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ONTOLOGY REPORT - ANNOTATIONS


Term:lysosome
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Accession:GO:0005764 term browser browse the term
Definition:A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
Synonyms:xref: MIPS_funcat:70.25;   NIF_Subcellular:sao585356902;   Wikipedia:Lysosome


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lysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1600115
RGD:1624291
G Abca5 ATP binding cassette subfamily A member 5 JBrowse link 10 98,573,226 98,645,028 RGD:1624291
RGD:1600115
G Abcb9 ATP binding cassette subfamily B member 9 JBrowse link 12 37,923,974 37,956,678 RGD:1624291
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1624291
RGD:1600115
G Acp2 acid phosphatase 2, lysosomal JBrowse link 3 80,020,346 80,030,365 RGD:1600623
RGD:1624291
RGD:1600115
G Acp5 acid phosphatase 5, tartrate resistant JBrowse link 8 23,142,733 23,149,067 RGD:1331372
RGD:1624291
RGD:1600115
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1624291
RGD:1600115
G Aga aspartylglucosaminidase JBrowse link 16 41,222,225 41,234,169 RGD:1598777
RGD:13792537
RGD:1624291
G Aldob aldolase, fructose-bisphosphate B JBrowse link 5 64,805,772 64,818,813 RGD:1599068
G Ank3 ankyrin 3 JBrowse link 20 19,948,767 20,480,628 RGD:1600115
G Ankrd27 ankyrin repeat domain 27 JBrowse link 1 91,857,048 91,958,763 RGD:1624291
RGD:1600115
G Ap5m1 adaptor related protein complex 5 subunit mu 1 JBrowse link 15 25,933,483 25,955,745 RGD:1624291
RGD:13792537
RGD:1600115
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 JBrowse link 3 123,754,035 123,757,349 RGD:1624291
RGD:13792537
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7495790
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Aqp2 aquaporin 2 JBrowse link 7 141,237,802 141,242,837 RGD:2313123
G Arrdc3 arrestin domain containing 3 JBrowse link 2 8,732,907 8,745,445 RGD:1600115
G Arsa arylsulfatase A JBrowse link 7 130,446,644 130,452,632 RGD:1599222
G Arsb arylsulfatase B JBrowse link 2 23,385,154 23,543,028 RGD:1599229
G Arsg arylsulfatase G JBrowse link 10 97,722,550 97,859,975 RGD:1624291
RGD:1600115
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:1624291
RGD:1600115
G Ass1 argininosuccinate synthase 1 JBrowse link 3 10,327,411 10,375,847 RGD:4142786
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:1624291
G Atp6ap2 ATPase H+ transporting accessory protein 2 JBrowse link X 11,137,889 11,164,854 RGD:1600115
RGD:1624291
G Atp6v0c ATPase H+ transporting V0 subunit C JBrowse link 10 13,537,031 13,543,407 RGD:631903
G Bace1 beta-secretase 1 JBrowse link 8 50,140,092 50,162,388 RGD:1600115
RGD:1624291
G Bbc3 Bcl-2 binding component 3 JBrowse link 1 78,261,491 78,267,802 RGD:1624291
G Bcl10 BCL10, immune signaling adaptor JBrowse link 2 251,805,392 251,814,957 RGD:1624291
RGD:1600115
G Calcrl calcitonin receptor like receptor JBrowse link 3 71,747,938 71,845,487 RGD:1624291
RGD:1600115
G Capn1 calpain 1 JBrowse link 1 221,346,081 221,370,965 RGD:1624291
RGD:1600115
G Capn2 calpain 2 JBrowse link 13 100,878,649 100,928,811 RGD:1624291
RGD:1600115
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:2292202
G Ccdc115 coiled-coil domain containing 115 JBrowse link 9 37,774,876 37,778,839 RGD:1624291
RGD:1600115
G Cckar cholecystokinin A receptor JBrowse link 14 59,610,939 59,619,786 RGD:2313345
G Cd164 CD164 molecule JBrowse link 20 46,250,418 46,261,994 RGD:70675
RGD:13792537
RGD:1624291
G Cd1d1 CD1d1 molecule JBrowse link 2 186,330,298 186,333,805 RGD:1624291
G Cd34 CD34 molecule JBrowse link 13 113,691,842 113,711,259 RGD:8553277
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:61549
RGD:1624291
G Cd68 Cd68 molecule JBrowse link 10 56,268,726 56,270,605 RGD:1624291
G Cd74 CD74 molecule JBrowse link 18 56,071,420 56,080,851 RGD:1624291
RGD:1600115
G Chid1 chitinase domain containing 1 JBrowse link 1 214,476,418 214,511,569 RGD:1624291
RGD:1600115
G Chmp2b charged multivesicular body protein 2B JBrowse link 11 2,666,405 2,692,213 RGD:1624291
RGD:1600115
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:1624291
RGD:13792537
G Cln5 CLN5, intracellular trafficking protein JBrowse link 15 93,634,815 93,644,146 RGD:1624291
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1624291
RGD:1600115
G Cpq carboxypeptidase Q JBrowse link 7 71,709,174 72,167,413 RGD:8554022
G Cst3 cystatin C JBrowse link 3 143,219,671 143,223,544 RGD:2306518
G Cst7 cystatin F JBrowse link 3 146,363,913 146,373,365 RGD:1600115
RGD:1624291
G Ctbs chitobiase JBrowse link 2 252,305,874 252,320,387 RGD:1600115
G Ctns cystinosin, lysosomal cystine transporter JBrowse link 10 59,749,250 59,772,475 RGD:1624291
G Ctrb1 chymotrypsinogen B1 JBrowse link 19 43,906,344 43,911,020 RGD:2303360
G Cts7 cathepsin 7 JBrowse link 17 3,280,311 3,285,451 RGD:13792537
G Cts8 cathepsin 8 JBrowse link 17 3,385,851 3,397,621 RGD:13792537
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:734525
RGD:1624291
RGD:13792537
RGD:1600115
RGD:2315504
RGD:1625498
RGD:1600623
G Ctsc cathepsin C JBrowse link 1 151,918,514 151,949,979 RGD:728225
RGD:13792537
RGD:8661625
RGD:1599644
G Ctsd cathepsin D JBrowse link 1 215,541,570 215,553,446 RGD:1299317
RGD:1624291
RGD:13792537
RGD:1625498
RGD:1600623
G Ctsf cathepsin F JBrowse link 1 220,114,228 220,119,976 RGD:13792537
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:5686400
RGD:13792537
RGD:1624291
RGD:1600115
G Ctsj cathepsin J JBrowse link 17 4,105,890 4,110,538 RGD:13792537
G Ctsk cathepsin K JBrowse link 2 196,655,469 196,666,447 RGD:1354673
RGD:1624291
RGD:13792537
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:631244
RGD:1624291
RGD:13792537
RGD:1625498
RGD:1600623
G Ctsll3 cathepsin L-like 3 JBrowse link 17 4,256,311 4,259,625 RGD:13792537
G Ctsm cathepsin M JBrowse link 17 3,820,606 3,826,015 RGD:13792537
G Ctsq cathepsin Q JBrowse link 17 3,991,330 3,996,889 RGD:632504
RGD:13792537
G Ctsql2 cathepsin Q-like 2 JBrowse link 17 4,062,294 4,068,108 RGD:13792537
G Ctsr cathepsin R JBrowse link 17 3,885,684 3,894,447 RGD:13792537
G Ctss cathepsin S JBrowse link 2 197,655,780 197,679,768 RGD:1624291
RGD:13792537
G Ctsw cathepsin W JBrowse link 1 220,844,579 220,847,967 RGD:13792537
G Ctsz cathepsin Z JBrowse link 3 172,527,107 172,537,877 RGD:1624291
RGD:13792537
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link 13 45,314,952 45,318,856 RGD:1624291
RGD:1600115
G Cyb561a3 cytochrome b561 family, member A3 JBrowse link 1 226,620,933 226,642,246 RGD:1624291
G Depdc5 DEP domain containing 5 JBrowse link 14 83,089,000 83,219,576 RGD:1624291
G Dnase2 deoxyribonuclease 2, lysosomal JBrowse link 19 26,022,855 26,025,523 RGD:1600115
G Dnase2b deoxyribonuclease 2 beta JBrowse link 2 252,436,363 252,475,506 RGD:1600115
G Doc2a double C2 domain alpha JBrowse link 1 198,282,828 198,288,611 RGD:8554104
G Dpp7 dipeptidylpeptidase 7 JBrowse link 3 2,569,135 2,573,387 RGD:1600115
G Dram1 DNA-damage regulated autophagy modulator 1 JBrowse link 7 28,898,647 28,932,641 RGD:1624291
RGD:13792537
G Dram2 DNA-damage regulated autophagy modulator 2 JBrowse link 2 209,160,901 209,189,641 RGD:1600115
RGD:13792537
RGD:1624291
G Dtx3l deltex E3 ubiquitin ligase 3L JBrowse link 11
11
67,758,093
67,768,542
67,767,623
67,772,428
RGD:1624291
RGD:1600115
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 JBrowse link 8 122,743,274 122,776,801 RGD:13207422
G Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 JBrowse link 19 740,007 762,897 RGD:13207422
G Epdr1 ependymin related 1 JBrowse link 17 47,397,558 47,422,183 RGD:1624291
G Epg5 ectopic P-granules autophagy protein 5 homolog JBrowse link 18 74,299,965 74,397,115 RGD:1624291
RGD:1600115
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:1624291
G Fnbp1 formin binding protein 1 JBrowse link 3 9,865,657 9,936,333 RGD:1600115
G Fuca1 alpha-L-fucosidase 1 JBrowse link 5 154,269,296 154,286,545 RGD:1625498
RGD:13792537
G Fuca2 alpha-L-fucosidase 2 JBrowse link 1 7,658,919 7,673,663 RGD:13792537
G Fyco1 FYVE and coiled-coil domain containing 1 JBrowse link 8 132,844,042 132,910,905 RGD:1624291
RGD:13792537
G Gaa glucosidase, alpha, acid JBrowse link 10 108,395,873 108,412,999 RGD:1599504
RGD:1600115
RGD:1624291
RGD:1625498
RGD:1599506
G Gabarap GABA type A receptor-associated protein JBrowse link 10 56,601,288 56,604,223 RGD:1624291
RGD:1600115
G Galc galactosylceramidase JBrowse link 6 122,177,195 122,239,411 RGD:13792537
G Galns galactosamine (N-acetyl)-6-sulfatase JBrowse link 19 55,391,004 55,423,328 RGD:1600115
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:12791270
RGD:1624291
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:1624291
G Ggh gamma-glutamyl hydrolase JBrowse link 5 34,040,258 34,063,369 RGD:69845
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:1582681
RGD:1624291
G Gla galactosidase, alpha JBrowse link X 105,405,915 105,417,331 RGD:1625498
RGD:1624291
G Glb1 galactosidase, beta 1 JBrowse link 8 122,439,328 122,511,939 RGD:1598982
RGD:1625498
G Glmp glycosylated lysosomal membrane protein JBrowse link 2 187,697,528 187,701,118 RGD:1624291
RGD:13792537
RGD:1600115
G Gm2a GM2 ganglioside activator JBrowse link 10 40,438,394 40,450,927 RGD:1598996
G Gns glucosamine (N-acetyl)-6-sulfatase JBrowse link 7 63,467,027 63,501,054 RGD:1600571
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:2289376
G Gpc3 glypican 3 JBrowse link X 139,579,268 139,947,093 RGD:1624291
RGD:1600115
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:1600115
RGD:1624291
G Gusb glucuronidase, beta JBrowse link 12 30,202,066 30,215,583 RGD:1625498
RGD:1600115
RGD:1624291
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:1600115
G Hck HCK proto-oncogene, Src family tyrosine kinase JBrowse link 3 148,579,917 148,623,026 RGD:1624291
RGD:1600115
G Hexa hexosaminidase subunit alpha JBrowse link 8 64,325,435 64,350,775 RGD:1624291
RGD:1600115
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:1599437
RGD:1624291
RGD:1625498
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate JBrowse link 10 109,638,944 109,657,460 RGD:1624291
RGD:1600115
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 JBrowse link 12 50,285,239 50,315,893 RGD:1624291
RGD:1600115
G Hpse heparanase JBrowse link 14 10,534,358 10,576,686 RGD:1600115
RGD:1624291
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059327
RGD:13792537
G Hyal1 hyaluronidase 1 JBrowse link 8 116,332,834 116,337,522 RGD:1600115
RGD:1624291
G Hyal2 hyaluronidase 2 JBrowse link 8 116,324,062 116,328,978 RGD:1600115
RGD:1624291
G Hyal3 hyaluronidase 3 JBrowse link 8 116,336,512 116,342,147 RGD:1600115
RGD:1624291
G Idua iduronidase, alpha-L- JBrowse link 14 2,041,828 2,056,762 RGD:1625498
G Ifi30 IFI30, lysosomal thiol reductase JBrowse link 16 20,426,566 20,430,772 RGD:1624291
RGD:1600115
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1600115
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:1624291
G Itm2c integral membrane protein 2C JBrowse link 9 92,916,469 92,930,306 RGD:1624291
RGD:1600115
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 JBrowse link 1 216,293,087 216,630,339 RGD:1624291
RGD:1600115
G Klhl22 kelch-like family member 22 JBrowse link 11 87,646,489 87,718,808 RGD:1600115
RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:1624291
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:1581607
RGD:1624291
RGD:4892338
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 11 84,930,965 85,000,694 RGD:1624291
G Lamp5 lysosomal-associated membrane protein family, member 5 JBrowse link 3 129,012,677 129,031,522 RGD:1624291
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 JBrowse link 1 166,991,474 166,997,045 RGD:1624291
RGD:13792537
RGD:1600115
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 JBrowse link 12 19,573,909 19,577,625 RGD:1624291
RGD:13792537
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 JBrowse link 2 210,034,095 210,039,451 RGD:1624291
RGD:13792537
G Laptm4b lysosomal protein transmembrane 4 beta JBrowse link 7 72,924,911 72,968,099 RGD:1624291
RGD:1600115
G Laptm5 lysosomal protein transmembrane 5 JBrowse link 5 149,015,793 149,069,719 RGD:633121
G Lars leucyl-tRNA synthetase JBrowse link 18 36,524,013 36,579,471 RGD:1624291
RGD:1600115
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:1600115
RGD:1624291
G Lgmn legumain JBrowse link 6 126,282,246 126,308,207 RGD:704328
RGD:1624291
RGD:1600115
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link 6 12,493,182 12,554,482 RGD:2292601
G Lipa lipase A, lysosomal acid type JBrowse link 1 252,816,536 252,959,348 RGD:1600623
RGD:1626385
G Lmbrd1 LMBR1 domain containing 1 JBrowse link 9 30,939,555 31,038,381 RGD:1624291
G LOC100361543 RhoA activator C11orf59-like JBrowse link X 37,261,428 37,262,470 RGD:1600115
RGD:13792537
G LOC100364523 Ctsq protein-like JBrowse link 17 4,045,024 4,050,423 RGD:13792537
G LOC100909593 class II histocompatibility antigen, M alpha chain-like JBrowse link 20 3,935,501 3,938,915 RGD:1624291
G LOC100911881 chitinase domain-containing protein 1-like JBrowse link 1 214,039,367 214,074,663 RGD:1600115
G LOC108348096 ras-related GTP-binding protein B JBrowse link X 19,336,382 19,369,872 RGD:1600115
RGD:13792537
G LOC680121 similar to heat shock protein 8 JBrowse link 11 13,499,168 13,501,271 RGD:13792537
G LOC689412 similar to CG4025-PA JBrowse link 13 65,550,673 65,551,379 RGD:13792537
G Lrba LPS responsive beige-like anchor protein JBrowse link 2 185,590,983 186,110,491 RGD:1624291
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:13792537
RGD:1600115
G Man2b1 mannosidase, alpha, class 2B, member 1 JBrowse link 19 26,196,797 26,216,981 RGD:1625498
G Man2b2 mannosidase, alpha, class 2B, member 2 JBrowse link 14 78,939,959 78,964,961 RGD:2316679
G Manba mannosidase beta JBrowse link 2 240,668,213 240,760,264 RGD:1625498
RGD:13792537
G March1 membrane associated ring-CH-type finger 1 JBrowse link 16 24,998,709 25,856,327 RGD:1624291
G March3 membrane associated ring-CH-type finger 3 JBrowse link 18 51,844,980 51,998,017 RGD:1624291
RGD:1600115
G March8 membrane associated ring-CH-type finger 8 JBrowse link 4 148,285,467 148,398,148 RGD:1624291
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link 20 42,966,140 42,971,838 RGD:9685324
G Mcoln1 mucolipin 1 JBrowse link 12 2,054,629 2,068,682 RGD:1624291
G Mfhas1 malignant fibrous histiocytoma amplified sequence 1 JBrowse link 16 60,120,457 60,208,550 RGD:1624291
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link 2 127,706,618 127,784,129 RGD:1624291
RGD:1600115
G MGC114246 similar to cathepsin R JBrowse link 17 3,924,473 3,929,978 RGD:13792537
G Mlc1 modulator of VRAC current 1 JBrowse link 7 129,949,984 129,970,314 RGD:2326037
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:2296059
G Mpz myelin protein zero JBrowse link 13 89,524,204 89,530,070 RGD:9685788
G Mt1 metallothionein 1 JBrowse link 19 11,301,991 11,303,007 RGD:1624291
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1600115
RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
RGD:1600115
G Naaa N-acylethanolamine acid amidase JBrowse link 14 17,283,262 17,302,364 RGD:1600115
RGD:1624291
G Naga alpha-N-acetylgalactosaminidase JBrowse link 7 123,563,047 123,572,074 RGD:1600115
G Napsa napsin A aspartic peptidase JBrowse link 1 100,577,497 100,589,802 RGD:1624291
RGD:13792537
G Nbr1 NBR1, autophagy cargo receptor JBrowse link 10 89,455,202 89,483,791 RGD:1600115
G Ncstn nicastrin JBrowse link 13 90,451,046 90,467,256 RGD:1624291
G Neu1 neuraminidase 1 JBrowse link 20 4,610,995 4,615,258 RGD:7242745
RGD:13792537
RGD:1624291
RGD:1600115
G Neu4 neuraminidase 4 JBrowse link 9 101,284,902 101,290,558 RGD:1624291
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:1624291
G Npc2 NPC intracellular cholesterol transporter 2 JBrowse link 6 108,467,410 108,488,330 RGD:1624291
G P2ry2 purinergic receptor P2Y2 JBrowse link 1 166,031,228 166,045,423 RGD:2316682
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:2316747
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link 5 126,031,368 126,053,726 RGD:1600115
RGD:1624291
G Pcyox1 prenylcysteine oxidase 1 JBrowse link 4 118,187,133 118,198,029 RGD:1624291
RGD:1600115
G Pla2g15 phospholipase A2, group XV JBrowse link 19 38,129,666 38,146,958 RGD:1304489
RGD:1624291
RGD:1600115
G Plbd1 phospholipase B domain containing 1 JBrowse link 4 170,564,387 170,620,681 RGD:1600115
G Plbd2 phospholipase B domain containing 2 JBrowse link 12 41,600,005 41,619,779 RGD:1624291
G Plekhf1 pleckstrin homology and FYVE domain containing 1 JBrowse link 1 94,609,041 94,616,565 RGD:1624291
RGD:1600115
G Pon2 paraoxonase 2 JBrowse link 4 30,344,705 30,380,119 RGD:2313493
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 5 140,538,260 140,558,163 RGD:1581146
RGD:13792537
RGD:1624291
RGD:8553248
RGD:1600115
G Ppt2 palmitoyl-protein thioesterase 2 JBrowse link 20 4,381,455 4,401,638 RGD:13792537
G Prdx6 peroxiredoxin 6 JBrowse link 13 79,077,567 79,088,113 RGD:1600115
G Prss16 serine protease 16 JBrowse link 17 44,556,039 44,563,826 RGD:1624291
RGD:13792537
G Psap prosaposin JBrowse link 20 29,831,302 29,856,876 RGD:1600115
RGD:1624291
G Psapl1 prosaposin-like 1 JBrowse link 14 79,711,694 79,714,254 RGD:1600115
G Rab12 RAB12, member RAS oncogene family JBrowse link 9 114,683,985 114,709,613 RGD:1624291
RGD:1600115
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:8554557
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
RGD:1600115
G Rab38 RAB38, member RAS oncogene family JBrowse link 1 152,072,716 152,153,449 RGD:1624291
RGD:1600115
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1600115
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
RGD:13792537
G Rab7b Rab7b, member RAS oncogene family JBrowse link 13 48,456,143 48,483,714 RGD:1624291
RGD:13792537
G Rab9a RAB9A, member RAS oncogene family JBrowse link X 29,525,256 29,547,295 RGD:1624291
RGD:1600115
G Ramp3 receptor activity modifying protein 3 JBrowse link 14 86,922,223 86,939,722 RGD:1624291
RGD:1600115
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 5 13,033,918 13,097,369 RGD:1600115
RGD:1624291
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase JBrowse link 10 70,157,621 70,220,618 RGD:1624291
G RGD1308751 similar to Cathepsin L precursor (Major excreted protein) (MEP) JBrowse link 17 4,270,207 4,273,173 RGD:13792537
G RGD1310209 similar to KIAA1324 protein JBrowse link 2 211,243,398 211,323,283 RGD:1624291
G RGD1359108 similar to RIKEN cDNA 3110043O21 JBrowse link 5 50,666,444 50,691,523 RGD:1600115
RGD:1624291
G RGD1564657 similar to cathepsin 1 precursor JBrowse link 17 3,210,130 3,214,421 RGD:13792537
G RGD1564827 similar to cathepsin M JBrowse link 17 4,119,288 4,123,365 RGD:13792537
G Rilp Rab interacting lysosomal protein JBrowse link 10 63,658,451 63,662,428 RGD:1624291
RGD:13792537
G Rnaset2 ribonuclease T2 JBrowse link 1 53,174,879 53,192,048 RGD:1624291
G Rnf152 ring finger protein 152 JBrowse link 13 25,183,295 25,262,785 RGD:1624291
RGD:1600115
G Rptor regulatory associated protein of MTOR, complex 1 JBrowse link 10 108,750,620 109,058,691 RGD:1624291
RGD:1600115
G Rraga Ras-related GTP binding A JBrowse link 5 104,941,067 104,942,662 RGD:1624291
RGD:13792537
RGD:1600115
G RragB Ras-related GTP binding B JBrowse link X 19,085,913 19,135,049 RGD:1624291
RGD:13792537
RGD:1600115
G Rragc Ras-related GTP binding C JBrowse link 5 141,572,536 141,590,784 RGD:1624291
RGD:13792537
G Rragd Ras-related GTP binding D JBrowse link 5 48,224,994 48,260,691 RGD:1624291
RGD:13792537
G RT1-Ba RT1 class II, locus Ba JBrowse link 20 4,066,133 4,070,726 RGD:1624291
RGD:1600115
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:1624291
G RT1-DMa RT1 class II, locus DMa JBrowse link 20 3,935,512 3,938,915 RGD:1624291
G RT1-DMb RT1 class II, locus DMb JBrowse link 20 3,945,383 3,952,838 RGD:1624291
G RT1-DOb RT1 class II, locus DOb JBrowse link 20 4,020,273 4,026,398 RGD:1624291
RGD:1600115
G Sftpb surfactant protein B JBrowse link 4 100,166,855 100,175,941 RGD:1600115
G Sgsh N-sulfoglucosamine sulfohydrolase JBrowse link 10 108,469,312 108,479,094 RGD:1624291
G Shkbp1 Sh3kbp1 binding protein 1 JBrowse link 1 84,154,703 84,168,074 RGD:1600115
G Siae sialic acid acetylesterase JBrowse link 8 40,078,269 40,113,514 RGD:1600115
G Sidt1 SID1 transmembrane family, member 1 JBrowse link 11 61,320,480 61,416,560 RGD:13792537
G Sidt2 SID1 transmembrane family, member 2 JBrowse link 8 50,230,335 50,246,979 RGD:1624291
RGD:13792537
RGD:1600115
G Siglec1 sialic acid binding Ig like lectin 1 JBrowse link 3 123,612,067 123,631,718 RGD:1624291
G Siglec5 sialic acid binding Ig-like lectin 5 JBrowse link 1 98,562,351 98,570,992 RGD:1624291
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:1600115
RGD:1624291
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:1624291
G Slc17a1 solute carrier family 17 member 1 JBrowse link 17 43,473,048 43,504,645 RGD:13792537
G Slc17a2 solute carrier family 17, member 2 JBrowse link 17 43,567,528 43,584,228 RGD:13792537
G Slc17a3 solute carrier family 17 member 3 JBrowse link 17 43,518,760 43,545,160 RGD:13792537
G Slc17a4 solute carrier family 17, member 4 JBrowse link 17 43,452,316 43,472,192 RGD:13792537
G Slc17a5 solute carrier family 17 member 5 JBrowse link 8 85,891,245 85,926,466 RGD:1624225
RGD:13792537
G Slc35f6 solute carrier family 35, member F6 JBrowse link 6 27,095,144 27,106,982 RGD:1624291
G Slc36a1 solute carrier family 36 member 1 JBrowse link 10 40,538,013 40,573,304 RGD:633316
RGD:8554808
RGD:633315
G Slc38a9 solute carrier family 38, member 9 JBrowse link 2 44,512,556 44,592,793 RGD:1600115
RGD:1624291
G Smpd1 sphingomyelin phosphodiesterase 1 JBrowse link 1 170,383,682 170,387,525 RGD:1624291
RGD:13792537
G Snx1 sorting nexin 1 JBrowse link 8 71,745,687 71,786,182 RGD:1624291
RGD:1600115
G Snx14 sorting nexin 14 JBrowse link 8 96,018,943 96,088,405 RGD:1624291
RGD:1600115
G Snx16 sorting nexin 16 JBrowse link 2 93,518,796 93,541,056 RGD:1600115
G Snx2 sorting nexin 2 JBrowse link 18 48,132,386 48,173,974 RGD:1624291
RGD:1600115
G Snx6 sorting nexin 6 JBrowse link 6 75,626,927 75,670,172 RGD:1624291
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:10047299
G Sort1 sortilin 1 JBrowse link 2 211,078,092 211,156,312 RGD:1600115
RGD:1624291
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1624291
RGD:1600115
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:1624291
G Sult1c2 sulfotransferase family 1C member 2 JBrowse link 9 4,654,278 4,685,418 RGD:1600115
G Sult1c2a sulfotransferase family, cytosolic, 1C, member 2a JBrowse link 9 4,152,588 4,168,355 RGD:1600115
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:1624291
RGD:1600115
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:2311145
RGD:1624291
RGD:11041027
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 JBrowse link 1 219,126,687 219,139,466 RGD:1624291
RGD:1600115
G Testin testin gene JBrowse link 17 4,194,796 4,225,376 RGD:13792537
G Tlr7 toll-like receptor 7 JBrowse link X 28,486,836 28,513,004 RGD:1624291
RGD:1600115
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:1624291
G Tmem106b transmembrane protein 106B JBrowse link 4 39,517,679 39,534,491 RGD:1624291
RGD:1600115
G Tmem150a transmembrane protein 150A JBrowse link 4 100,217,986 100,222,131 RGD:13792537
G Tmem150b transmembrane protein 150B JBrowse link 1 72,692,089 72,701,732 RGD:13792537
G Tmem150c transmembrane protein 150C JBrowse link 14 11,094,655 11,166,323 RGD:13792537
G Tmem175 transmembrane protein 175 JBrowse link 14 2,083,745 2,100,006 RGD:1624291
RGD:13792537
RGD:1600115
G Tmem192 transmembrane protein 192 JBrowse link 16 26,620,525 26,642,537 RGD:1624291
G Tmem199 transmembrane protein 199 JBrowse link 10 65,775,721 65,780,293 RGD:1600115
G Tmem59 transmembrane protein 59 JBrowse link 5 126,783,061 126,804,177 RGD:1624291
RGD:1600115
G Tmem9 transmembrane protein 9 JBrowse link 13 52,854,031 52,871,300 RGD:1624291
G Tmem97 transmembrane protein 97 JBrowse link 10 65,811,455 65,820,538 RGD:1624291
RGD:1600115
G Tpcn2 two pore segment channel 2 JBrowse link 1 218,419,182 218,448,902 RGD:1624291
G Tpp1 tripeptidyl peptidase 1 JBrowse link 1 170,588,036 170,594,159 RGD:1600115
RGD:1624291
RGD:8554137
G Trip10 thyroid hormone receptor interactor 10 JBrowse link 9 9,689,214 9,702,353 RGD:1600115
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:1624291
G Tsc2 TSC complex subunit 2 JBrowse link 10 13,962,006 13,996,684 RGD:1600115
RGD:1624291
G Unc13d unc-13 homolog D JBrowse link 10 104,613,907 104,628,664 RGD:1600115
RGD:1624291
G Unc93b1 unc-93 homolog B1, TLR signaling regulator JBrowse link 1 219,172,987 219,183,941 RGD:1624291
RGD:13792537
G Uvrag UV radiation resistance associated JBrowse link 1 163,844,804 164,101,568 RGD:1624291
RGD:1600115
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1624291
G Vma21 vacuolar ATPase assembly factor VMA21 JBrowse link 16 70,142,561 70,151,833 RGD:1624291
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:1624291
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 3 122,947,887 122,969,543 RGD:1624291
G Vps18 VPS18 core subunit of CORVET and HOPS complexes JBrowse link 3 111,097,352 111,108,206 RGD:1624291
RGD:1600115
G Vps26a VPS26 retromer complex component A JBrowse link 20 32,085,465 32,115,310 RGD:1624291
RGD:1600115
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link 12 38,459,816 38,482,903 RGD:1600115
RGD:1624291
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1624291
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
RGD:1600115
G Vps36 vacuolar protein sorting 36 homolog JBrowse link 16 74,719,642 74,743,921 RGD:1624291
RGD:1600115
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1624291
G Wdr45b WD repeat domain 45B JBrowse link 10 110,523,843 110,555,769 RGD:1600115
RGD:1624291
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link 4 66,012,111 66,062,160 RGD:1624291
acrosomal lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata31a5 SPATA31 subfamily A member 5 JBrowse link 17 2,417,700 2,423,486 RGD:1600115
G Zp3r zona pellucida 3 receptor JBrowse link 13 47,286,375 47,331,213 RGD:1600115
autolysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:1624291
G Ftl1 ferritin light chain 1 JBrowse link 1 101,448,190 101,450,034 RGD:1624291
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:1624291
RGD:1600115
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:1624291
RGD:1600115
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:1624291
RGD:1600115
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:1600115
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha JBrowse link 3 150,801,289 150,802,935 RGD:1624291
RGD:1600115
G Map1lc3b microtubule-associated protein 1 light chain 3 beta JBrowse link 19 53,635,449 53,643,970 RGD:1624291
G Ncoa4 nuclear receptor coactivator 4 JBrowse link 16 8,302,950 8,323,294 RGD:1624291
RGD:1600115
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 JBrowse link 18 22,964,121 23,047,896 RGD:1624291
RGD:1600115
G Sqstm1 sequestosome 1 JBrowse link 10 35,704,728 35,716,316 RGD:1624291
RGD:1600115
azurophil granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa11 annexin A11 JBrowse link 16 3,867,193 3,912,043 RGD:1624291
RGD:1600115
G Hexa hexosaminidase subunit alpha JBrowse link 8 64,325,435 64,350,775 RGD:1624291
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:1600115
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
RGD:1600115
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:1580263
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
G Olfm4 olfactomedin 4 JBrowse link 15 62,384,263 62,429,450 RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:1624291
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
RGD:1600115
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1600115
RGD:1624291
azurophil granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prss57 serine protease 57 JBrowse link 7 12,798,310 12,804,668 RGD:1624291
RGD:1600115
G Prtn3 proteinase 3 JBrowse link 7 12,643,712 12,646,951 RGD:1624291
RGD:1600115
azurophil granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1624291
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
RGD:1600115
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1600115
RGD:1624291
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:1624291
RGD:1600115
cytolytic granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gzmb granzyme B JBrowse link 15 35,413,862 35,417,293 RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:1624291
RGD:1600115
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:1624291
RGD:1600115
G Rnf19b ring finger protein 19B JBrowse link 5 147,246,032 147,270,892 RGD:1624291
RGD:13792537
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1600115
RGD:1624291
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Borcs5 BLOC-1 related complex subunit 5 JBrowse link 4 168,396,034 168,466,968 RGD:1624291
RGD:13792537
G Cdip1 cell death-inducing p53 target 1 JBrowse link 10 10,966,819 10,989,937 RGD:1624291
RGD:1600115
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:10412296
G Litaf lipopolysaccharide-induced TNF factor JBrowse link 10 4,753,546 4,763,272 RGD:1624291
RGD:1600115
endolysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hrg histidine-rich glycoprotein JBrowse link 11 81,621,274 81,639,938 RGD:1624291
RGD:13792537
G LOC681544 similar to histidine-rich glycoprotein RGD:13792537
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:1600115
RGD:1624291
endolysosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec16a C-type lectin domain containing 16A JBrowse link 10 5,002,196 5,196,914 RGD:1624291
RGD:13792537
extrinsic component of lysosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
RGD:1600115
integral component of lysosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:1624291
RGD:1600115
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:1600115
RGD:1624291
G Slc38a9 solute carrier family 38, member 9 JBrowse link 2 44,512,556 44,592,793 RGD:1600115
RGD:1624291
lysosomal lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acp2 acid phosphatase 2, lysosomal JBrowse link 3 80,020,346 80,030,365 RGD:1600115
G Cubn cubilin JBrowse link 17 80,584,921 80,807,181 RGD:2317835
G Epdr1 ependymin related 1 JBrowse link 17 47,397,558 47,422,183 RGD:1600115
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:1600115
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
RGD:1600115
G Neu1 neuraminidase 1 JBrowse link 20 4,610,995 4,615,258 RGD:1600115
G Nsg1 neuronal vesicle trafficking associated 1 JBrowse link 14 77,380,264 77,402,007 RGD:13432228
G Nsg2 neuronal vesicle trafficking associated 2 JBrowse link 10 15,867,885 15,928,169 RGD:13432228
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:1600115
G Plbd2 phospholipase B domain containing 2 JBrowse link 12 41,600,005 41,619,779 RGD:1600115
G Scarb2 scavenger receptor class B, member 2 JBrowse link 14 17,064,173 17,115,620 RGD:1624291
RGD:1600115
lysosomal matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059368
RGD:10412301
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:10412301
lysosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1600115
G Abca5 ATP binding cassette subfamily A member 5 JBrowse link 10 98,573,226 98,645,028 RGD:1600115
G Abcb9 ATP binding cassette subfamily B member 9 JBrowse link 12 37,923,974 37,956,678 RGD:1600115
RGD:13792537
RGD:1624291
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
G Abhd6 abhydrolase domain containing 6 JBrowse link 15 18,647,903 18,695,133 RGD:1600115
RGD:1624291
G Acp2 acid phosphatase 2, lysosomal JBrowse link 3 80,020,346 80,030,365 RGD:1600115
G Acpp acid phosphatase, prostate JBrowse link 8 112,838,574 112,884,062 RGD:1600115
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
RGD:1600115
G Anxa6 annexin A6 JBrowse link 10 40,320,581 40,375,605 RGD:1600115
RGD:1624291
G Ap5m1 adaptor related protein complex 5 subunit mu 1 JBrowse link 15 25,933,483 25,955,745 RGD:1600115
G Arl8a ADP-ribosylation factor like GTPase 8A JBrowse link 13 51,972,974 51,981,976 RGD:13792537
G Arl8b ADP-ribosylation factor like GTPase 8B JBrowse link 4 140,837,745 140,881,866 RGD:1624291
RGD:13792537
RGD:1600115
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:1624291
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 JBrowse link 19 37,481,782 37,525,762 RGD:13792537
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 JBrowse link 5 33,843,591 33,892,446 RGD:13792537
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 JBrowse link 5 79,367,663 79,373,843 RGD:1624291
RGD:1600115
G Atraid all-trans retinoic acid-induced differentiation factor JBrowse link 6 26,680,628 26,685,185 RGD:1624291
RGD:1600115
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 JBrowse link 7 3,342,630 3,346,238 RGD:1600115
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 JBrowse link 1 263,913,901 263,920,989 RGD:1600115
G Borcs6 BLOC-1 related complex subunit 6 JBrowse link 10 55,642,070 55,643,924 RGD:1600115
G Bri3 brain protein I3 JBrowse link 12 12,322,247 12,330,929 RGD:1600115
G Cd164 CD164 molecule JBrowse link 20 46,250,418 46,261,994 RGD:1600115
G Cd1d1 CD1d1 molecule JBrowse link 2 186,330,298 186,333,805 RGD:1600115
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:1600115
RGD:1624291
G Cd68 Cd68 molecule JBrowse link 10 56,268,726 56,270,605 RGD:13792537
G Clcn7 chloride voltage-gated channel 7 JBrowse link 10 14,492,844 14,518,167 RGD:1600115
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:1624291
RGD:1600115
G Cln5 CLN5, intracellular trafficking protein JBrowse link 15 93,634,815 93,644,146 RGD:1624291
G Ctns cystinosin, lysosomal cystine transporter JBrowse link 10 59,749,250 59,772,475 RGD:1624291
RGD:13792537
G Ctsd cathepsin D JBrowse link 1 215,541,570 215,553,446 RGD:1624291
RGD:1600115
G Cubn cubilin JBrowse link 17 80,584,921 80,807,181 RGD:1600115
G Cyb561 cytochrome b-561 JBrowse link 10 94,136,993 94,147,567 RGD:13792537
G Cyb561a3 cytochrome b561 family, member A3 JBrowse link 1 226,620,933 226,642,246 RGD:1624291
RGD:13792537
RGD:1600115
G Cybrd1 cytochrome b reductase 1 JBrowse link 3 57,718,496 57,745,749 RGD:13792537
G Depdc5 DEP domain containing 5 JBrowse link 14 83,089,000 83,219,576 RGD:1624291
RGD:13792537
G Dram2 DNA-damage regulated autophagy modulator 2 JBrowse link 2 209,160,901 209,189,641 RGD:1600115
G Gaa glucosidase, alpha, acid JBrowse link 10 108,395,873 108,412,999 RGD:1600115
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
RGD:1600115
G Gimap5 GTPase, IMAP family member 5 JBrowse link 4 78,377,228 78,386,683 RGD:1600115
G Glmp glycosylated lysosomal membrane protein JBrowse link 2 187,697,528 187,701,118 RGD:1600115
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
RGD:1600115
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:1600115
RGD:1624291
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase JBrowse link 16 70,876,557 70,909,443 RGD:1624291
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 JBrowse link 1 265,761,818 265,764,427 RGD:1624291
RGD:13792537
RGD:1600115
G Hpse heparanase JBrowse link 14 10,534,358 10,576,686 RGD:1600115
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link 6 135,107,262 135,112,793 RGD:10412301
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:10412301
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059368
RGD:10412301
G Ifitm3 interferon induced transmembrane protein 3 JBrowse link 1 213,810,712 213,811,821 RGD:1600115
G Itfg2 integrin alpha FG-GAP repeat containing 2 JBrowse link 4 161,730,643 161,744,281 RGD:1624291
RGD:1600115
G Itm2c integral membrane protein 2C JBrowse link 9 92,916,469 92,930,306 RGD:1600115
G Kxd1 KxDL motif containing 1 JBrowse link 16 20,652,863 20,666,581 RGD:1600115
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:1600115
RGD:13792537
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:1581607
RGD:13792537
RGD:1624291
RGD:10412302
RGD:10412301
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 11 84,930,965 85,000,694 RGD:1624291
RGD:13792537
G Lamp5 lysosomal-associated membrane protein family, member 5 JBrowse link 3 129,012,677 129,031,522 RGD:13792537
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 JBrowse link 1 166,991,474 166,997,045 RGD:1600115
G Laptm4a lysosomal protein transmembrane 4 alpha JBrowse link 6 34,042,132 34,059,960 RGD:1624291
RGD:1600115
G Laptm4b lysosomal protein transmembrane 4 beta JBrowse link 7 72,924,911 72,968,099 RGD:1600115
RGD:1624291
G Litaf lipopolysaccharide-induced TNF factor JBrowse link 10 4,753,546 4,763,272 RGD:1624291
G Lmbrd1 LMBR1 domain containing 1 JBrowse link 9 30,939,555 31,038,381 RGD:1600115
G LOC100361543 RhoA activator C11orf59-like JBrowse link X 37,261,428 37,262,470 RGD:1600115
G LOC100909548 cation-dependent mannose-6-phosphate receptor-like JBrowse link X 88,312,689 88,321,836 RGD:1600115
G LOC100909593 class II histocompatibility antigen, M alpha chain-like JBrowse link 20 3,935,501 3,938,915 RGD:1624291
G LOC103692716 heat shock protein HSP 90-alpha JBrowse link 6 135,044,833 135,050,417 RGD:10412301
G M6pr mannose-6-phosphate receptor, cation dependent JBrowse link 4 155,084,755 155,093,896 RGD:1600115
G March1 membrane associated ring-CH-type finger 1 JBrowse link 16 24,998,709 25,856,327 RGD:1624291
RGD:1600115
G March2 membrane associated ring-CH-type finger 2 JBrowse link 7 18,559,301 18,585,351 RGD:1600115
G Mcoln1 mucolipin 1 JBrowse link 12 2,054,629 2,068,682 RGD:7205504
RGD:13792537
G Mcoln2 mucolipin 2 JBrowse link 2 252,018,594 252,068,209 RGD:13792537
G Mcoln3 mucolipin 3 JBrowse link 2 251,930,532 252,007,722 RGD:13792537
G Meak7 MTOR associated protein, eak-7 homolog JBrowse link 19 52,408,700 52,430,198 RGD:1600115
RGD:1624291
G Mios meiosis regulator for oocyte development JBrowse link 4 34,238,370 34,264,015 RGD:1624291
RGD:1600115
G Mmd monocyte to macrophage differentiation-associated JBrowse link 10 77,687,964 77,783,737 RGD:1600115
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:1624291
RGD:1600115
G Ncstn nicastrin JBrowse link 13 90,451,046 90,467,256 RGD:724403
G Neu1 neuraminidase 1 JBrowse link 20 4,610,995 4,615,258 RGD:1600115
G Nprl2 NPR2-like, GATOR1 complex subunit JBrowse link 8 116,297,950 116,301,123 RGD:1624291
RGD:1600115
G Nprl3 NPR3-like, GATOR1 complex subunit JBrowse link 10 15,620,824 15,661,332 RGD:1624291
RGD:1600115
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1624291
RGD:1600115
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 JBrowse link 15 27,852,152 27,855,999 RGD:1624291
RGD:1600115
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 JBrowse link 5 28,395,517 28,442,924 RGD:1624291
RGD:1600115
G Plekhm1 pleckstrin homology and RUN domain containing M1 JBrowse link 10 91,451,890 91,500,675 RGD:1600115
G Pnpla7 patatin-like phospholipase domain containing 7 JBrowse link 3 2,182,191 2,261,890 RGD:1600115
G Pqlc2 PQ loop repeat containing 2 JBrowse link 5 157,744,945 157,759,370 RGD:8553575
RGD:13792537
RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:724403
G Rab12 RAB12, member RAS oncogene family JBrowse link 9 114,683,985 114,709,613 RGD:1600115
G Rnf13 ring finger protein 13 JBrowse link 2 147,853,423 147,948,277 RGD:1624291
RGD:13792537
RGD:1600115
G Rnf152 ring finger protein 152 JBrowse link 13 25,183,295 25,262,785 RGD:1624291
RGD:13792537
RGD:1600115
G Rnf183 ring finger protein 183 JBrowse link 5 78,283,722 78,292,729 RGD:1600115
RGD:1624291
G RT1-CE5 RT1 class I, locus CE5 JBrowse link 20 4,892,702 4,896,993 RGD:1624291
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:1624291
RGD:1600115
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:1624291
G RT1-DMa RT1 class II, locus DMa JBrowse link 20 3,935,512 3,938,915 RGD:1624291
G RT1-DMb RT1 class II, locus DMb JBrowse link 20 3,945,383 3,952,838 RGD:1624291
G Scarb2 scavenger receptor class B, member 2 JBrowse link 14 17,064,173 17,115,620 RGD:632394
RGD:1600115
RGD:1624291
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 4 145,686,186 145,699,577 RGD:1624291
RGD:1600115
G Seh1l SEH1-like nucleoporin JBrowse link 18 63,545,150 63,568,101 RGD:1624291
G Sidt2 SID1 transmembrane family, member 2 JBrowse link 8 50,230,335 50,246,979 RGD:1600115
RGD:1624291
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:1580424
RGD:13792537
RGD:1600115
RGD:1624291
G Slc15a3 solute carrier family 15 member 3 JBrowse link 1 226,896,387 226,912,644 RGD:633591
RGD:13792537
G Slc17a5 solute carrier family 17 member 5 JBrowse link 8 85,891,245 85,926,466 RGD:1624291
RGD:1600115
G Slc26a11 solute carrier family 26 member 11 JBrowse link 10 108,479,105 108,504,188 RGD:1624291
RGD:1600115
G Slc29a3 solute carrier family 29 member 3 JBrowse link 20 30,289,527 30,327,343 RGD:1600115
G Slc2a6 solute carrier family 2 member 6 JBrowse link 3 5,567,729 5,575,144 RGD:1624291
G Slc30a3 solute carrier family 30 member 3 JBrowse link 6 26,629,752 26,650,106 RGD:1600115
G Slc30a4 solute carrier family 30 member 4 JBrowse link 3 114,805,919 114,828,154 RGD:1600115
G Slc35f6 solute carrier family 35, member F6 JBrowse link 6 27,095,144 27,106,982 RGD:1624291
RGD:1600115
G Slc36a1 solute carrier family 36 member 1 JBrowse link 10 40,538,013 40,573,304 RGD:1600115
G Slc3a2 solute carrier family 3 member 2 JBrowse link 1 224,906,566 224,921,029 RGD:1600115
G Slc48a1 solute carrier family 48 member 1 JBrowse link 7 139,271,698 139,279,499 RGD:1624291
RGD:13792537
G Slc49a4 solute carrier family 49 member 4 JBrowse link 11 68,198,709 68,272,766 RGD:1600115
G Slc7a5 solute carrier family 7 member 5 JBrowse link 19 54,693,959 54,722,563 RGD:1600115
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1600115
G Sort1 sortilin 1 JBrowse link 2 211,078,092 211,156,312 RGD:1600115
G Spag9 sperm associated antigen 9 JBrowse link 10 81,693,736 81,827,562 RGD:1624291
RGD:1600115
G Sppl2a signal peptide peptidase-like 2A JBrowse link 3 119,361,651 119,405,453 RGD:1624291
RGD:13792537
G Sppl2b signal peptide peptidase-like 2B JBrowse link 7 11,712,187 11,724,915 RGD:1624291
RGD:13792537
RGD:1600115
G Sppl2c signal peptide peptidase like 2C JBrowse link 10 92,245,434 92,248,758 RGD:13792537
G Stx17 syntaxin 17 JBrowse link 5 63,866,346 63,926,276 RGD:1624291
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:4892614
G Stx8 syntaxin 8 JBrowse link 10 54,512,922 54,753,302 RGD:4892614
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1600115
G Szt2 SZT2 subunit of KICSTOR complex JBrowse link 5 137,192,120 137,238,384 RGD:1624291
RGD:1600115
G Tecpr1 tectonin beta-propeller repeat containing 1 JBrowse link 12 12,374,132 12,403,382 RGD:1624291
RGD:13792537
RGD:1600115
G Tm6sf1 transmembrane 6 superfamily member 1 JBrowse link 1 143,657,607 143,703,829 RGD:1624291
RGD:13792537
G Tm9sf1 transmembrane 9 superfamily member 1 JBrowse link 15 34,314,645 34,322,172 RGD:1600115
G Tmbim1 transmembrane BAX inhibitor motif containing 1 JBrowse link 9 81,569,289 81,586,469 RGD:1624291
RGD:1600115
G Tmem106b transmembrane protein 106B JBrowse link 4 39,517,679 39,534,491 RGD:1600115
RGD:13792537
RGD:1624291
G Tmem150c transmembrane protein 150C JBrowse link 14 11,094,655 11,166,323 RGD:1600115
G Tmem165 transmembrane protein 165 JBrowse link 14 34,503,037 34,528,262 RGD:1624291
RGD:1600115
G Tmem175 transmembrane protein 175 JBrowse link 14 2,083,745 2,100,006 RGD:1600115
G Tmem192 transmembrane protein 192 JBrowse link 16 26,620,525 26,642,537 RGD:1624291
RGD:13792537
G Tmem63a transmembrane protein 63a JBrowse link 13 99,219,585 99,253,176 RGD:1624291
RGD:1600115
G Tmem79 transmembrane protein 79 JBrowse link 2 187,701,522 187,706,452 RGD:1624291
RGD:13792537
RGD:1600115
G Tpcn1 two pore segment channel 1 JBrowse link 12 41,507,784 41,566,847 RGD:1600115
RGD:13792537
RGD:1624291
G Tpcn2 two pore segment channel 2 JBrowse link 1 218,419,182 218,448,902 RGD:1624291
RGD:1600115
G Treml4 triggering receptor expressed on myeloid cells-like 4 JBrowse link 9 14,668,691 14,707,122 RGD:1624291
G Trim23 tripartite motif-containing 23 JBrowse link 2 34,255,300 34,288,140 RGD:1624291
RGD:13792537
RGD:1600115
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:1624291
RGD:1600115
G Tspan1 tetraspanin 1 JBrowse link 5 135,019,206 135,032,412 RGD:1600115
G Uba1 ubiquitin-like modifier activating enzyme 1 JBrowse link X 1,723,135 1,745,147 RGD:1624291
RGD:1600115
G Ubxn6 UBX domain protein 6 JBrowse link 9 10,995,516 11,000,643 RGD:1624291
RGD:1600115
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:4892614
RGD:8554473
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:4892614
RGD:1624291
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:1600115
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 3 122,947,887 122,969,543 RGD:1600115
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link 12 38,459,816 38,482,903 RGD:1600115
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1600115
G Vps39 VPS39 subunit of HOPS complex JBrowse link 3 112,087,213 112,125,307 RGD:1624291
RGD:13792537
G Vps41 VPS41 subunit of HOPS complex JBrowse link 17 48,643,754 48,810,633 RGD:1624291
RGD:1600115
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link 6 102,340,261 102,353,612 RGD:1600115
RGD:1624291
G Wdr24 WD repeat domain 24 JBrowse link 10 15,191,078 15,195,860 RGD:1624291
RGD:1600115
G Wdr59 WD repeat domain 59 JBrowse link 19 43,651,686 43,714,391 RGD:1624291
RGD:1600115
G Wdr81 WD repeat domain 81 JBrowse link 10 62,273,817 62,287,213 RGD:1624291
RGD:1600115
mast cell granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:8548783
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7421660
G Btk Bruton tyrosine kinase JBrowse link X 105,360,922 105,390,580 RGD:1600115
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:1600115
G Cplx2 complexin 2 JBrowse link 17 10,756,871 10,828,811 RGD:1600115
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:1624291
RGD:1600115
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1600115
G Lat linker for activation of T cells JBrowse link 1 197,765,644 197,770,669 RGD:1600115
G Lat2 linker for activation of T cells family, member 2 JBrowse link 12 25,114,099 25,128,381 RGD:1600115
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link 5 16,526,058 16,642,648 RGD:1600115
G Mcpt3 mast cell peptidase 3 JBrowse link 15 34,793,629 34,796,229 RGD:69811
G Milr1 mast cell immunoglobulin-like receptor 1 JBrowse link 10 94,944,243 94,961,795 RGD:1624291
RGD:1600115
G Nppa natriuretic peptide A JBrowse link 5 164,808,407 164,809,716 RGD:1579983
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1600115
G Pla2g3 phospholipase A2, group III JBrowse link 14 83,724,828 83,730,614 RGD:1600115
G Rasgrp1 RAS guanyl releasing protein 1 JBrowse link 3 108,984,029 109,044,420 RGD:1600115
G Srgn serglycin JBrowse link 20 32,120,317 32,158,071 RGD:1624291
RGD:1600115
G Tac4 tachykinin 4 JBrowse link 10 83,081,168 83,089,487 RGD:1600115
G Tpsab1 tryptase alpha/beta 1 JBrowse link 10 14,701,253 14,703,668 RGD:1624291
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta JBrowse link 7 75,573,553 75,598,295 RGD:1600115
phagolysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:1624291
RGD:1600115
phagolysosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hrg histidine-rich glycoprotein JBrowse link 11 81,621,274 81,639,938 RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:1624291
RGD:1600115
secondary lysosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crhbp corticotropin releasing hormone binding protein JBrowse link 2 25,141,471 25,153,334 RGD:5490549

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18374
    organelle 11704
      membrane-bounded organelle 10401
        intracellular membrane-bounded organelle 9697
          vacuole 531
            lytic vacuole 432
              lysosome 432
                UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex 0
                cytolytic granule + 5
                endolysosome + 4
                lysosomal glycocalyx 0
                lysosomal lumen + 15
                lysosomal membrane + 164
                lysosomal multienzyme complex 0
                mast cell granule 20
                megasome 0
                primary lysosome + 16
                secondary lysosome + 14
Path 2
Term Annotations click to browse term
  cellular_component 18374
    cell 16254
      cell part 16185
        intracellular 13048
          intracellular part 13048
            cytoplasm 10253
              cytoplasmic part 8207
                vacuole 531
                  lytic vacuole 432
                    lysosome 432
                      UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex 0
                      cytolytic granule + 5
                      endolysosome + 4
                      lysosomal glycocalyx 0
                      lysosomal lumen + 15
                      lysosomal membrane + 164
                      lysosomal multienzyme complex 0
                      mast cell granule 20
                      megasome 0
                      primary lysosome + 16
                      secondary lysosome + 14
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.