thioglucosidase complex 0
        translation initiation complex + 1
        translation initiation ternary complex 1
        translation preinitiation complex + 18
        translation release factor complex 3
        transnitrosylase complex + 0
        tricarboxylic acid cycle enzyme complex + 15
        type I site-specific deoxyribonuclease complex 0
        type II site-specific deoxyribonuclease complex 0
        type III site-specific deoxyribonuclease complex 0
        type IV site-specific deoxyribonuclease complex 0
        urease complex 0
        vacuolar transporter chaperone complex 0
        vacuole + 793
        viral assembly compartment 0
        viral assembly intermediate 0
        yolk + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.